Martinez G G - OmicsDI

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Unknown (9830)
Transcriptomics (150)
Proteomics (142)
Metabolomics (25)
Genomics (23)
Genomic (2)
Other (1)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (136)
Andropogon gerardi (136)
Bacteria (136)
Bartonella quintana JK 31 (136)
Burkholderia ubonensis MSMB22 (136)
Canis lupus familiaris (136)
Homo sapiens (81)
Mus musculus (33)
Arabidopsis thaliana (8)
Rattus norvegicus (6)
Saccharomyces cerevisiae (5)
Heterocephalus glaber (4)
Sus scrofa (3)
Amphiura filiformis (2)
Bathyergus suillus (1)
Methyloversatilis universalis FAM5 (1)
Haloferax mediterranei (1)
Gorilla gorilla gorilla (1)
Scophthalmus maximus (1)
Chlamydia trachomatis (1)
Streptococcus mutans (1)
Capsicum annuum (1)
Aspergillus niger (1)
Salmonella enterica (1)
Solea senegalensis (1)
Dictyostelium discoideum (1)
Zea mays (1)
Hordeum vulgare (1)
Vibrio cholerae (1)
Gallus gallus (1)

Repository

biostudies-arrayexpress (163)
pride (136)
MetaboLights (23)
EGA (8)
MassIVE (6)
dbGaP (2)
GNPS (2)
ENA (2)
GPMDB (1)

Tissue

Cell culture (30)
Brain (10)
Cell line cell (7)
Blood (6)
Epithelial cell (6)
Blood plasma (5)
T cell (5)
Fibroblast (4)
Liver (4)
Lung (4)
Stem cell (4)
Feces (3)
HEK-293 cell (3)
Kidney (3)
Placenta (3)
Primary cell (3)
Spleen (3)
T-47D cell (3)
UWB1.289 cell (3)
Bone marrow (2)
Cell suspension culture (2)
Early embryonic cell (2)
HeLa cell (2)
Heart (2)
HepG2 cell (2)
Hepatocyte (2)
K-562 cell (2)
Leaf (2)
Lymph node (2)
MDA-MB-231 cell (2)

Disease

Parkinson's disease (4)
Normal (3)
COVID-19 (3)
Neuroblastoma (3)
Acute leukemia (2)
Unspecified peripheral T-cell lymphoma (1)
Not Available (1)
Abdominal pain (1)
Acute myeloid leukemia (1)
Alpers-Huttenlocher syndrome (1)
Amyotrophic lateral sclerosis (1)
Atherosclerosis (1)
Breast cancer (1)
Cervix carcinoma (1)
Cholangiocarcinoma (1)
Chronic kidney disease (1)
Chronic myeloid leukemia (1)
Colon cancer (1)
Disease free (1)
Fascioliasis (1)
Fragile X syndrome (1)
Glioblastoma (1)
Huntington Disease (1)
Infertility (1)
Influenza (1)
Mitochondrial metabolism disease (1)
Myocardial ischemia (1)
Non-small cell lung carcinoma (1)
Obesity (1)
Osteosarcoma (1)

Technology Type

Mass Spectrometry (136)
Shotgun proteomics (83)
Bottom-up proteomics (20)
Affinity purification coupled with mass spectrometry proteomics (17)
Mass spectrometry (16)
SWATH MS (11)
Gel-based experiment (9)
Data-dependent acquisition (8)
Data-independent acquisition (8)
NMR spectroscopy (6)
Top-down proteomics (6)
Mass spectrometry assay (3)
All-ion fragmentation (3)
SRM/MRM (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina Genome Analyzer IIx, Illumina HiSeq 2500, Illumina HiSeq 2000 (1)
NMR spectroscopy assay (1)
DiaPASEF (1)
MSE (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (7)
Illumina NovaSeq 6000 (6)
Nuclear Magnetic Resonance (NMR) - (5)
NextSeq 500 (4)
Illumina HiSeq 2000 (3)
Q Exactive (3)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (3)
Liquid Chromatography MS - alternating - hilic (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
PacBio RS II (2)
Illumina NovaSeq X (2)
Illumina MiSeq (2)
Illumina HiSeq 2500 (2)
Illumina HiSeq 4000 (2)
Xevo G2 Q-Tof (2)
Gas Chromatography MS - (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
PromethION (1)
NextSeq500 (1)
MoFlo XPD (Beckman Coulter, Fullerton, CA, USA) flow cytometer (1)
Agilent DNA Microarray Scanner G2565CA (1)
Illumina MouseWG-6 v2 Expression BeadChip (1)
G2565BA DNA microarray scanner [Agilent] (1)
Ion Torrent Proton (1)
Instrument (1)
LTQ Orbitrap Velos Pro (1)
Orbitrap Fusion Lumos (1)
Q Exactive Plus (1)
TripleTOF 6600 (1)

Publication Date

2025 (32)
2010 (32)
2022 (29)
2026 (26)
2011 (24)
2023 (23)
2012 (19)
2024 (18)
2019 (17)
2013 (16)
2015 (15)
2018 (14)
2021 (13)
2020 (13)
2014 (10)
2016 (8)
2009 (7)
2017 (5)
2008 (4)
2007 (2)
2005 (2)

