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TranscriptomicsChromatin immunoprecipitation to identify H-NS and RNA polymerase (beta-subunit) binding sites on the Salmonella typhimurium chromosome
Chromatin immunoprecipitation experiment to identify H-NS and RNA polymerase (beta-subunit) binding sites on the Salmonella Typhimurium chromosome
ORGANISM(S): Salmonella typhimurium 
2006-08-17 | E-MEXP-806 | biostudies-arrayexpress
ProteomicsAdvanced fiber type-specific protein profiles derived from adult murine skeletal muscle
Skeletal muscle is a heterogeneous tissue consisting of blood vessels, connective tissue, and muscle fibers. The last are highly adaptive and can change their molecular composition depending on external and internal factors, such as exercise, age, and disease. Thus, examination of the skeletal muscl...
ORGANISM(S): Mus musculus (Mouse) 
2021-06-07 | PXD025359 | Pride
Laser microdissection Proteomics Neuromuscular disorders Skeletal muscle Fiber types 
ProteomicsCharacterization of cerebrospinal fluid via data-independent acquisition mass spectrometry
Cerebrospinal fluid (CSF) is in direct contact with the brain and serves as a valuable specimen to examine neurodegenerative diseases in order to identify suitable diagnostic biomarkers. In the field of neuroproteomics the most popular mass spectrometry-based strategy for biomarker discovery studies...
ORGANISM(S): Homo sapiens (Human) 
2018-09-17 | PXD009624 | Pride
Cerebrospinal fluid Lc-ms Spectral library Data-independent acquisition 
ProteomicsCharacterization of cerebrospinal fluid via data-independent acquisition mass spectrometry
Cerebrospinal fluid (CSF) is in direct contact with the brain and serves as a valuable specimen to examine diseases of the central nervous system through analyzing its components. These include the analysis of metabolites, cells as well as proteins. For identifying new suitable diagnostic protein bi...
ORGANISM(S): Homo sapiens (Human) 
2018-09-17 | PXD010708 | Pride
Cerebrospinal fluid Dia Proteomics Data-independent acquisition mass spectrometry Csf Spectral library 
ProteomicsCharacterization of cerebrospinal fluid via data-independent acquisition mass spectrometry
Cerebrospinal fluid (CSF) is in direct contact with the brain and serves as a valuable specimen to examine neurodegenerative diseases in order to identify suitable diagnostic biomarkers. In the field of neuroproteomics the most popular mass spectrometry-based strategy for biomarker discovery studies...
ORGANISM(S): Homo sapiens (Human) 
2019-02-14 | PXD009623 | Pride
Cerebrospinal fluid Lc-ms Spectral library Data-independent acquisition 
ProteomicsCharacterization of cerebrospinal fluid via data-independent acquisition mass spectrometry
Cerebrospinal fluid (CSF) is in direct contact with the brain and serves as a valuable specimen to examine diseases of the central nervous system through analyzing its components. These include the analysis of metabolites, cells as well as proteins. For identifying new suitable diagnostic protein bi...
ORGANISM(S): Homo sapiens (Human) 
2018-09-17 | PXD010690 | Pride
Cerebrospinal fluid Dia Proteomics Data-independent acquisition mass spectrometry Csf Spectral library 
UnknownNeurofunctional phenotyping to investigate the role of the orexin system at the intersection of opioid use disorder and insomnia: a protocol for a randomised, placebo-controlled clinical trial of lemborexant in patients with insomnia receiving buprenorphine.
Not available
S-EPMC12570903 | biostudies-literature
MetabolomicsComparative LC/MS-based profiling of L-arginine producing, canavanine resistant Corynebacterium glutamicum strain ATCC 21831 and type strain ATCC 13032
Corynebacterium glutamicum strain ATCC 21831 is a producer of L-arginine that was created by random mutagenesis. It is resistant to the arginine structural analogue canavanine. In order to identify potential bottlenecks in the biosynthetic pathway that leads to this industrially important amino acid...
2015-10-06 | MTBLS128 | MetaboLights
ProteomicsA spiked human proteomic dataset from human osteogenic differentiated BMSCs and ASCs for use as a spectral library, for modelling pathways as well as protein mapping
This article describes a mass spectrometry data set generated from osteogenic differentiated bone marrow stromal cells (BMSCs) and adipose tissue derived stromal cells (ASCs) of a 24-year old healthy donor spiked with iRT peptides. Cells have been identified via FACS-Analysis positive for CD90 and C...
ORGANISM(S): Homo sapiens (Human) 
2019-10-22 | PXD015026 | Pride
Data-independent acquisition analysis Nanohplc-esi-ms/ms Osteogenic differentiated mesenchymal stem cells 
OtherMass-spectrometry-based draft of the human proteome
Data from ProteomeXchange, PXD ID: PXD000865. File: 00645_A01_P004893_B0A_A00_R1.mzml. Published as part of Nature 509, 582-587, 29 May 2014.
ORGANISM(S): Homo_sapiens_viruses, Human 
GPM32310000771 | GPMDB
Resource Reanalysis 
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