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TranscriptomicsTranscription profiling by array of Oenococcus oeni strains cultured in standard and wine stress conditions
Pangenomic oligonucleotide expression array designed for exploring the transcriptome of O. oeni strains cultured in standard and wine stress conditions.
ORGANISM(S): Oenococcus oeni 
2014-07-01 | E-MTAB-1225 | biostudies-arrayexpress
ProteomicsInternalization of therapeutic antibodies into Dendritic cells as a risk factor for immunogenicity
The appended raw files, csv files and other documents were deposited into the public domain in support for the publication "Internalization of therapeutic antibodies into Dendritic cells as a risk factor for immunogenicity" by Michel Siegel, Anna-Lena Bolender, Axel Ducret, Johannes Fraidling, Katha...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2024-08-26 | MSV000095695 | MassIVE
TranscriptomicsTranscript profiling in Actinobacillus pleuropneumoniae after adherence to, or planktonic growth over, SJPL cells.
Host-pathogen interactions are of great importance in understanding the pathogenesis of infectious microorganisms. We developed in vitro models to study porcine respiratory tract pathogens using an immortalized epithelial cell line, the St. Jude Porcine Lung (SJPL) cell line. In conditions where cy...
ORGANISM(S): Actinobacillus pleuropneumoniae 
2008-07-09 | E-GEOD-12009 | biostudies-arrayexpress
ProteomicsTime-course proteomic analysis of irradiated human endothelial cells
The vascular endothelium is a hot spot in the response to radiation therapy for both tumors and normal tissues. To improve patient outcomes, interpretable systemic hypotheses are needed to help radiobiologists and radiation oncologists propose endothelial targets that could protect normal tissues fr...
ORGANISM(S): Homo sapiens (Human) 
2022-01-19 | PXD030572 | Pride
Human Lc-msms Ionising radiation Endothelial cells 
ProteomicsThe circadian clock output deubiquitylating enzyme USP2-45 regulates intestinal Ca2+ absorption
In order to identify molecular targets of USP2-45 in the small intestine, we carried out a quantitative proteomics iTraq (Isobaric tag for relative and absolute quantitation) screen to compare proteins from WT and knockout mice. With this analysis we identified, among others, the scaffolding prote...
ORGANISM(S): Mus musculus (Mouse) 
2016-01-22 | PXD000659 | Pride
Intestinal calcium absorption Mass spectrometry Isobaric tagging Circadian clock Ubiquitin-specific protease 2 
TranscriptomicsIntegrator complex regulates NELF-mediated RNA Polymerase II pause/release and processivity at coding genes.
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Homo sapiens 
2015-05-19 | E-GEOD-60586 | biostudies-arrayexpress
MetabolomicsModification of erythrocyte membrane phospholipid composition in preterm newborns with retinopathy of prematurity: The omegaROP study

N-3 polyunsaturated fatty acids (PUFAs) may prevent retinal vascular abnormalities observed in oxygen-induced retinopathy, a model of retinopathy of prematurity (ROP). In the OmegaROP prospective cohort study, we showed that preterm infants who will develop ROP accumulate the n-6 PUFA arachidonic...

2022-09-07 | MTBLS4219 | MetaboLights
TranscriptomicsTranscription profiling by array of rat heart tissue treated with saline or doxorubicin to identify molecular mechanisms of doxorubicin cardiac toxicity
Doxorubicin induces cardiomypathy in oncology patients. This study is aimed at identifying molecular mechanisms of doxorubicin cardiac toxicity in rats. Transcription profiling of heart tissue of rats treated with saline or doxorubicin 1, 2 or 3 mg/kg/week by iv once per week for 2, 4 or 6 weeks. So...
ORGANISM(S): Rattus norvegicus 
2012-07-01 | E-MTAB-1168 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse macrophages infected with Leishmania major or Leishmania donovani
Murine bone marrow derived macrophages were infected with Leishmania major or Leishmania donovania promastigotes, allowed to phagocytose latex beads or not treated. Gene expression profiles were compared to identify i) the effect of Leishmania infection; ii) the differences in effects between L. maj...
ORGANISM(S): Mus musculus 
2008-02-05 | E-MEXP-1254 | biostudies-arrayexpress
UnknownBreast adipose tissue-derived extracellular vesicles from obese women alter tumor cell metabolism
Not available
S-SCDT-10_15252-EMBR_202357339 | biostudies-other
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