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MetabolomicsLinking root exudates to functional plant traits
Primary and secondary metabolites exuded by plant roots have mainly been studied under laboratory conditions, while knowledge of root exudate patterns of plants growing in natural communities is very limited. Focusing on ten common European grassland plant species, we asked to which degree exuded me...
2022-02-11 | MTBLS687 | MetaboLights
TranscriptomicsTranscription analysis of E. coli processed at persistent and decreasing glucose limitation in a fed-batch cultivation
A time series of whole-genome transcription profiling of E. coli K-12 W3110 was performed to study the dynamic physiological response of E. coli K-12 W3110 to limited carbon conditions. cDNA from eight time intervals after glucose limitation, representing different stages of glucose depletion, along...
ORGANISM(S): Escherichia coli W3110 
2010-05-19 | E-GEOD-10307 | biostudies-arrayexpress
MetabolomicsComputational workflow to study the seasonal variation of secondary metabolites in nine different bryophytes
In Eco-Metabolomics, non-model organisms are typically studied in their natural environment and relations are made between biochemistry and ecological function. Current challenges when processing such data involve, among others, complex ecological experiment designs, peak detection parameter setting...
2018-06-18 | MTBLS520 | MetaboLights
MetabolomicsUntargeted Metabolite Profiling (LC-MS) of Root Exudates of Grassland Species

Plants exude a diverse cocktail of metabolites into the soil as response to exogenous and endogenous influences. So far, root exudates have only been studied under artificial conditions due to methodological difficulties. In this study, each five perennial grass and forb species were investigated...

2020-06-18 | MTBLS865 | MetaboLights
UnknownThe role of metabolic syndrome in osteoarthritis development: Is obesity the key driver?
Not available
S-EPMC12861020 | biostudies-literature
ProteomicsCharacterization of peptide-protein relationships in protein ambiguity groups via bipartite graphs (data set D1)
Motivation: In bottom-up mass spectrometry proteins are enzymatically digested before measurement. The relationship between proteins and peptides can be represented by bipartite graphs that can be split into connected components. This representation is useful to aid protein inference and quantificat...
ORGANISM(S): Mus musculus (Mouse) 
2021-07-30 | PXD024684 | Pride
Mus musculus Spike-in Label-free 
MetabolomicsUntargeted Metabolite Profiling (GC-MS) of Root Exudates of Grassland Species

Plants exude a diverse cocktail of metabolites into the soil as response to exogenous and endogenous influence. So far, root exudates have only been studied under artificial conditions due to methodological difficulties. In this study, each five perennial grass and forb species were investigated ...

2020-06-18 | MTBLS866 | MetaboLights
ProteomicsObservations from the proteomics bench - Quality Assessment / Experiment Reproducibility - EXIII2023
These project contains 10 technical replicate measurements of a standard sample, that is used to assess the quality control and instrument performance in between real project samples. It was used in a viewpoint paper to illustrate the challenges. The samples were measured with three different machin...
ORGANISM(S): Homo sapiens (Human) 
2024-02-28 | PXD048840 | Pride
Quality control Standard samples 
ProteomicsObservations from the proteomics bench - Quality Assessment / Experiment Reproducibility - QExHF2019
These project contains 10 technical replicate measurements of a standard sample, that is used to assess the quality control and instrument performance in between real project samples. It was used in a viewpoint paper to illustrate the challenges. The samples were measured with three different machin...
ORGANISM(S): Homo sapiens (Human) 
2024-02-28 | PXD048839 | Pride
Quality control Standard samples 
ProteomicsObservations from the proteomics bench - Quality Assessment / Experiment Reproducibility - PROETD2015
These project contains 10 technical replicate measurements of a standard sample, that is used to assess the quality control and instrument performance in between real project samples. It was used in a viewpoint paper to illustrate the challenges. The samples were measured with three different machin...
ORGANISM(S): Homo sapiens (Human) 
2024-02-28 | PXD048836 | Pride
Quality control Standard samples 
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