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Transcriptomics (89)
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Bombyx mori (57)
Klebsiella pneumoniae (57)
Schizosaccharomyces pombe (57)
Human immunodeficiency virus 1 (57)
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Sinorhizobium meliloti BL225C (57)
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cellular organisms (4)
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Organisms

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biostudies-arrayexpress (97)
pride (57)
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Disease

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Technology Type

Mass Spectrometry (57)
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Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

NextSeq 500 (8)
Illumina HiSeq 4000 (5)
Illumina NovaSeq 6000 (4)
Liquid Chromatography MS - positive - reverse phase (4)
Ion Torrent PGM (3)
Illumina HiSeq 2500 (3)
LTQ Orbitrap (3)
Flat panel airlift-loop reactor with a 1.7 L working volume (2)
Maxwell® 16 LEV simplyRNA Tissue kit (Promega) (2)
NextSeq 2000 (2)
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Q Exactive (2)
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BGISEQ-500 (1)
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Ion Torrent S5 XL (1)
Illumina HiSeq 2000 (1)
7890A GC coupled to a 5975C inert XL MSD, with a 7683 series injector (G2614A) (1)
MS:1000031 (1)
6545 Q-TOF LC/MS (1)
MaXis (1)

Publication Date

2024 (16)
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2020 (9)
2012 (9)
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2016 (7)
2010 (7)
2017 (5)
2005 (4)
2015 (4)
2011 (4)
2008 (2)
2007 (1)
2004 (1)

CHEBI ID

CHEBI:17234 (5)
CHEBI:15428 (4)
CHEBI:16027 (4)
CHEBI:30751 (2)
CHEBI:15366 (2)
CHEBI:15978 (2)
CHEBI:17754 (2)
CHEBI:16908 (2)
CHEBI:15846 (2)
CHEBI:15343 (2)
CHEBI:17835 (2)
CHEBI:17794 (2)
CHEBI:29052 (2)
CHEBI:16108 (2)
CHEBI:16526 (2)
CHEBI:18367 (2)
CHEBI:16761 (2)
CHEBI:15422 (2)
CHEBI:33563 (1)
CHEBI:58774 (1)
CHEBI:37393 (1)
CHEBI:17666 (1)
CHEBI:16298 (1)
CHEBI:16024 (1)
CHEBI:28757 (1)
CHEBI:14575 (1)
CHEBI:23008 (1)
CHEBI:35366 (1)
CHEBI:16110 (1)
CHEBI:29183 (1)

Metabolite Name

Malonate (2)
Maltose (2)
Succinate (2)
Lactate (2)
Glucose (2)
Valine (2)
Leucine (2)
Alanine (2)
Threonine (2)
N,N,N-Trimethyl-L-alanyl-L-proline betaine (TMAP) (1)
Phosphatidylcholine(40:1) (1)
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Phosphatidylserine(40:9) (1)
Phosphatidylcholine(40:2) (1)
DMPE(40:10) (1)
Triacylglycerol(49:5) (1)
Glucosylceramide(42:2) (1)
Phosphatidylinositol(32:2) (1)
Phosphatidylglycerol(38:4) (1)
Phophatidylethanolamine(42:11) (1)
Phosphatidylserine(38:7) (1)
Phosphatidylcholine(38:1) (1)
Phosphatidylserine(36:4) (1)
Phosphatidylserine(36:5) (1)
Phophatidylethanolamine(40:10) (1)
Phosphatidylserine(34:3) (1)
Dimethylphosphatidylethanolamine 34:2 (1)
DAG(35:0) (1)
Otophylloside B (1)
13-(Z)-Docosenamide (1)

IsPrivate

False (6)

Model Flag

Non Kinetic (3)
Non Miriam (1)

First Public Date

2024 (2)
2017 (2)
2016 (1)

Modelling Approach

Ordinary differential equation model (3)

Study type

Transcription profiling by array (46)
RNA-seq of coding RNA (20)
Genotyping by array (5)
ChIP-seq (4)
DNA-seq (4)
RNA-seq of coding RNA from single cells (3)
RNA-seq of total RNA (2)
Animal - One-color microarray (1)
ChIP-chip by tiling array (1)
Animal - Single-cell sequencing (1)
High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
MicroRNA profiling by high throughput sequencing (1)
Comparative genomic hybridization by array (1)
ScATAC-seq (1)
MicroRNA profiling by array (1)
Methylation profiling by array (1)
Genotyping by high throughput sequencing (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (352)
2025 (291)
2021 (288)
2023 (277)
2024 (243)
2020 (208)
2019 (139)
2018 (128)
2017 (99)
2016 (67)
2026 (59)
2014 (57)
2015 (53)
2013 (36)
2012 (32)
2011 (23)
2010 (23)
2008 (11)
2007 (7)
2009 (7)
2005 (4)
2002 (3)
2004 (2)
2006 (2)
2003 (2)
1998 (1)

