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TranscriptomicsRNA Capture-Seq resolves the deep complexity of the human transcriptome (454)
Transcriptomic analyses have revealed an unexpected complexity of the human transcriptome, whose breadth and depth exceeds current RNA sequencing capacity 1-3. Here we combine tiling arrays and RNA sequencing technologies, in an approach we term RNA Capture-Seq, to enable the assembly and characteri...
ORGANISM(S): Homo sapiens 
2011-09-12 | E-GEOD-29040 | biostudies-arrayexpress
TranscriptomicsThe human mitochondrial transcriptome
The human mitochondrial genome comprises a distinct genetic system transcribed as precursor polycistronic transcripts that are subsequently cleaved to generate individual mRNAs, tRNAs and rRNAs. Here we provide a comprehensive analysis of the human mitochondrial transcriptome across multiple cell li...
ORGANISM(S): Homo sapiens 
2011-07-20 | E-GEOD-30772 | biostudies-arrayexpress
TranscriptomicsNext Generation Sequencing Analysis of Saccharopolyspora erytharea transcriptomes
We report the high-throughput profiling of saccharopolyspora erythraea life cycle in bioreactors. RNA was harvested at seven time-points from bioreactors, three points immediately before, one during and three following the metabolic switch (as evidenced by biomass cell dry weight). We prepared unstr...
ORGANISM(S): Saccharopolyspora erythraea 
2013-06-18 | E-GEOD-39722 | biostudies-arrayexpress
TranscriptomicsRNA Capture-Seq resolves the deep complexity of the human transcriptome (Illumina)
Transcriptomic analyses have revealed an unexpected complexity of the human transcriptome, whose breadth and depth exceeds current RNA sequencing capacity 1-3. Here we combine tiling arrays and RNA sequencing technologies, in an approach we term RNA Capture-Seq, to enable the assembly and characteri...
ORGANISM(S): Homo sapiens 
2011-09-12 | E-GEOD-29038 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse ventral forebrain cells in neuronal-glial fate specification and oligodendrocyte lineage maturation
This experiment compared the expression of mRNAs and noncoding RNAs during neuronal-glial fate specification and oligodendrocyte lineage maturation. The primary aim of the experiment was to identify ncRNAs that were differentially expressed during this process.
ORGANISM(S): Mus musculus 
2010-01-07 | E-TABM-874 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse naive and memory CD8+ T cells
This experiment compared the expression of mRNAs and noncoding RNAs between naive and memory CD8+ T cells, with the primary aim of identifying noncoding RNAs that were dynamically regulated during T cell differentiation.
ORGANISM(S): Mus musculus 
2008-11-01 | E-TABM-492 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse resting and activated CD8+ T cells
This experiment compared the expression of mRNAs and noncoding RNAs between resting and activated CD8+ effector T cells, with the primary aim of identifying noncoding RNAs that were dynamically regulated during T cell activation.
ORGANISM(S): Mus musculus 
2008-11-01 | E-TABM-491 | biostudies-arrayexpress
TranscriptomicsMouse adult mammary development
Mouse adult mammary development
ORGANISM(S): Mus musculus 
2011-02-01 | E-TABM-1106 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of mouse ovary development to compare the expression of mRNAs and noncoding RNAs
This experiment compared the expression of mRNAs and noncoding RNAs during the development of mouse ovary. The primary aim of the experiment was to identify ncRNAs that were differentially expressed during this process.
ORGANISM(S): Mus musculus 
2010-05-12 | E-TABM-986 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of mouse testis development to compare the expression of mRNAs and noncoding RNAs
This experiment compared the expression of mRNAs and noncoding RNAs during the development of mouse testis. The primary aim of the experiment was to identify ncRNAs that were differentially expressed during this process.
ORGANISM(S): Mus musculus 
2010-05-12 | E-TABM-985 | biostudies-arrayexpress
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