Miao J J - OmicsDI

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Unknown (5164)
Proteomics (143)
Transcriptomics (25)
Metabolomics (17)
Genomics (14)
Models (4)
Multiomics (2)
Other (1)

Organisms

Homo sapiens (81)
Mus musculus (31)
Plasmodium falciparum 3D7 (10)
Tetrahymena thermophila (7)
Plasmodium falciparum (5)
Oryza sativa (5)
Rattus norvegicus (3)
Drosophila melanogaster (3)
Saccharomyces cerevisiae (2)
Azumapecten farreri (2)
Capra hircus (2)
Pyricularia oryzae 70-15 (2)
Streptococcus pneumoniae D39 (2)
Alphainfluenzavirus (1)
Influenza A virus (A/X-31(H3N2)) (1)
Murinae (1)
Gossypium hirsutum (1)
Bombyx mori (1)
Macaca mulatta (1)
Arabidopsis thaliana (1)
Cucumis sativus (1)
Haemaphysalis longicornis (1)
Haloferax volcanii (1)
Nostoc sp. PCC 7120 = FACHB-418 (1)
Pasteurella multocida subsp. multocida str. Anand1_cattle (1)
Schistosomatidae sp. W688 (1)
Schistosomatidae sp. W829 (1)
Zea mays (1)
Bos grunniens (1)
Camellia sinensis (1)

Organisms

Plasmodium falciparum (2)
Plasmodium falciparum 3D7 (1)

Repository

pride (84)
iProX (57)
biostudies-arrayexpress (23)
MetaboLights (16)
EGA (10)
BioModels (4)
geo (3)
ENA (3)
GNPS (1)
jPOST (1)
MassIVE (1)
PanoramaPublic (1)

Tissue

Cell culture (11)
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Epithelial cell of lung (1)
Epithelium of stomach (1)

Disease

Plasmodium falciparum malaria (7)
Multiple myeloma (4)
Colon cancer (3)
Breast cancer (2)
Renal cell carcinoma (2)
Influenza (1)
Avian influenza (1)
Chronic obstructive pulmonary disease (1)
Depression (1)
Disease free (1)
Malaria (1)
Mastitis (1)
Stomach cancer (1)

Technology Type

Mass Spectrometry (84)
Shotgun proteomics (39)
Mass spectrometry (13)
Affinity purification coupled with mass spectrometry proteomics (13)
Bottom-up proteomics (9)
Data-dependent acquisition (9)
Gel-based experiment (8)
SWATH MS (4)
Mass spectrometry assay (3)
Data-independent acquisition (3)
Illumina HiSeq 2000, ILLUMINA (2)
Illumina HiSeq 2000 (1)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Mass spectrometry imaging (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (7)
Liquid Chromatography MS - positive - reverse phase (5)
Illumina HiSeq 4000 (2)
Bruker maXis ESI Quadrupole TOF (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive (2)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
Direct infusion MS - negative (1)
Flow injection analysis MS - (1)
Gas Chromatography MS - (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2022 (36)
2024 (29)
2025 (25)
2021 (21)
2023 (14)
2026 (12)
2019 (11)
2020 (9)
2018 (7)
2012 (4)
2016 (3)
2015 (3)
2014 (3)
2011 (3)
2013 (2)
2010 (2)
2008 (2)
2005 (2)
2017 (2)
2009 (1)

CHEBI ID

CHEBI:15756 (9)
CHEBI:15891 (8)
CHEBI:16196 (7)
CHEBI:16335 (7)
CHEBI:16708 (7)
CHEBI:16737 (7)
CHEBI:17351 (7)
CHEBI:28842 (7)
CHEBI:16704 (6)
CHEBI:16755 (6)
CHEBI:17154 (6)
CHEBI:17368 (6)
CHEBI:17509 (6)
CHEBI:17562 (6)
CHEBI:17568 (6)
CHEBI:17596 (6)
CHEBI:17750 (6)
CHEBI:28834 (6)
CHEBI:30769 (6)
CHEBI:30805 (6)
CHEBI:7916 (6)
CHEBI:15354 (5)
CHEBI:15971 (5)
CHEBI:16040 (5)
CHEBI:16359 (5)
CHEBI:16750 (5)
CHEBI:16857 (5)
CHEBI:17203 (5)
CHEBI:17268 (5)
CHEBI:17295 (5)

Metabolite Name

Taurine (8)
Creatinine (6)
Deoxycholic acid (6)
Linoleic acid (6)
Oleic acid (6)
Palmitic acid (6)
Carnosine (5)
Dodecanoic acid (5)
Ornithine (5)
Pantothenic acid (5)
Stearic acid (5)
Uracil (5)
Uridine (5)
Adenosine (4)
Chenodeoxycholic acid (4)
Cholic acid (4)
Citric acid (4)
Guanosine (4)
Hydrogen phosphate (4)
Hypoxanthine (4)
Inosine (4)
Isocitric acid (4)
Kynurenic acid (4)
Pyroglutamic acid (4)
Pyrrolidonecarboxylic acid (4)
Sorbitol (4)
1-Aminocyclopropanecarboxylic acid (3)
1-Methylhistidine (3)
12-Hydroxydodecanoic acid (3)
2-Ketobutyric acid (3)

First Public Date

2016 (2)
2014 (1)

Modelling Approach

Ordinary differential equation model (4)

