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TranscriptomicsTranscription profiling of human Jurkat T leukemia cells to detect anticancer metabolites discovered by computational metabolomics
CoMet, a fully automated Computational Metabolomics method to predict changes in metabolite levels in cancer cells compared to normal references has been developed and applied to Jurkat T leukemia cells with the goal of testing the following hypothesis: up or down regulation in cancer cells of the e...
ORGANISM(S): Homo sapiens 
2008-10-20 | E-GEOD-9648 | biostudies-arrayexpress
TranscriptomicsDifferential regulation of SBF and MBF target genes by genotoxic stress occurs via Rad53-dependent inactivation of the MBF correpressor Nrm1
MBF and SBF transcription factors regulate a large family of coordinately expressed G1/S genes required for early cell cycle functions including DNA replication and repair. SBF is inactivated upon S phase entry by Clb/CDK whereas MBF targets are repressed by the corepressor, Nrm1. Using genome-wide ...
ORGANISM(S): Saccharomyces cerevisiae 
2012-02-15 | E-GEOD-33695 | biostudies-arrayexpress
GenomicsH2AV_9751.OR Head Nuclei.Solexa
modENCODE_submission_5258 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of the major histone modifications across the Drosophila melanogaster genome. The modificat...
ORGANISM(S): Drosophila melanogaster 
2013-05-28 | E-GEOD-47310 | biostudies-arrayexpress
GenomicsRNA Pol II (abcam).OR Head Nuclei.Solexa
modENCODE_submission_5124 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under s...
ORGANISM(S): Drosophila melanogaster 
2013-05-28 | E-GEOD-47304 | biostudies-arrayexpress
GenomicsRNA Pol II (abcam).D.mel 3rd Instar Larvae Nuclei.Solexa
modENCODE_submission_5123 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under s...
ORGANISM(S): Drosophila melanogaster 
2013-05-28 | E-GEOD-47303 | biostudies-arrayexpress
GenomicsH2AV_9751.D.mel 3rd Instar Larvae Nuclei.Solexa
modENCODE_submission_4953 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of the major histone modifications across the Drosophila melanogaster genome. The modificat...
ORGANISM(S): Drosophila melanogaster 
2013-05-28 | E-GEOD-47259 | biostudies-arrayexpress
GenomicsdMi-2(Q4443).14-16 hr OR embryo.Solexa
modENCODE_submission_5070 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under s...
ORGANISM(S): Drosophila melanogaster 
2013-05-28 | E-GEOD-47265 | biostudies-arrayexpress
GenomicsSolexa.Psc.14-16 hr OR embryo
modENCODE_submission_3960 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under s...
ORGANISM(S): Drosophila melanogaster 
2013-05-28 | E-GEOD-47235 | biostudies-arrayexpress
GenomicsRNA Pol II (abcam).14-16 hr OR embryo.Solexa
modENCODE_submission_5122 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under s...
ORGANISM(S): Drosophila melanogaster 
2013-05-28 | E-GEOD-47302 | biostudies-arrayexpress
GenomicsH2AV_9751.14-16 hr OR embryo.Solexa
modENCODE_submission_5075 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of the major histone modifications across the Drosophila melanogaster genome. The modificat...
ORGANISM(S): Drosophila melanogaster 
2013-05-28 | E-GEOD-47268 | biostudies-arrayexpress
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