Marques H H - OmicsDI

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Unknown (1389)
Proteomics (44)
Transcriptomics (31)
Metabolomics (13)
Genomics (1)

Organisms

Homo sapiens (30)
Mus musculus (14)
Saccharomyces cerevisiae (5)
Xylella fastidiosa (2)
Drosophila melanogaster (2)
Rattus norvegicus (2)
Caenorhabditis elegans (2)
Gorilla gorilla gorilla (1)
Pan troglodytes (1)
Canis lupus familiaris (1)
Arabidopsis thaliana (1)
502780 (1)
Equidae (1)
Eucalyptus grandis (1)
Homo (1)
Hypsibius exemplaris (1)
Mayaro virus (strain Brazil) (1)
Metarhizium anisopliae (1)
Proboscidea (1)
Staphylococcus aureus (1)
Trichonephila clavipes (1)
Trypanosoma brucei (1)
Tupanvirus (1)

Repository

pride (41)
biostudies-arrayexpress (31)
MetaboLights (12)
MassIVE (3)
GNPS (1)
ENA (1)

Tissue

Cell culture (5)
Brain (3)
Whole body (3)
Liver (2)
Tooth enamel (2)
Adipocyte (1)
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Dentin (1)
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Epithelial cell of proximal tubule (1)
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Fungal cell (1)
Heart (1)
Kidney (1)
Leaf (1)
Macrophage (1)
Mesenteric adipose tissue (1)
Permanent cell line cell (1)
Plant cell (1)
Prostate cancer cell line (1)
Regional part of brain (1)
Silk gland (1)
Stem cell (1)
Stomach (1)
Subcutaneous adipose tissue (1)
Tear (1)
Tooth (1)
Urine (1)

Disease

Acute leukemia (1)
Alzheimer's disease (1)
Brain cancer (1)
Breast cancer (1)
COVID-19 (1)
Colorectal cancer (1)
Diabetes (1)
Gastric adenocarcinoma (1)
Metabolic dysfunction-associated steatotic liver disease (1)
Paracoccidioidomycosis (1)
Parkinson's disease (1)
Prostate cancer (1)
Renal clear cell carcinoma (1)
Retinopathy (1)

Technology Type

Mass Spectrometry (41)
Shotgun proteomics (20)
Mass spectrometry (11)
Bottom-up proteomics (9)
Data-dependent acquisition (6)
Gel-based experiment (4)
SWATH MS (4)
Affinity purification coupled with mass spectrometry proteomics (3)
HDMSE (2)
Mass spectrometry assay (1)
All-ion fragmentation (1)
Data-independent acquisition (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (7)
MaXis (2)
Liquid Chromatography MS - negative - reverse phase (2)
Illumina Genome Analyzer II (1)
Scanning hardware (1)
NextSeq 550 (1)
Illumina HiSeq 2000 (1)
LTQ FT (1)
LTQ Orbitrap Elite (1)
Orbitrap Fusion (1)
Capillary electrophoresis MS - negative (1)
Capillary electrophoresis MS - positive (1)
Exactive (Thermo Scientific) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive (1)
Q Exactive (1)

Publication Date

2023 (13)
2018 (8)
2024 (8)
2025 (8)
2015 (6)
2010 (6)
2014 (5)
2026 (5)
2022 (5)
2020 (4)
2012 (4)
2021 (4)
2016 (3)
2011 (3)
2008 (2)
2006 (2)
2013 (1)
2019 (1)

CHEBI ID

CHEBI:16010 (3)
CHEBI:16027 (3)
CHEBI:16359 (3)
CHEBI:17750 (3)
CHEBI:18012 (3)
CHEBI:28865 (3)
CHEBI:30769 (3)
CHEBI:32816 (3)
CHEBI:35038 (3)
CHEBI:64563 (3)
CHEBI:139138 (2)
CHEBI:143243 (2)
CHEBI:143745 (2)
CHEBI:143757 (2)
CHEBI:15354 (2)
CHEBI:15724 (2)
CHEBI:15741 (2)
CHEBI:15846 (2)
CHEBI:15891 (2)
CHEBI:15978 (2)
CHEBI:16108 (2)
CHEBI:16119 (2)
CHEBI:16235 (2)
CHEBI:16244 (2)
CHEBI:16335 (2)
CHEBI:16344 (2)
CHEBI:16414 (2)
CHEBI:16449 (2)
CHEBI:16610 (2)
CHEBI:16708 (2)

