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Gould2011 - Temperature Sensitive Circadian Clock This model is a temperature sensitive version of Pokhilko et al.  2010 (PMID: 20865009), which is BIOMD0000000273 in BioModels. This model is described in the article: Network balance via CRY signalling controls the Arabidopsis circa...
2024-09-02 | BIOMD0000000564 | BioModels
This a model from the article: Prediction of photoperiodic regulators from quantitative gene circuit models. Salazar JD, Saithong T, Brown PE, Foreman J, Locke JC, Halliday KJ, Carré IA, Rand DA, Millar AJ Cell 2009 Dec; 139(6): 1170-9 20005809 ...
2005-01-01 | MODEL1005050000 | BioModels
Flis2015 - Plant clock gene circuit (P2011.1.2 PLM_71 ver 1) This model is described in the article: Defining the robust behaviour of the plant clock gene circuit with absolute RNA timeseries and open infrastructure. Flis A, Fernández AP, Zielinski T, Mengin V, Sulpice R, St...
2024-09-02 | BIOMD0000000597 | BioModels
This model is from the article: Multiple light inputs to a simple clock circuit allow complex biological rhythms Troein C, Corellou F, Dixon LE, van Ooijen G, O'Neill JS, Bouget FY, Millar AJ. Plant J.2011 Apr;66(2):375-85. 21219507, Abstract: ...
2024-09-02 | BIOMD0000000350 | BioModels
Proteomics and phosphoproteomics analyses of circadian time course samples of Arabidopsis thaliana rosettes (22 DAS) in constant light. Two independent experiments, with global proteomics and phosphoproteomics analyses for each. Experiment I has a time point every 4h from ZT12 to ZT32, experiment 2 ...
ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702) 
2018-03-16 | MSV000082175 | MassIVE
Interaction proteomics time course over 24h every 4h, looking for novel interactors of the circadian clock and flowering time protein GIGANTEA. Plants expressing 35S:GIGANTEA:3xFlag6His were used, as well as WT plants for a background control.
ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702) 
2017-07-03 | MSV000081217 | MassIVE
This model is from the article: The clock gene circuit in Arabidopsis includes a repressilator with additional feedback loops Pokhilko A, Fernández AP, Edwards KD, Southern MM, Halliday KJ, Millar AJ. Mol Syst Biol.2012 Mar 6;8:574. 22395476, Abs...
2024-09-02 | BIOMD0000000412 | BioModels
This a model from the article: Data assimilation constrains new connections and components in a complex, eukaryotic circadian clock model. Pokhilko A, Hodge SK, Stratford K, Knox K, Edwards KD, Thomson AW, Mizuno T, Millar AJ. Mol Syst Biol.2010 Sep 21;6:416. 2...
2024-09-02 | BIOMD0000000273 | BioModels
This a model from the article: Isoform switching facilitates period control in the Neurospora crassa circadian clock. Akman OE, Locke JC, Tang S, Carré I, Millar AJ, Rand DA Mol. Syst. Biol. 2008;Vol 4: 164 18277380 , ...
2024-09-02 | BIOMD0000000295 | BioModels
Pokhilko2013 - TOC1 signalling in Arabidopsis circadian clock In this model, Pokhilko et al. has incorporated the negative transcriptional regulations of the core clock genes by TOC1 and the up-regulation of TOC1 expression by ABA signalling, to their previous model BIOMD0000000412 ...
2024-09-02 | BIOMD0000000445 | BioModels
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