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Unknown
(2690)
Transcriptomics
(70)
Proteomics
(49)
Genomics
(29)
Metabolomics
(15)
Multiomics
(3)
Genomic
(1)
Other
(1)
Organisms
Homo sapiens
(78)
Mus musculus
(22)
Solanum lycopersicum
(4)
Fundulus heteroclitus
(3)
Drosophila melanogaster
(3)
Saccharomyces cerevisiae
(3)
Ovis aries
(3)
Methanobrevibacter smithii ATCC 35061
(2)
Gallus gallus
(2)
Bos taurus
(2)
Jatropha curcas
(1)
Methanobrevibacter smithii
(1)
Branchiostoma belcheri
(1)
Persea americana
(1)
Papio anubis
(1)
Tetraodon nigroviridis
(1)
Schizosaccharomyces pombe
(1)
Vitis vinifera
(1)
Glycine max
(1)
Rattus norvegicus
(1)
Arabidopsis thaliana
(1)
Severe acute respiratory syndrome coronavirus 2
(1)
Alces alces
(1)
Antidorcas marsupialis
(1)
Beta vulgaris
(1)
Campylobacter hepaticus
(1)
Cervus elaphus
(1)
Equus caballus
(1)
Lepeophtheirus salmonis
(1)
Microcystis aeruginosa PCC 7806
(1)
Organisms
Mus musculus
(2)
Repository
biostudies-arrayexpress
(70)
pride
(41)
EGA
(25)
MetaboLights
(14)
MassIVE
(7)
geo
(2)
PanoramaPublic
(2)
ENA
(2)
dbGaP
(1)
GNPS
(1)
Tissue
Cell culture
(11)
Blood serum
(4)
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(3)
Kidney
(3)
T cell
(3)
Blood cell
(2)
Permanent cell line cell
(2)
Plant cell
(2)
Root
(2)
Adipose tissue
(1)
Adipose-derived stem cell
(1)
B cell
(1)
Bark
(1)
Blood
(1)
Blood plasma
(1)
Bone
(1)
Bone marrow stem cell
(1)
Bone matrix
(1)
Brain
(1)
Cell suspension culture
(1)
Colon
(1)
Early embryonic cell
(1)
Embryo
(1)
Eosinophil differentiation
(1)
Excretion
(1)
Leaf
(1)
Lung neuroendocrine cell
(1)
Mesenchymal cell
(1)
Muscle
(1)
Secretion
(1)
Disease
Disease free
(3)
Acute leukemia
(2)
Not applicable
(1)
Glioma
(1)
Chronic granulomatous disease
(1)
IBDV infected
(1)
Mastitis
(1)
Carcinoma
(1)
COVID-19
(1)
Cardiovascular system disease
(1)
Lymphoma
(1)
Neurodevelopmental delay
(1)
Small cell carcinoma
(1)
Technology Type
Mass Spectrometry
(41)
Shotgun proteomics
(28)
Mass spectrometry
(13)
Affinity purification coupled with mass spectrometry proteomics
(6)
Data-dependent acquisition
(6)
Bottom-up proteomics
(4)
Illumina HiSeq 2000
(3)
Gel-based experiment
(3)
NMR spectroscopy
(2)
ILLUMINA, Illumina HiSeq 2000
(1)
Illumina MiSeq
(1)
Affinity proteomics
(1)
All-ion fragmentation
(1)
Chemical cross-linking coupled with mass spectrometry proteomics
(1)
Data-independent acquisition
(1)
DiaPASEF
(1)
SWATH MS
(1)
Top-down proteomics
(1)
Instrument Platform
API 4000 QTRAP (AB Sciex)
(4)
LTQ
(3)
Direct infusion MS - positive
(3)
Illumina HiSeq 2000
(2)
Illumina HiSeq 4000
(2)
Bruker maXis ESI Quadrupole TOF
(2)
Liquid Chromatography MS - negative - reverse phase
(2)
Liquid Chromatography MS - positive - reverse phase
(2)
Tandem Gas Chromatography MS -
(2)
Xevo G2 QTOF (Waters)
(2)
ScanArray 5000 [PerkinElmer]
(1)
Scanning hardware
(1)
Illumina HiSeq 2500
(1)
MS:1001911 HF
(1)
Orbitrap Fusion
(1)
Orbitrap Fusion Lumos
(1)
TripleTOF 5600
(1)
Bruker
(1)
Direct infusion MS -
(1)
Direct infusion MS - negative
(1)
LTQ Orbitrap Velos (Thermo Scientific)
(1)
Liquid Chromatography MS - negative - hilic
(1)
Nuclear Magnetic Resonance (NMR) -
(1)
Tandem Gas Chromatography MS - positive
(1)
Publication Date
2010
(15)
2016
(11)
2013
(11)
2021
(10)
2017
(9)
2012
(9)
2015
(8)
2020
(8)
2011
(6)
2025
(6)
2022
(5)
2018
(5)
2024
(5)
2019
(4)
2014
(4)
2008
(4)
2006
(4)
2023
(4)
2007
(3)
2009
(2)
2004
(2)
2026
(2)
CHEBI ID
CHEBI:25094
(5)
CHEBI:15428
(4)
CHEBI:15544
(4)
