Martinez P P - OmicsDI

Show results for

Unknown (14071)
Transcriptomics (347)
Proteomics (231)
Genomics (39)
Metabolomics (25)
Models (7)
Genomic (5)
Other (1)

Organisms

Homo sapiens (204)
Mus musculus (75)
Arabidopsis thaliana (15)
Saccharomyces cerevisiae (13)
Rattus norvegicus (8)
Sus scrofa (6)
Heterocephalus glaber (4)
Medicago truncatula (3)
Drosophila melanogaster (3)
Citrus limonia (2)
Solanum lycopersicum (2)
Escherichia coli (2)
Danio rerio (2)
Rhinolophus ferrumequinum (1)
Methyloversatilis universalis FAM5 (1)
Citrus jambhiri (1)
Haloferax mediterranei (1)
Citrus medica (1)
Gorilla gorilla gorilla (1)
Scophthalmus maximus (1)
Mycobacterium leprae (1)
Lactococcus lactis subsp. lactis (1)
Lactococcus lactis (1)
Chlamydia trachomatis (1)
Streptococcus mutans (1)
Trichoderma reesei (1)
Capsicum annuum (1)
Aspergillus niger (1)
Platynereis dumerilii (1)
Vitis riparia x Vitis berlandieri (1)

Organisms

Citrus limonia (2)
Rhizobium sp. CCGE 510 (1)
Rhizobium sp. Pop5 (1)
Cuscuta campestris (1)
Pseudomonas putida KT2440 (1)

Repository

biostudies-arrayexpress (364)
pride (224)
MetaboLights (25)
EGA (12)
ENA (10)
BioModels (7)
dbGaP (5)
MassIVE (5)
geo (1)
GPMDB (1)
PanoramaPublic (1)
PAXDB (1)

Tissue

Cell culture (32)
Epithelial cell (19)
Brain (13)
Liver (11)
Fibroblast (8)
Blood (8)
Cell line cell (7)
Lung (7)
Plant cell (6)
Blood plasma (6)
Heart (5)
HEK-293 cell (4)
Kidney (4)
T cell (4)
T-47D cell (3)
UWB1.289 cell (3)
Cholangiocyte (3)
Pluripotent stem cell (3)
Placenta (3)
Lymph node (3)
Macrophage (3)
Cell suspension culture (3)
Stem cell (3)
HeLa cell (3)
Leaf (3)
Primary cell (3)
Blood cell (3)
K-562 cell (2)
HepG2 cell (2)
Colon epithelial cell (2)

Disease

Colon cancer (12)
Parkinson's disease (6)
COVID-19 (6)
Normal (3)
Polycystic liver disease (3)
Malaria (3)
Acute leukemia (3)
Infertility (2)
Plasmodium falciparum malaria (2)
Brain glioblastoma multiforme (2)
Cholangiocarcinoma (2)
Cervix carcinoma (2)
Pancreatic cancer (2)
Breast cancer (2)
Disease free (2)
Alzheimer's disease (1)
Unspecified peripheral T-cell lymphoma (1)
Spindle cell tumor (1)
Pre-tumoral lesion in a mouse model of human adamantinomatous craniopharyngioma (ACP) (1)
Not Available (1)
Fascioliasis (1)
Sarcoidosis (1)
Idiopathic pulmonary fibrosis (1)
Neurodevelopmental abnormality (1)
FTDALS1 (1)
Permanent neonatal diabetes mellitus (1)
Neurological dysfunction (1)
Type 1 diabetes mellitus (1)
Fragile X syndrome (1)
Non-small cell lung carcinoma (1)

Technology Type

Mass Spectrometry (224)
Shotgun proteomics (117)
Bottom-up proteomics (42)
Affinity purification coupled with mass spectrometry proteomics (32)
Data-dependent acquisition (20)
Mass spectrometry (17)
SWATH MS (15)
Gel-based experiment (14)
Data-independent acquisition (12)
Top-down proteomics (8)
NMR spectroscopy (6)
Mass spectrometry assay (4)
All-ion fragmentation (3)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
DiaPASEF (2)
SRM/MRM (2)
Applied Biosystems 3100 automated sequencer-GeneMarker v.1.6 (Softgenetics) (1)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina Genome Analyzer IIx, Illumina HiSeq 2500, Illumina HiSeq 2000 (1)
NMR spectroscopy assay (1)
HDMSE (1)