CHEBI ID

CHEBI:30769 (12)
CHEBI:32816 (10)
CHEBI:26271 (8)
CHEBI:15428 (8)
CHEBI:6650 (8)
CHEBI:27266 (8)
CHEBI:18012 (8)
CHEBI:28300 (7)
CHEBI:28044 (7)
CHEBI:15366 (7)
CHEBI:27897 (7)
CHEBI:17992 (6)
CHEBI:33508 (6)
CHEBI:25094 (6)
CHEBI:18186 (6)
CHEBI:17234 (6)
CHEBI:29864 (6)
CHEBI:24898 (6)
CHEBI:25017 (6)
CHEBI:17754 (6)
CHEBI:15741 (6)
CHEBI:15971 (6)
CHEBI:16857 (6)
CHEBI:16199 (6)
CHEBI:15603 (6)
CHEBI:17895 (6)
CHEBI:17295 (6)
CHEBI:24266 (5)
CHEBI:26984 (5)
CHEBI:17822 (5)

Metabolite Name

Pyruvic acid (7)
Citric acid (7)
Glycine (6)
Mannitol (6)
Urea (6)
L-Phenylalanine (6)
D-Glucose (5)
Valine (5)
Betaine (5)
L-Histidine (5)
Phenylalanine (5)
L-Glutamine (5)
Glucose (5)
Creatine (5)
L-Valine (5)
L-Leucine (5)
L-Tyrosine (5)
L-Lactic acid (4)
D-Galactose (4)
Leucine (4)
Glycerol (4)
L-Alanine (4)
Succinic acid (4)
L-Threonine (4)
Pantothenic acid (4)
Choline (4)
Fumaric acid (4)
Glyceric acid (4)
Lysine (4)
Malic acid (4)

First Public Date

2020 (1)
2014 (1)

Study type

Transcription profiling by array (94)
RNA-seq of coding RNA (23)
Comparative genomic hybridization by array (10)
ChIP-seq (9)
Unknown experiment type (6)
DNA-seq (3)
RNA-seq of coding RNA from single cells (3)
CLIP-seq (2)
Methylation profiling by array (2)
RNA-seq of non coding RNA (2)
RIP-chip by array (1)
Human - Methylation microarray (1)
ChIP-chip by tiling array (1)
Cell line - High-throughput sequencing (1)
ChIP-chip by array (1)
Genotyping by array (1)
Transcription profiling by RT-PCR (1)
ATAC-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (1235)
2025 (1183)
2023 (1172)
2021 (1162)
2024 (1072)
2020 (818)
2019 (561)
2018 (451)
2017 (381)
2016 (338)
2015 (326)
2014 (258)
2013 (186)
2026 (180)
2012 (179)
2011 (153)
2010 (111)
2009 (60)
2008 (58)
2007 (28)
2006 (23)
2005 (13)
2004 (13)
2003 (10)
2002 (8)
2000 (6)
1998 (4)
1999 (2)
2001 (1)

Lab affiliation

Cellzome (7)
Microbial Evolution Laboratory, Centro de Astrobiologia (CSIC-INTA), 28850 Torrejón de Ardoz, Madrid, Spain (7)
Quantitative Proteomics Proteome Center Tübingen Universität Tübingen Auf der Morgenstelle 15 72076 Tübingen (3)
Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, Barcelona 08003, Spain (2)
Institute of Pharmacology and Structural Biology, CNRS, Toulouse (2)
Max Perutz Labs, Medical University of Vienna, Dr. Bohr-Gasse 9/2, 1030 Vienna, Austria (2)
Professor, Department of Cellular and Molecular Pharmacology (2)
Systems Biology Ireland, University College Dublin (2)
Vice Director, Professor Novo Nordisk Foundation Center for Protein Research Proteomics Program University of Copenhagen Faculty of Health and Medical Sciences Blegdamsvej 3b DK-2200 Copenhagen Denmark (2)
1 Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands 2 Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
1. Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands 2. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
1. Gene Regulation, Stem Cells and Development group, PTS, Granada GENyO, Pfizer-University of Granada-Andalusian Regional Government Centre for Genomics and Oncological Research, Avenida de la Ilustración 114, 18016 Granada, Spain. 2. Department of Biochemistry and Molecular Biology I, Faculty of Science, University of Granada, Avenida Fuentenueva s/n, 18071 Granada, Spain. 3. Instituto de Investigación Biosanitaria ibs.GRANADA, Granada, Spain. (1)
1INSERM, U1068, Cancer Research Center of Marseille, Institut Paoli-Calmettes, CNRS, UMR7258, and University Aix-Marseille, Marseille, France (1)
Australian Proteome Analysis Facility, Macquarie University, NSW 2109, Australia (1)
Biochemistry and Molecular Biophysics Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA Children's Hospital of Philadelphia Research Institute, Philadelphia, PA 19104, USA. (1)
Biochemistry and Molecular Biophysics Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA. Children's Hospital of Philadelphia Research Institute, Philadelphia, PA 19104, USA. (1)
Biochemistry and Molecular Biophysics Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA. Department of Pediatrics, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands Singapore Immunology Network (SIgN), Agency for Science, Technology and Research (A*STAR), Singapore, Singapore. Department of Pharmacy, National University of Singapore, Singapore 117543, Singapore. (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands; Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands; and Singapore Immunology Network (SIgN), Agency for Science, Technology and Research (A*STAR), Singapore, Singapore. (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands. (1)
CNIO (1)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (1)
Cambridge Institute for Medical Research (1)
Cell Signaling and Immunology School of Life Sciences University of Dundee (1)
Center for Neuroscience and Cell Biology (1)
Centre for Discovery Brain Sciences, University of Edinburgh, UK; Simons Initiative for the Developing Brain, University of Edinburgh, UK (1)
Centro Nacional de Investigaciones Cardiovasculares (CNIC) and CIBER de Enfermedades Cardiovasculares (CIBERCV), Madrid, Spain (1)
Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid (Spain) (1)
Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC) (1)

10173 Results

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