Metabolite Name

Cholic acid (3)
Succinate (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
9(10)-EpOME (2)
AMP (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
Dibutyl phthalate (DBP) (2)
Elaidic acid (2)
Fumarate (2)
L-Valine (2)
Lyso-PC(16:0) (2)
Monoolein (2)
NAD+ (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Pyruvate (2)
Spermidine (2)
Taurocholic acid (2)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
1,3,5-triprop-2-enyl-1,3,5-triazaperhydroine-2,4,6-trione (1)
1,4a-dimethyl-9-oxo-7-propan-2-yl-3,4,10,10a-tetrahydro-2H-phenanthrene-1-carboxylic acid (1)
1-(1-Propenylthio)propyl propyl disulfide (1)
1-(9Z-Octadecenoyl)-sn-glycero-3-phosphocholine (1)
1-Amino-propan-2-ol (1)
1-Aminocyclohexanecarboxylic acid (1)
1-Heptadecanoyl-sn-glycero-3-phosphocholine (1)

First Public Date

2026 (1)

Modification

-17.026549 (1)
15.994915 (1)
3x(2)H labeled N6-acetyl-L-lysine (1)
42.010565 (1)
47.036105 (1)
58.005479 (1)

Study type

Transcription profiling by array (19)
RNA-seq of coding RNA (5)
Comparative genomic hybridization by array (2)
MicroRNA profiling by array (2)
Unknown experiment type (1)
Cell line - One-color microarray (1)
Methylation profiling by array (1)

Release Date

2025 (169)
2023 (159)
2022 (156)
2021 (144)
2024 (135)
2020 (122)
2019 (98)
2018 (82)
2017 (78)
2016 (65)
2015 (43)
2014 (37)
2012 (27)
2026 (26)
2013 (21)
2010 (17)
2011 (9)
2008 (9)
2009 (9)
2005 (4)
2007 (3)
2006 (2)
2004 (2)
2003 (2)
2001 (1)

Lab affiliation

Department of Radiology Canary Center at Stanford for Cancer Early Detection Stanford School of Medicine Stanford University (3)
Biochemistry and Molecular Biology, The Institute for Medical Research Israel-Canada (IMRIC). School of Medicine. The Hebrew University of Jerusalem, Israel. (2)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
CNPEM (1)
Canary Center at Stanford for Cancer Early Detection Department of Radiology School of Medicine Stanford University (1)
Center for Neuroscience and Cell Biology (1)
Center for Neuroscience and Cell Biology – University of Coimbra (1)
Centre for Medicines Discovery, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Roosevelt Drive, Oxford, UK. Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Roosevelt Drive, Oxford, UK. (1)
Department of Biochemistry and Tissue Biology, Institute of Biology, University of Campinas, Campinas, SP, Brazil (1)
Department of Biology University of York Heslington York YO10 5DD (1)
Department of Biomedical and Pharmaceutical Sciences, College of Pharmacy,University of Rhode Island, Kingston, RI, 02881, (1)
Department of Cellular and Molecular Medicine, University of Copenhagen (1)
Department of Radiology Stanford University School of Medicine Canary Center at Stanford for Cancer Early Detection (1)
Dysmetabolism in Brain Diseases Lab, CEDOC, NOVA Medical School, Universidade NOVA de Lisboa, Rua CÃƒÂ¢mara Pestana, NÃ‚Âº 6, EdifÃƒÂcio CEDOC II, Office 2.27, 1150-082 Lisboa, Portugal (1)
EDyP (1)
ESALQ-USP (1)
Faculdade de Farmácia; Centro de Biotecnologia, Federal University of Rio Grande do Sul (UFRGS), Porto Alegre/RS, Brazil (1)
Full Professor Cardiovascular Proteomics Laboratory & Proteomics Unit Vascular Pathophysiology Area Centro Nacional de Investigaciones Cardiovasculares Melchor Fernández Almagro núm. 3 28029 Madrid (1)
Head of the CRG/UPF Proteomics Unit (1)
Institute for Biochemistry and Molecular Biology, Medical Faculty, University of Bonn, 53115 Bonn, Germany (1)
Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa; Oeiras, Portugal. (1)
Laboratory of Pharmacology and Experimental Therapeutics, Institute for Biomedical Imaging and Life Sciences (IBILI), Faculty of Medicine and CNC.IBILI Research Consortium, University of Coimbra, Coimbra, Portugal (1)
Laboratory of Systems Pharmacology, Harvard Program in Therapeutic Science, Harvard Medical School, Armenise 132, 200 Longwood Avenue, Boston, MA 02115, USA Department of Neurology, Massachusetts General Hospital, 114 16th Street, Charlestown, MA 02129, USA (1)
Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V., Otto-Hahn-Str. 6b, 44227 Dortmund, Germany (1)
Loschmidt Laboratories Department of Experimental Biology & RECETOX Faculty of Science, Masaryk University (1)
Masaryk Memorial Cancer Institute, Zluty kopec, Brno, Czech Republic (1)
Medical Biotechnology Center, VIB, B-9000 Ghent, Belgium, Department of Biochemistry, Ghent University, B-9000 Ghent, Belgium. (1)
Molecular Physiology, Leiden Institute for Chemistry, Leiden University, The Netherlands (1)
National Laboratory of Biosciences (LNBio), CNPEM, Brazil. (1)
PRBB, Institute of Evolutionary Biology (UPF-CSIC), Dr. Aiguader 88, 8003 Barcelona, Spain Catalan Institution of Research and Advanced Studies (ICREA), Passeig de Lluís Companys, 23, 08010, Barcelona, Spain Centro Nacional de Análisis Genómico (CNAG), Baldiri i Reixac 4, 08028 Barcelona, Spain Institut Català de Paleontologia Miquel Crusafont, Universitat Autònoma de Barcelona Edifici ICTA-ICP, c/ Columnes s/n, 08193 Cerdanyola del Vallès, Barcelona, Spain (1)