Lab affiliation

Federal University of Uberlandia (3)
Dept. of Biochemistry, Laboratory of Neuroproteomic, Biology Institute, Brazil (2)
Wageningen University (2)
Group Leader Cell&Developmental Biology John Innes Centre Norwich, UK (2)
MRC Toxicology Unit, University of Cambridge, Tennis Court Road, Cambridge CB2 1QR, UK. (1)
Glycoproteomics Laboratory, Department of Parasitology, Institute of Biomedical Sciences, Universidade of Sao Paulo (1)
Sulfaging group, Leibniz-Institut fur Analytische Wissenschaften - ISAS - e.V. Dortmund, Germany (1)
Biochemistry and Metabolism Department John Innes Centre Norwich UK (1)
Biochemistry and Metabolism Department John Innes Centre Norwich Research Park Norwich, UK (1)
Leibniz Institute for Analytical Sciences - ISAS - eV (1)
Leibniz-Institut für Analytische Wissenschaften - ISAS - e.V (1)
Department of Prosthodontics and Periodontics, Division of Periodontics, Piracicaba Dental School, University of Campinas, Brazil (1)
Glycoproteomics Lab, Parasitology department, Institute of Biomedical Sciences of University of São Paulo, Brazil. (1)
Laboratory of Neuroproteomics, DBBT, IB, Universidade Estadual de Campinas, Brazil (1)
Dept. Oncology-Pathology, Scilifelab, Karolinska Institutet, Stockholm, Sweden (1)
Lab of Neuroproteomics, Department of Biochemistry and Tissue Biology, Institute of Biology, University of Campinas (UNICAMP), Campinas, SP, Brazil. (1)
UCLA, Charles E. Young Drive CHS 26-100 Los Angeles, CA 90095 (1)
Departamento de Parasitologia Instituto de Ciências Biomédicas, Universidade de São Paulo Av. Prof. Lineu Prestes, 1374, sala 39, Sao Paulo, Brazil (1)
Laboratório de Biologia Molecular e Sistêmica de Tripanossomatídeos, Instituto Carlos Chagas, Fundação Oswaldo Cruz, Curitiba, Parana, Brazil (1)
Division of Applied Functional Genomics, German Cancer Research Center (DKFZ), National Center for Tumor Diseases (NCT) Heidelberg, Heidelberg, Germany. (1)
University of Campinas - São Paulo - Brazil (1)
Integrated Space Stem Cell Orbital Research, University of California San Diego, USA (1)
CIIMAR - Interdisciplinary Centre of Marine and Environmental Research, Porto University (1)
VetMedZg Laboratory,Faculty of Veterinary Medicine, University of Zagreb, Zagreb, Croatia Institute of Biodiversity, Animal Health & Comparative Medicine, College of Medicine, Veterinary Medicine and Life Sciences, University of Glasgow, Glasgow, UK (1)
Laboratory of Pharmacology and Experimental Therapeutics, Institute for Biomedical Imaging and Life Sciences (IBILI), Faculty of Medicine and CNC.IBILI Research Consortium, University of Coimbra, Coimbra, Portugal (1)
Associate professor at University of Campinas-SP (UNICAMP-SP) (1)
Univ Coimbra, Coimbra Institute for Clinical and Biomedical Research (iCBR), Faculty of Medicine, Coimbra, Portugal. (1)
Marseille Proteomics, Inserm UMR1068, CNRS UMR7258, AMU U105, Institut Paoli Calmettes (1)
Farnusch Kaschani, Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (1)
Univ.Lille, CHU Lille, Inserm U1192, Protéomique Réponse Inflammatoire Spectrométrie de Masse (PRISM), Lille, France (1)

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LRRK2 BAC transgenic rats develop progressive, L-DOPA-responsive motor impairment, and deficits in dopamine circuit function.

Not available

S-EPMC4754049 | biostudies-literature

Comparison of KrasG12D/WT;p53Fx/Fx and KrasG12D/G12D;p53Fx/Fx MEFs

Microarray expression data generated to compare the biological impact of KrasG12D allelic duplication in p53null mouse embryonic fibroblasts (MEFs). The RAS/MAPK-signalling pathway is frequently deregulated in non-small cell lung cancer (NSCLC), often through activating mutations in KRAS. Mouse mode...

ORGANISM(S): Mus musculus

2016-02-24 | E-GEOD-75871 | biostudies-arrayexpress

P2Y2 Receptor Induces L. amazonensis Infection Control in a Mechanism Dependent on Caspase-1 Activation and IL-1β Secretion

Not available

S-EPMC7547346 | biostudies-literature

Erythrina L. (Phaseoleae, Papilionoideae, Leguminosae) of Brazil: an updated nomenclatural treatment with notes on etymology and vernacular names.

Not available

S-EPMC10495828 | biostudies-literature

Identification of a Novel L-rhamnose Uptake Transporter in the Filamentous Fungus Aspergillus niger.

Not available

S-EPMC5161314 | biostudies-literature

Expression data for Saccharomyces cerevisiae oxidative stress response

Oxidative stress is a harmful condition in a cell, tissue, or organ, caused by an imbalnace between reactive oxygen species and other oxidants and the capacity of antioxidant defense systems to remove them. The budding yeast S. cerevisiae has been the major eukaryotic model for studies of response t...

ORGANISM(S): Saccharomyces cerevisiae

2013-12-17 | E-GEOD-26169 | biostudies-arrayexpress

L-Methionine inhibits growth of human pancreatic cancer cells.

Not available

S-EPMC4346324 | biostudies-literature

Effect of a KRAS peptide nucleic acid clamp on the Ion Torrent sequencing protocol

To test whether the addition of a peptide nucleic acid (PNA) clamp, which binds WT KRAS at codon 12, can increase the efficacy of mutation detection for KRASG12D within a targeted NGS setting. We tested the effect of clamping the wild-type KRAS sequence in a reference standard (Tru-Q 7, 1.3% Tier fr...

ORGANISM(S): Homo sapiens

2017-07-29 | E-MTAB-5718 | biostudies-arrayexpress

l-Isoaspartyl Methyltransferase Deficiency in Zebrafish Leads to Impaired Calcium Signaling in the Brain.

Not available

S-EPMC7859441 | biostudies-literature

Chemical and Biological Properties of Hymenaea courbaril L.: A Review.

Not available

S-EPMC12860520 | biostudies-literature

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