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TranscriptomicsTranscription profiling by array of Streptomyces coelicolor actinorhodin-producing wild type andrecombinant strains
Genome-wide expression analysis of 6 batch cultivations of actinorhodin-producing wild type and recombinant strain of Streptomyces coelicolor
ORGANISM(S): Streptomyces coelicolor A3(2) 
2010-05-25 | E-MTAB-306 | biostudies-arrayexpress
ProteomicsAntimicrobial activity of graphene oxide is associated with alteration in stress response and membrane proteins
The aim of this study was to explore the mode of action of GO, via an in-depth proteomics analysis, on the protein expression of targeted bacteria. For this purpose, samples of Staphylococcus aureus were grown in the presence of GO and samples were collected from different growth phases to examine c...
ORGANISM(S): Staphylococcus aureus 
2023-01-19 | PXD036796 | Pride
Graphene oxide  antimicrobial activity  membrane disruption  oxidative stress  proteomics 
ProteomicsTryptic shaving of Staphylococcus aureus
Surface proteins of Gram-positive bacteria are critical for adherence to host tissues, evasion of the immune system, and interaction with the environment. They can be utilized as biomarkers in diagnostics, for vaccine development, and as therapeutic targets due to their accessibility and role in pat...
ORGANISM(S): Bacteria Staphylococcus aureus 
2025-09-15 | PXD061994 | Pride
Diagnostic peptides Surface proteins Staphylococcus aureus Tryptic shaving Proteomics 
ProteomicsThe global acetylome of the human pathogen Vibrio cholerae V52 reveals lysine acetylation of major transcriptional regulators
Protein lysine acetylation is recognized as an important reversible post translational modification in all domains of life. While its primary roles appear to reside in metabolic processes, lysine acetylation has also been implicated in regulating pathogenesis in bacteria. By now, several global lysi...
ORGANISM(S): Vibrio cholerae V52 
2018-01-02 | PXD008055 | Pride
Lysine acetylation Acetylome Vibrio cholerae Mass spectrometry Bacteria Proteomics Pathogen 
ProteomicsTyrosine 601 of Bacillus subtilis DnaK undergoes phosphorylation and is crucial for chaperone activity and heat shock survival
In order to screen for cellular substrates of the Bacillus subtilis BY-kinase PtkA, and its cognate phosphotyrosine-protein phosphatase PtpZ, we performed a triple SILAC-based quantitative phosphoproteome analysis. Detected tyrosine phosphorylation sites for which the phosphorylation level decreased...
ORGANISM(S): Bacillus subtilis 
2016-05-09 | PXD003764 | Pride
Molecular chaperons Silac Protein phosphorylation Quantitative phosphoproteomics Bacterial protein-tyrosine kinases Protein folding 
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