Instrument Platform

Illumina NovaSeq 6000 (16)
Liquid Chromatography MS - negative - reverse phase (8)
Illumina HiSeq 2500 (6)
Illumina HiSeq 2000 (5)
Illumina HiSeq 4000 (5)
Nuclear Magnetic Resonance (NMR) - (5)
Illumina MiSeq (3)
Q Exactive (3)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (3)
Liquid Chromatography MS - alternating - hilic (3)
Illumina NovaSeq X (2)
NextSeq 2000 (2)
NextSeq 500 (2)
Chromium Next GEM Single Cell 3ʹ Reagent Kits v3.1 (1)
Thermo Fisher (1)
Python 3.10.12 environment (1)
PromethION (1)
C1 Single-Cell Auto Prep System, Fluidigm (1)
MoFlo XPD (Beckman Coulter, Fullerton, CA, USA) flow cytometer (1)
Agilent DNA Microarray Scanner G2565CA (1)
Illumina MouseWG-6 v2 Expression BeadChip (1)
G2565BA DNA microarray scanner [Agilent] (1)
GenePix 4000B [Axon Instruments] (1)
None (1)
Ion Torrent Proton (1)
Instrument (1)
Synapt G2 HDMS (1)
LTQ Orbitrap Velos (1)
Orbitrap Fusion (1)
Q Exactive Plus (1)

Publication Date

2012 (63)
2025 (54)
2014 (47)
2010 (46)
2026 (44)
2013 (42)
2011 (39)
2015 (37)
2022 (36)
2019 (33)
2024 (29)
2023 (29)
2021 (27)
2016 (26)
2020 (21)
2018 (16)
2009 (10)
2017 (9)
2008 (6)
2007 (4)
2005 (2)
2006 (1)
2004 (1)

UNIPROT ID/AC

Q7KYZ4 (1)
A0A1S4C5Z3_TOBAC (1)
A1XEL4_TOBAC (1)
SAHH_TOBAC (1)
A0A1S4BAB4_TOBAC (1)
A0A1S4CJ42_TOBAC (1)
A0A1S4ALI5_TOBAC (1)
A0A1S3YAA4_TOBAC (1)
A0A1S4AAJ0_TOBAC (1)
A0A1S4AZF8_TOBAC (1)
A0A1S3XZ12_TOBAC (1)
A0A1S4ASU6_TOBAC (1)
A0A1S4AT66_TOBAC (1)
A0A1S4C8X1_TOBAC (1)
A0A1S4B1W8_TOBAC (1)
A0A1S4AQ88_TOBAC (1)
A0A1S3YC29_TOBAC (1)
A0A1S4AGI8_TOBAC (1)
A0A1S4D1D4_TOBAC (1)
A0A1S4AGZ2_TOBAC (1)
A0A1S4A638_TOBAC (1)
A0A1S3XUV5_TOBAC (1)
A0A1S4BBR9_TOBAC (1)
A0A1S3X2Z3_TOBAC (1)
A0A1S3ZJN1_TOBAC (1)
A0A1S3ZUM6_TOBAC (1)
A0A1S4CKU1_TOBAC (1)
A0A1S3ZIA8_TOBAC (1)
A0A1S4CEY5_TOBAC (1)
A0A1S4CDI0_TOBAC (1)

CHEBI ID

CHEBI:30769 (13)
CHEBI:32816 (11)
CHEBI:26271 (9)
CHEBI:15428 (9)
CHEBI:6650 (9)
CHEBI:27266 (9)
CHEBI:18012 (9)
CHEBI:28300 (8)
CHEBI:28044 (8)
CHEBI:27897 (8)
CHEBI:33508 (7)
CHEBI:25094 (7)
CHEBI:18186 (7)
CHEBI:17234 (7)
CHEBI:24898 (7)
CHEBI:25017 (7)
CHEBI:17754 (7)
CHEBI:15366 (7)
CHEBI:16199 (7)
CHEBI:24266 (6)
CHEBI:17992 (6)
CHEBI:26984 (6)
CHEBI:17822 (6)
CHEBI:15978 (6)
CHEBI:18237 (6)
CHEBI:22660 (6)
CHEBI:22653 (6)
CHEBI:16811 (6)
CHEBI:29864 (6)
CHEBI:35195 (1)