CHEBI:15547
(4)
CHEBI:15550
(4)
CHEBI:15551
(4)
CHEBI:15553
(4)
CHEBI:15555
(4)
CHEBI:15647
(4)
CHEBI:15650
(4)
CHEBI:15741
(4)
CHEBI:15843
(4)
CHEBI:15940
(4)
CHEBI:16708
(4)
CHEBI:17295
(4)
CHEBI:17368
(4)
CHEBI:19138
(4)
CHEBI:27820
(4)
CHEBI:28158
(4)
CHEBI:28300
(4)
CHEBI:28842
(4)
CHEBI:28852
(4)
CHEBI:29016
(4)
CHEBI:34450
(4)
CHEBI:34494
(4)
CHEBI:34784
(4)
CHEBI:38299
(4)
CHEBI:60943
(4)
CHEBI:63966
(4)
CHEBI:63969
(4)
Metabolite Name
10-HDoHE
(4)
11,12-DiHETrE
(4)
11-HETE
(4)
12,13-DiHOME
(4)
12,13-EpOME
(4)
12-HEPE
(4)
12-HETE
(4)
13,14dh,15k-PGD2
(4)
13,14dh,15k-PGE2
(4)
13-HDoHE
(4)
13-HODE
(4)
13-HOTrE
(4)
13-oxoODE
(4)
14,15-DiHETrE
(4)
14-HDoHE
(4)
15-HEPE
(4)
15-HETE
(4)
15-HETrE
(4)
15k-PGE2
(4)
16-HDoHE
(4)
17-HDoHE
(4)
19(20)-DiHDPA
(4)
19(20)-EpDPE
(4)
20-HDoHE
(4)
4-HDoHE
(4)
5,6-EET
(4)
5-HETE
(4)
6,15dk,13,14dh-PGF1a
(4)
6k-PGF1a
(4)
7-HDoHE
(4)
First Public Date
2017
(1)
2016
(1)
Study type
Transcription profiling by array
(48)
RNA-seq of coding RNA
(9)
RNA-seq of non coding RNA
(4)
ChIP-seq
(2)
RNA-seq of coding RNA from single cells
(2)
Transcription profiling by high throughput sequencing
(1)
Baseline
(1)
ChIP-chip by tiling array
(1)
Comparative genomic hybridization by array
(1)
Other
(1)
Release Date
2022
(333)
2021
(314)
2023
(286)
2024
(251)
2025
(243)
2020
(209)
2019
(184)
2018
(163)
2017
(127)
2016
(112)
2015
(104)
2014
(85)
2011
(59)
2012
(58)
2010
(52)
2013
(51)
2026
(42)
2009
(25)
2008
(15)
2007
(15)
2006
(11)
2005
(7)
2002
(6)
2004
(3)
2003
(1)
2001
(1)
2000
(1)
1998
(1)
1997
(1)
Lab affiliation
Departments of Chemistry, Biological Sciences, Pathology, Microbiology and Immunology, Vanderbilt University
(2)
Robert W. Holley Center for Agriculture and Health United States Department of Agriculture Agricultural Research Service
(2)
Section for Evolutionary Genomics, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark; McDonald Institute for Archaeological Research, University of Cambridge, Cambridge, UK
(2)
95 Institut de Pharmacologie et de Biologie Structurale (IPBS), Université de Toulouse, CNRS, Université Toulouse III - Paul Sabatier (UT3), Toulouse, 31077, France
(1)
Agios Pharmaceuticals 88 Sidney Street Cambridge MA 02139 USA
(1)
Ascano Lab, Biochemistry Department, Vanderbilt University, Nashville TN, USA
(1)
Baylor College of Medicine Houston, Texas
(1)
Copenhagen Center for Glycomics (CCG), Department of Cellular and Molecular Medicine, University of Copenhagen, Denmark
(1)
Department of Comparative Biology and Experimental Medicine, Faculty of Veterinary Medicine, University of Calgary; Hotchkiss Brain Institute, University of Calgary; Alberta Children’s Hospital Research Institute, University of Calgary
(1)
Department of Microbiology & Immunology UNC School of Medicine UNC-Chapel Hill
(1)
Department of Musculoskeletal and Ageing Science, Institute of Life Course and Medical Sciences, University of Liverpool, Liverpool, UK
(1)
Department of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center; Vanderbilt-Ingram Cancer Center; Vanderbilt Center for Immunobiology, and Vanderbilt Institute for Infection, Immunology, and Inflammation, Nashville, TN, 37232-2363, USA.,
(1)
Graduate School of Medical Science and Engineering, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, 34141, Korea
(1)
ISAS Otto-Hahn-Str. 6b 44227 Dortmund Germany
(1)
Indiana University School of Medicine
(1)
King’s College London and the Francis Crick Institute
(1)
