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TranscriptomicsExpression data from 29-day old Arabidopsis plants
Metal oxide engineered nanoparticles, which are widely used in diverse applications, are known to impact terrestrial plants. These nanoparticles have a potential to induce changes in plant tissue transcriptomes, and thereby the productivity. Here we looked at how the two commonly used nanoparticles...
ORGANISM(S): Arabidopsis thaliana 
2016-05-31 | E-GEOD-80461 | biostudies-arrayexpress
GenomicsGrowth response of bacteria on metal oxide nanoparticles by RNA-Seq analysis
Growth response of bacteria on metal oxide nanoparticles by RNA-Seq analysis
PRJNA822624 | ENA
TranscriptomicsThe effect of CuO nanoparticles on gene expression patterns in Daphnia magna
There is still a lot of contradiction on whether metal ions are solely responsible for the observed the toxicity of ZnO and CuO nanoparticles to aquatic species. While most tests have studied nanoparticle effects at organismal levels (e.g. mortality, reproduction), effects at suborganismal levels ma...
ORGANISM(S): Daphnia magna 
2014-03-01 | E-GEOD-54738 | biostudies-arrayexpress
TranscriptomicsThe effect of ZnO nanoparticles on gene expression patterns in Daphnia magna
There is still a lot of contradiction on whether metal ions are solely responsible for the observed the toxicity of ZnO and CuO nanoparticles to aquatic species. While most tests have studied nanoparticle effects at organismal levels (e.g. mortality, reproduction), effects at suborganismal levels ma...
ORGANISM(S): Daphnia magna 
2014-03-01 | E-GEOD-54736 | biostudies-arrayexpress
TranscriptomicsRNAseq of human epithelial lung carcinoma cell line A549 exposed to ceria, silver or zinc ions, micron-sized particles or nanoparticles
The toxicity of silver and zinc oxide nanoparticles is hypothesised to be mediated by dissolved metal ions and cerium dioxide nanoparticles (CeO2 NPs) are hypothesised to induce toxicity specifically by oxidative stress dependant on their surface redox state. To test these hypotheses, RNAseq was app...
ORGANISM(S): Homo sapiens 
2018-02-01 | E-MTAB-5734 | biostudies-arrayexpress
ProteomicsFast and robust proteome screening platform identifies neutrophil extracellular trap formation in the lung in response to cobalt ferrite nanoparticles
The goal of this study was to investigate the effects of magnetic iron cobalt oxide nanoparticles (cobalt doped Fe3O4 nanoparticles with increasing amounts of cobalt) after pulmonary exposure while in parallel presenting a proteomics platform that is easily transferable to large-scale nanotoxicology...
ORGANISM(S): Mus musculus (Mouse) 
2020-03-26 | PXD016148 | Pride
Tmt Iron cobalt oxide nanoparticles Balf Lung Clinical proteomics Nanoparticles Mouse Murine Label-free Metal oxide nanoparticles Bronchoalveolar lavage fluid 
TranscriptomicsGene expression profile in zebrafish D. rerio exposed to metal oxidate nanoparticles
Metal oxide nanoparticles can exert adverse effects on humans and aquatic organisms. However, the toxic effects and mechanisms of MO-NPs are not clearly understood.We investigated the toxic effects and mechanisms of copper oxide, zinc oxide, and nickel oxide nanoparticles in Danio rerio using microa...
ORGANISM(S): Danio rerio 
2018-03-20 | GSE112016 | GEO
Genomics
Metagenomic sequencing of metal oxide nanoparticles stimulated sediments
PRJNA758541 | ENA
TranscriptomicsGrowth response of bacteria on metal oxide nanoparticles by RNA-Seq analysis
Purpose: Next-generation sequencing (NGS) has revolutionized systems-based analysis of cellular pathways. The goals of this study are to compare NGS-derived B. coagulans transcriptome profiling (RNA-seq) of both control and treatment (treated with metal oxide nanoparticle)
ORGANISM(S): Heyndrickxia coagulans 
2025-04-11 | GSE200007 | GEO
Genomicssoil metagenome
Soil contaminated with metal oxide nanoparticles Metagenome
PRJNA171536 | ENA
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