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TranscriptomicsRNA sequencing of marmoset embryonic development
Transcriptional profiling of common marmoset embryo stages spanning E5.0 to E7.0 was performed by RNA-seq.
ORGANISM(S): Callithrix jacchus 
2015-11-05 | E-MTAB-2959 | biostudies-arrayexpress
TranscriptomicsSingle-cell RNA sequencing of marmoset embryonic development
Transcriptional profiling of common marmoset embryo stages spanning zygote to late preimplantation blastocyst was performed by single-cell RNA-seq.
ORGANISM(S): Callithrix jacchus 
2018-11-01 | E-MTAB-7078 | biostudies-arrayexpress
TranscriptomicsNon-viral generation of marmoset monkey iPS cells by a six-factor-in-one-vector approach
The analysis compares primary fibroblasts initially used for reprogramming, established marmoset ES cells and a marmoset iPS cell line which was generated witha non-viral approach using a six-factor-in-one-vector approach Cells were grown under standard conditions for marmoset pluripotent stem cell...
ORGANISM(S): Callithrix jacchus 
2015-04-08 | E-GEOD-64966 | biostudies-arrayexpress
TranscriptomicsAlternative Capture of Noncoding RNAs or Protein-Coding Genes by Herpesviruses to Alter Host T-Cell Function
In marmoset T cells transformed by Herpesvirus saimiri (HVS), a viral U-rich noncoding RNA, HSUR 1, specifically mediates degradation of host microRNA-27 (miR-27). High-throughput sequencing of RNA after crosslinking immunoprecipitation (HITS-CLIP) identified mRNAs targeted by miR-27 as enriched in ...
ORGANISM(S): Callithrix jacchus 
2014-09-01 | E-GEOD-55185 | biostudies-arrayexpress
TranscriptomicssnRNA-seq of developing marmoset female and male gonads across development
This study used droplet-based snATAC-seq to profile gene expression of 45,103 nuclei in the developing marmoset female and male gonads across several timepoints during development, from gestational day (GD) 92 until 3 weeks after birth (wo). Embryos were collected via hysterotomy. A specialized vet...
ORGANISM(S): Callithrix jacchus 
2025-06-30 | E-MTAB-15025 | biostudies-arrayexpress
TranscriptomicsPrimed and naïve marmoset pluripotent stem cells as a model for primate development
We derived primed pluripotent stem cell cultures (PSCs) from marmoset blastocyst using conventional human PSC culture conditions (KSR/bFGF on feeders). Naïve marmoset PSCs were established by chemical resetting. In addition, we generated forebrain-derived cells from the frontal lobe of a marmoset ne...
ORGANISM(S): Callithrix jacchus 
2022-02-14 | E-MTAB-9349 | biostudies-arrayexpress
TranscriptomicsHuman and marmoset trophoblast stem cells differ in signalling requirements and recapitulate divergent modes of trophoblast invasion
We derive experimental conditions for the derivation of marmoset trophoblast like cells. Marmoset naïve PSC form extraembryonic mesoderm in human TSC conditions, whilst TGFβ/NODAL, FGF/ERK and WNT signalling control marmoset peri- and postimplantation trophoblast identity.
ORGANISM(S): Callithrix jacchus 
2024-11-21 | E-MTAB-12463 | biostudies-arrayexpress
TranscriptomicsSmall RNA and gene expression profile in the adult testes of the common marmoset
Small RNAs mediate gene silencing by binding Argonaute/Piwi proteins to regulate target RNAs. Here we describe small RNA profiling of the adult testes of Callithrix jacchus, the common marmoset. The most abundant class of small RNAs in the adult testis was piRNAs, while 353 novel miRNAs but few endo...
ORGANISM(S): Callithrix jacchus 
2014-06-01 | E-GEOD-52927 | biostudies-arrayexpress
TranscriptomicsDNA methylation in marmoset primed and naive pluripotent stem cells, and trophoblast stem cells
Bisulfite sequencing on bulk populations of marmoset naïve pluripotent stem cells (PSC), primed PSC, and trophoblsat stem cells.
ORGANISM(S): Callithrix jacchus 
2024-11-21 | E-MTAB-12453 | biostudies-arrayexpress
TranscriptomicssnATAC-seq of developing marmoset female and male gonads across development
This study used droplet-based snATAC-seq to profile the chromatin accessibility landscape of 22,032 nuclei in the developing marmoset female and male gonads across several timepoints during development, from gestational day (GD) 74 until 3 weeks after birth (wo). Embryos were collected via hysteroto...
ORGANISM(S): Callithrix jacchus 
2025-06-30 | E-MTAB-15024 | biostudies-arrayexpress
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