Lab affiliation

Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Key Laboratory of Saline-alkali Vegetation Ecology Restoration in Oil Field, Ministry of Education, Harbin 150040, China (4)
Department of Immunology, College of Basic Medical Science, China Medical University, Shenyang, Liaoning 110122, China (3)
Dept. of Laboratory Medicine, University of California, San Francisco, CA (3)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University, Guangzhou 510632, China (3)
College of Agronomy, Jiangxi Agricultural University (2)
College of Pharmacy, Jinan University, Guangzhou, China (2)
Division of Infectious Diseases and International Medicine Department of Internal Medicine Morsani College of Medicine University of South Florida (2)
Faculty of Health Sciences, University of Macau, Macau, China (2)
Hebei Medical University (2)
Jiangsu Academy of Agricultural Sciences (2)
Shanghai Institute of Thoracic Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai 200030 (2)
1Department of Chemistry, Georgia State University, Atlanta, GA (1)
1Department of Chemistry, University of California, Riverside (1)
Beijing Institute of Genomics, Chinese Academy of Sciences. China National Center for Bioinformation (1)
CARL J. HERZOG PROFESSOR OF DERMATOLOGY STANFORD UNIVERSITY SCHOOL OF MEDICINE, STANFORD, CA 94305 (1)
CAS Center for Excellence in Molecular Plant Science, Chinese Academic on Science (1)
Center for Translational Research in Hematological Malignancies, Houston Methodist Neal Cancer Center, Houston Methodist Academic Institute (1)
Changchun Veterinary Research Institute (1)
Children's Hospital of Nanjing Medical University (1)
College of Animal Science and Technology, Qingdao Agricultural University, China (1)
College of Horticulture, Hunan Agricultural University (1)
College of Marine Life Sciences, Ocean University of China, Qingdao, China (1)
College of Veterinary Medicine, South China Agricultural University, Guangzhou, China (1)
Department of Brain Sciences, Division of Neuroscience, Imperial College London, London, UK (1)
Department of Chromosome Biology, Max F. Perutz Laboratories, University of Vienna, Vienna BioCenter, Austria (1)
Department of Entomology, Pennsylvania State University, USA (1)
Department of Internal Medicine, Morsani College of Medicine, University of South Florida (1)
Department of Internal Medicine, Morsani College of Medicine, University of South Florida, Tampa, Florida, USA (1)
Department of Molecular Genetics, Erasmus University Medical Center, Rotterdam, The Netherlands. Erasmus MC Cancer Institute, The Netherlands. Oncode Institute, Utrecht, The Netherlands. (1)
Dept of Internal Medicine, Morsani College of Medicine, University of South Florida (1)

IsPrivate

False (4)

Classification

protozoa (3)

Modification

N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (13)
RNA-seq of coding RNA (3)
Transcription profiling by SAGE (2)
Baseline (1)
Unknown experiment type (1)
Differential (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (838)
2022 (715)
2023 (694)
2024 (679)
2021 (508)
2020 (383)
2019 (296)
2018 (213)
2017 (190)
2016 (141)
2026 (115)
2015 (107)
2014 (103)
2013 (63)
2012 (42)
2009 (29)
2010 (28)
2011 (18)
2008 (13)
2005 (5)
2007 (2)
2001 (2)
2006 (1)
2004 (1)
1996 (1)

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The histone methyltransferase Setd2 is indispensable for V(D)J recombination.

Not available

S-EPMC6659703 | biostudies-literature

Association of 5p15.2 and 15q14 with high myopia in Tujia and Miao Chinese populations.

Not available

S-EPMC7318420 | biostudies-literature

Expression analysis of Plasmodium falciparum 3D7 delta-PfPuf2 mutant

Investigation of whole genome gene expression level changes in Plasmodium falciparum 3D7 delta-PfPuf2 mutant, compared to the wild-type strain 3D7. The mutation engineered into this strain render tanslational control. The mutants analyzed in this study are further described in Miao J, Li J, Fan Q, L...

ORGANISM(S): Plasmodium falciparum 3D7

2012-07-06 | GSE39124 | GEO

Expression analysis of Plasmodium falciparum 3D7 delta-PfPuf2 mutant

ORGANISM(S): Plasmodium falciparum 3D7

2012-07-05 | E-GEOD-39124 | biostudies-arrayexpress

Establishment and Application of a Real-Time Recombinase Polymerase Amplification Assay for the Detection of Avian Leukosis Virus Subgroup J.

Not available

S-EPMC9301284 | biostudies-literature

Gene expression and alternative splicing reveal the co-regulation of host response mechanisms to avian leukosis virus subgroup J-infected in laying hens.

Not available

S-EPMC12329114 | biostudies-literature

Next generation sequencing analysis of transcriptomes of Plasmodium falciparum male and female gametocytes

Investigation of overall expression level in Plasmodium falciparum male and female mature gametocytes, and detection of any transcriptional differences between male and female gametocytes. The Plasmodium falciparum parasite with green fluorescent protein (GFP) expression under the control of alpha t...

ORGANISM(S): Plasmodium falciparum

2016-01-30 | GSE77398 | GEO

Expression analysis of Plasmodium falciparum male and female gametocytes

Investigation of whole genome gene expression level in Plasmodium falciparum male and female mature gametocytes, and detection of any transcriptional differences between male and female gametocytes. The Plasmodium falciparum parasite with green fluorescent protein (GFP) expression under the control ...

ORGANISM(S): Plasmodium falciparum

2016-01-28 | GSE77316 | GEO

Optogenetic cortical spreading depression originating from the primary visual cortex induces migraine-like pain and anxiety behaviors in freely moving C57BL/6 J mice.

Not available

S-EPMC11866570 | biostudies-literature

Additive interaction between potentially modifiable risk factors and ethnicity among individuals in the Han, Tujia and Miao populations with first-ever ischaemic stroke.

Not available

S-EPMC8173719 | biostudies-literature

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