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24-h Movement Guidelines and Overweight and Obesity Indicators in Toddlers, Children and Adolescents: A Systematic Review and Meta-Analysis.

Not available

S-EPMC10185721 | biostudies-literature

A possible role of IL-1RN gene polymorphism in the outcome of gastrointestinal diseases associated with H. pylori infection.

Not available

S-EPMC3634316 | biostudies-literature

Temperature-induced formation of Pd nanoparticles in heterogeneous nanobiohybrids: application in C-H activation catalysis.

Not available

S-EPMC9846520 | biostudies-literature

Proteomics reveals PFOS-induced alteration of lipid utilization and xenobiotic metabolism in a model of PFOS-augmented diet-induced fatty liver

Perfluorooctanesulfonic acid (PFOS) is a persistent, bio-accumulative pollutant that has been used for the last 60+ years in numerous industrial and commercial applications. In mice, PFOS administration is known to induce hepatomegaly and hepatic steatosis. The aim of the present study was to evalua...

ORGANISM(S): Mus musculus (Mouse)

2020-09-30 | PXD016161 | Pride

Evaluation of Aktiia cuffless blood pressure monitor across 24-h, daytime, and night-time measurements versus ambulatory monitoring: a prospective, single-centre observational study.

Not available

S-EPMC11872257 | biostudies-literature

Meeting 24-h movement guidelines and markers of adiposity in adults from eight Latin America countries: the ELANS study.

Not available

S-EPMC9256603 | biostudies-literature

Emergence of High-Level Colistin Resistance in an Acinetobacter baumannii Clinical Isolate Mediated by Inactivation of the Global Regulator H-NS.

Not available

S-EPMC6021671 | biostudies-literature

Games academics play and their consequences: how authorship, h-index and journal impact factors are shaping the future of academia.

Not available

S-EPMC6939250 | biostudies-literature

Genome comparison between clinical and environmental strains of Herbaspirillum seropedicae reveals a potential new emerging bacterium adapted to human hosts.

Not available

S-EPMC6679464 | biostudies-literature

Identification of spidroin proteins in the silk glands of Nephila clavipes spiders

Glands were frozen at -80 ºC immediately after being retrieved and stored under this condition until initiating the proteomics analysis protocol. Glands were washed with cold PBS and immersed in 120 l of homogenization buffer (50 mM Tris-HCl, pH 6.8, 10 mM DTT, 4% (w/v) SDS). Glands were boiled for ...

ORGANISM(S): Trichonephila clavipes

2022-12-07 | PXD023141 | Pride

Spider silk proteomics liquid chromatography-tandem mass spectrometry silk gut

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1478 Results

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