Metabolite Name

Pyruvic acid (7)
Citric acid (7)
Glycine (6)
Mannitol (6)
Urea (6)
L-Phenylalanine (6)
D-Glucose (5)
Valine (5)
Betaine (5)
L-Histidine (5)
Phenylalanine (5)
L-Glutamine (5)
Glucose (5)
Creatine (5)
L-Valine (5)
L-Leucine (5)
L-Tyrosine (5)
L-Lactic acid (4)
D-Galactose (4)
Leucine (4)
Glycerol (4)
L-Alanine (4)
Beta-alanine (4)
Succinic acid (4)
L-Threonine (4)
Pantothenic acid (4)
Choline (4)
Fumaric acid (4)
Glyceric acid (4)
Lysine (4)

First Public Date

2013 (3)
2014 (2)
2026 (1)
2023 (1)
2022 (1)
2020 (1)
2018 (1)

Modelling Approach

Ordinary differential equation model (7)

Lab affiliation

Cellzome (7)
Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (7)
Microbial Evolution Laboratory, Centro de Astrobiologia (CSIC-INTA), 28850 Torrejón de Ardoz, Madrid, Spain (5)
Systems Biology Ireland, University College Dublin (3)
Professor, Department of Cellular and Molecular Pharmacology (2)
Department of Microbiology and Molecular Medicine, Faculty of Medicine, University of Geneva, Geneva, CH-1211 Switzerland (2)
Departament de Bioquímica i Biologia Molecular Universitat de Valencia (2)
Senior Director, Dynamic Omics, CGR, One Medimmune Way Gaithersburg, MD 20878 (2)
Proteomics Platform CIC bioGUNE Bizkaia Tech. Park Build. 800 Derio 48160 Spain (2)
Translational Genomics Research Institute (2)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (2)
Institute of Pharmacology and Structural Biology, CNRS, Toulouse (2)
Chromatin Biology Laboratory, Cancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), L’Hospitalet de Llobregat, Barcelona, Spain. Chromatin Biology Laboratory, Josep Carreras Leukaemia Research Institute (IJC), Badalona, Spain. (2)
Fernando Garcia Martinez Ph.D. Proteomics & MS Specialist Proteomics Unit, Spanish National Cancer Research Centre (CNIO) Melchor Fernández Almagro 3. E28029 MADRID, SPAIN. Phone +34 912246900 ext 3112 (2)
Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany (1)
University of Toronto | U of T · Tanz Centre for Research in Neurodegenerative Diseases (1)
Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA (1)
Proteomics Service CIC bioGUNE, Derio, Spain (1)
Department of Biochemistry and Molecular Biology and Agricultural Chemistry and Soil science University of Alicante SPAIN (1)
Proteome Sciences Plc, United Kingdom (1)
University of Cologne, Faculty of Mathematics and Natural Sciences, Institute for Genetics, CECAD Research Center, Cologne, De (1)
Breast Cancer Clinical Research Unit Centro Nacional de Investigaciones Oncológicas – CNIO Madrid, Spain. (1)
Hans Merensky Chair in Avocado Research, Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria 0028, South Africa (1)
Head of Mass Spectrometry Proteomics The Francis Crick Institute 1 Midland Road London NW1 1AT (1)
IWE ZIK HALOmem, Martin Luther University Halle-Wittenberg, Halle, Germany (1)
Biochemistry and Molecular Biophysics Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA Children's Hospital of Philadelphia Research Institute, Philadelphia, PA 19104, USA. (1)
Center for Molecular Medicine, University Medical Center Utrecht, Utrecht University, 3C584 CG Utrecht, The Netherlands (1)
Biochemistry and Molecular Biophysics Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA. Department of Pediatrics, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA (1)
Biochemistry and Molecular Biophysics Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA. Children's Hospital of Philadelphia Research Institute, Philadelphia, PA 19104, USA. (1)
Quantitative Biology Unit, Luxembourg Institute of Health,Luxembourg (1)

IsPrivate

False (7)