Neil F. Inglis Moredun Proteomics Facility Moredun Research Institute Pentlands Science Park Bush Loan Penicuik Midlothian EH26 0PZ Tel +44 131 445 5111
(1)
Nichollas E. Scott, PhD ARC Future Fellow and Group Leader The Department of Microbiology and Immunology Level 6 - Peter Doherty Institute | The University of Melbourne | Vic | 3000 | Australia
(1)
Pharmacology Department, UNC School of Medicine, UNC-Chapel Hill
(1)
Physiology and Pharmacology, University of Calgary
(1)
Plant Biotechnology, Faculty of Biology, University of Freiburg, Schaenzlestr.1, D-79104 Freiburg, Germany
(1)
Protein Phosphorylation Laboratory, The Francis Crick Institute
(1)
Proteomic Platform Necker, PPN-3P5, Structure Fédérative de Recherche SFR Necker US24, 75015, Paris, France
(1)
Proteomics, Kymera, Inc. USA
(1)
Rapid Novor Inc
(1)
Research Officer|Proteomics and Small Molecule Mass Spectrometry Laboratory | Central Analytical Research Facility (CARF)| Queensland University of Technology | Address: Level 6, P Block, Gardens Point Campus, 2 George St Brisbane QLD 4000
(1)
Research Officer|Proteomics and Small Molecule Mass Spectrometry Laboratory | Central Analytical Research Facility (CARF)| Queensland University of Technology | Address: Level 6, P Block, Gardens Point Campus, 2 George St Brisbane QLD 4000.
(1)
Robert W Holley Center for Agriculture and Health United States Department of Agriculture Agricultural Research Service
(1)
Robert W. Holley Center United States Department of Agriculture Agricultural Research Service
(1)
School of Life Sciences University of Nottingham Nottingham UK
(1)
Tags
xref:PubMed:26657765
(1)
xref:PubMed:28763805
(1)
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Chromatin-Associated Protein Complexes Link DNA Base J and Transcription Termination in
Leishmania
.
Not available
S-EPMC8544896
|
biostudies-literature
Cite
Complete Genome Sequence of Cluster J Mycobacteriophage Superphikiman.
Not available
S-EPMC5794948
|
biostudies-literature
Cite
Structure of CbpA J-domain bound to the regulatory protein Cbpm explains its specificity and suggests evolutionary link between Cbpm and transcriptional regulators.
Not available
S-EPMC4063869
|
biostudies-literature
Cite
Comparison of [
11
C]UCB-J and [
18
F]FDG PET in Alzheimer's disease: A tracer kinetic modeling study.
Not available
S-EPMC8393289
|
biostudies-literature
Cite
impMKT: the imputed McDonald and Kreitman test, a straightforward correction that significantly increases the evidence of positive selection of the McDonald and Kreitman test at the gene level.
Not available
S-EPMC9526038
|
biostudies-literature
Cite
iMKT: the integrative McDonald and Kreitman test.
Not available
S-EPMC6602517
|
biostudies-literature
Cite
A Mononuclear Carboxylate-Rich Oxoiron(IV) Complex: a Structural and Functional Mimic of TauD Intermediate 'J'
Not available
S-EPMC3528080
|
biostudies-literature
Cite
S-nitrosylation of dimethylarginine dimethylaminohydrolase regulates enzyme activity: further interactions between nitric oxide synthase and dimethylarginine dimethylaminohydrolase.
Not available
S-EPMC129707
|
biostudies-literature
Cite
Analysis of particles from hamster lungs following pulmonary talc exposures: implications for pathogenicity.
Not available
S-EPMC7271432
|
biostudies-literature
Cite
Incorporation of the central vein sign into the McDonald criteria.
Not available
S-EPMC11779579
|
biostudies-literature
Cite
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