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MetabolomicsMetabolomic changes in Mycobacterium avium subsp. paratuberculosis (MAP) challenged Holstein-Friesian cattle suggest the role of serum amino acids as indicators of immune system activation

INTRODUCTION: Paratuberculosis, commonly known as Johne’s disease, is a chronic intestinal infection of ruminants caused by Mycobacterium avium subspecies paratuberculosis (MAP). Clinical signs, including reduced milk yields, weight loss and diarrhoea, are typically abse...

2022-02-23 | MTBLS2963 | MetaboLights
MetabolomicsMap of microbially induced metabolic changes across diverse body sites in mice - Mouse Data
Not available
ORGANISM(S): Mus musculus 
ST002465 | MetabolomicsWorkbench
MetabolomicsMap of microbially induced metabolic changes across diverse body sites in mice - Bacterial culture data
Not available
ORGANISM(S): Several mouse commensals 
ST002289 | MetabolomicsWorkbench
MetabolomicsA metabolic map of the DNA damage response identifies PRDX1 in nuclear ROS scavenging and aspartate synthesis
Not available
ORGANISM(S): Homo sapiens 
ST002234 | MetabolomicsWorkbench
TranscriptomicsISBP mapping in the physical map of the Triticum aestivum chromosome arm 1BL
To improve the resources for map-based cloning and sequencing of the wheat genome, we established a physical map of the wheat chromosome 1BL with a high density of markers by hybridizing the newly developed INRA GDEC Triticum aestivum NimbleGen 12x17k ISBP microarray (A-MEXP-2312) with BAC pools fro...
ORGANISM(S): Triticum aestivum 
2013-06-01 | E-MTAB-1657 | biostudies-arrayexpress
Transcriptomicsgene mapping in the physical map of the Triticum aestivum chromosome arm 1BL
To improve our understanding of the organization and evolution of the wheat gene space, we established the first map of genes of the wheat chromosome 1BL by hybridizing the newly developed INRA GDEC Triticum aestivum NimbleGen 12x40k unigenes microarray (A-MEXP-2314) with BAC pools from the 1BL phys...
ORGANISM(S): Triticum aestivum 
2013-06-01 | E-MTAB-1650 | biostudies-arrayexpress
GenomicsThe Nucleosome Map of the Mammalian Liver
We report the genome-wide map of nucleosome positions in the mouse liver, with emphasis on transcriptional start sites, CpG islands, Foxa2 binding sites, and their correlation with gene expression. Despite the heterogeneity of liver tissue, we could clearly discern the nucleosome pattern of the pred...
ORGANISM(S): Mus musculus 
2011-04-30 | E-GEOD-26729 | biostudies-arrayexpress
TranscriptomicsTranscription map of wheat chromosome 3B
To improve our understanding of the organization and regulation of the wheat gene space, we established the first transcription map of a wheat chromosome (3B) by hybridizing the newly developed INRA GDEC Triticum aestivum NimbleGen 12x40k unigenes microarray with BAC pools from a new version of the ...
ORGANISM(S): Triticum aestivum 
2011-11-03 | E-TABM-1095 | biostudies-arrayexpress
TranscriptomicsA high-resolution map of active promoters in the human genome
Our ability to understand the control logic embedded in the human genome is limited by a lack of accurate information of the promoter sequences for most genes. Promoters are a unique class of control sequences, serving as the binding sites for both sequence-specific factors and the general transcri...
ORGANISM(S): Homo sapiens 
2010-07-01 | E-GEOD-2672 | biostudies-arrayexpress
Transcriptomicsgene mapping in the physical map of the Triticum aestivum chromosome arm 1BS
To improve our understanding of the organization and evolution of the wheat gene space, we established the first map of genes of the wheat chromosome 1BS by hybridizing the newly developed INRA GDEC Triticum aestivum NimbleGen 12x40k unigenes microarray (A-MEXP-2314) with 3D-pools of MTP BACs of fro...
ORGANISM(S): Triticum aestivum 
2013-12-06 | E-MTAB-1912 | biostudies-arrayexpress
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