Modification

4-tetrahydrothiazine-3-carboxylic acid (2)
4 (1)

Study type

Transcription profiling by array (237)
RNA-seq of coding RNA (39)
Comparative genomic hybridization by array (21)
ChIP-seq (15)
Unknown experiment type (12)
RNA-seq of coding RNA from single cells (11)
Methylation profiling by array (6)
ChIP-chip by tiling array (3)
Genotyping by array (3)
High-throughput sequencing (2)
RNA-seq of non coding RNA (2)
Baseline (1)
RIP-chip by array (1)
Human - Methylation microarray (1)
Cell line - One-color microarray (1)
Cell line - High-throughput sequencing (1)
ChIP-chip by array (1)
Transcription profiling by RT-PCR (1)
MicroRNA profiling by high throughput sequencing (1)
ATAC-seq (1)
Other (1)
Single nucleus RNA sequencing (1)
DNA-seq (1)

Release Date

2022 (1809)
2021 (1712)
2025 (1680)
2023 (1676)
2024 (1461)
2020 (1196)
2019 (800)
2018 (654)
2017 (545)
2016 (494)
2015 (475)
2014 (426)
2026 (287)
2012 (286)
2013 (271)
2011 (211)
2010 (155)
2009 (95)
2008 (67)
2007 (33)
2006 (29)
2005 (20)
2004 (16)
2003 (16)
1999 (7)
1998 (7)
2000 (4)
2002 (3)

Previous page
1 / 1473
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 1473
Next page

Sort by:

Relevance

Page size

Martinez-Guimera2017 - Generic negative feedback circuit (Model 4)

Martinez-Guimera2017 - Generic negative feedback circuit (Model 4) This model is described in the article: 'Molecular habituation' as a potential mechanism of gradual homeostatic loss with age. Martinez Guimera A, Welsh CM, Proctor CJ, McArdle A, Shanley DP. Mech. Ageing Dev. ...

MODEL1710260003 | BioModels

Martinez-Guimera2017 - Generic negative feedforward circuit (Model 5)

Martinez-Guimera2017 - Generic negative feedforward circuit (Model 5) This model is described in the article: 'Molecular habituation' as a potential mechanism of gradual homeostatic loss with age. Martinez Guimera A, Welsh CM, Proctor CJ, McArdle A, Shanley DP. Mech. Ageing De...

MODEL1710260004 | BioModels

Martinez-Guimera2017 - Generic redox signalling model without negative regulation (Model 1)

Martinez-Guimera2017 - Generic redox signalling model without negative regulation (Model 1) This model is described in the article: 'Molecular habituation' as a potential mechanism of gradual homeostatic loss with age. Martinez Guimera A, Welsh CM, Proctor CJ, McArdle A, Shanley...

MODEL1710260000 | BioModels

Martinez-Guimera2017 - Generic redox signalling model with negative feedback regulation (Model 2)

Martinez-Guimera2017 - Generic redox signalling model with negative feedback regulation (Model 2) This model is described in the article: 'Molecular habituation' as a potential mechanism of gradual homeostatic loss with age. Martinez Guimera A, Welsh CM, Proctor CJ, McArdle A, S...

MODEL1710260001 | BioModels

Martinez-Guimera2017 - Generic redox signalling model with negative feedforward regulation (Model 3)

Martinez-Guimera2017 - Generic redox signalling model with negative feedforward regulation (Model 3) This model is described in the article: 'Molecular habituation' as a potential mechanism of gradual homeostatic loss with age. Martinez Guimera A, Welsh CM, Proctor CJ, McArdle A...

MODEL1710260002 | BioModels

Data for modeling the height and diameter of Pinus merkusii and P. michoacana in Zambia.

Not available

S-EPMC8511804 | biostudies-literature

Sliding of HIV-1 reverse transcriptase over DNA creates a transient P pocket - targeting P-pocket by fragment screening.

Not available

S-EPMC8654897 | biostudies-literature

Martinez-Guimera2017 - Generic redox signalling model with negative feedback regulation (Model 2)

2020-03-20 | MODEL2001080001 | BioModels

Tissue remodelling and increased DNA damage in patients with incompetent valves in chronic venous insufficiency.

Not available

S-EPMC8358866 | biostudies-literature