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TranscriptomicsPearl millet seedlings infected with rust, or treated with MeJA or SA
This SuperSeries is composed of the following subset Series: GSE13478: Pearl millet seedlings treated with methyl jasmonate (MeJA) GSE13479: Pearl millet seedlings infected with rust (Puccinia substriata) GSE13480: Pearl millet seedlings treated with salicylic acid (SA) Refer to individual Series
ORGANISM(S): Pennisetum glaucum 
2010-05-14 | E-GEOD-13481 | biostudies-arrayexpress
TranscriptomicsPearl millet seedlings infected with rust (Puccinia substriata)
Transcriptional profiling of rust-infected pearl millet seedlings over time [0h, 20h, 5d and 8d post infection (pi)]. Keywords: Time course, Stress response Loop design. All time points compared with time = 0 h in data analysis. Two biological replicates per sample, and one technical dye swap rep...
ORGANISM(S): Pennisetum glaucum 
2010-05-14 | E-GEOD-13479 | biostudies-arrayexpress
TranscriptomicsPearl millet seedlings treated with methyl jasmonate (MeJA)
Transcriptional profiling of MeJA-treated pearl millet seedlings over time [0, 12, 24 and 48 hours post treatment (hpt)]. Keywords: Time course, Stress response Loop design. All time points compared with time = 0 h in data analysis. Two biological replicates per sample, and one technical dye swap...
ORGANISM(S): Pennisetum glaucum 
2010-05-14 | E-GEOD-13478 | biostudies-arrayexpress
TranscriptomicsPearl millet seedlings treated with salicylic acid (SA)
Transcriptional profiling of SA-treated pearl millet seedlings over time [0, 12, 24 and 48 hours post treatment (hpt)]. Keywords: Time course, Stress response Loop design. All time points compared with time = 0 h in data analysis. Two biological replicates per sample, and one technical dye swap r...
ORGANISM(S): Pennisetum glaucum 
2010-05-14 | E-GEOD-13480 | biostudies-arrayexpress
TranscriptomicsTranscriptome sequencing of Foxtail millet Setaria italica for different tissues
Transcriptome sequencing of Foxtail millet Setaria italica (Zhang-gu) for different tissues. Four RNA pools were created corresponding to four different tissues: root, leaf, stem, spica (tassel) at developmental stage, then each pool was sequenced.
ORGANISM(S): Setaria italica 
2012-03-31 | E-GEOD-36391 | biostudies-arrayexpress
ProteomicsQuantitative Proteomic and Phosphoproteomic profilings of two foxtail millet cultivars under salinity
In this project, comprehensive proteomic and phosphoproteomic analysis was performed to explore sophisticated responsive networks of foxtail millet varieties of An04 and Yugu2 under salinity. Isobaric tags for relative and absolute quantitation-based (iTRAQ) and tandem mass tags-based (TMTs) quantit...
ORGANISM(S): Setaria italica 
2022-02-17 | PXD025969 | Pride
Foxtail millet (setaria italica)  salt stress  proteomic and phosphoproteomic  phosphorylation  lc-ms/ms 
ProteomicsTranscriptomics-proteomics analysis reveals the role of SiNRX1 in regulating drought stress in foxtail millet (Setaria italica L.)
the SiNRX1 of foxtail millet was knocked out by means of the CRISPR/Cas9 technology, and the drought resistance of SiNRX1 was identified at both the germination stage and the seedling stage. Moreover, through transcriptome sequencing and Data-independent acquisition (DIA) quantitative proteomics det...
ORGANISM(S): Setaria italica 
2025-09-12 | PXD063797 | Pride
Foxtail millet  drought  sinrx1  rna-seq  proteomics 
UnknownIntegration of multi-omics data and phenotyping provides insights into purple leaf sheaths color in millet seedling stage.
Not available
S-EPMC12659051 | biostudies-literature
ProteomicsIntegrated physiological and comparative proteomics analysis of contrasting genotypes of pearl millet reveals underlying salt-responsive mechanisms
Salinity stress poses a significant risk to agricultural yield and productivity. Therefore, elucidation of plant salt-response mechanisms has become essential to identify stress-tolerance genes. In the present study, two pearl millet genotypes with contrasting salt-tolerance showed differential morp...
ORGANISM(S): Pennisetum americanum (Pearl millet) (Pennisetum glaucum) 
2022-05-09 | PXD025592 | Pride
Comparative proteomics  contrasting genotype  differential protein expression  pearl millet  salinity tolerance  stress signaling 
OtherThe m6A epitranscriptomic landscape of Setaria viridis and the domesticated foxtail millet (S. italica)
N6-methyladenosine (m6A) is a pivotal epitranscriptomic modification that regulates mRNA metabolism and plays critical roles in plant growth and environmental responses. However, the evolution and roles of m6A modifications in plant domestication remain largely unexplored. This study combined RNA-se...
ORGANISM(S): Setaria viridis Setaria italica 
2026-08-23 | GSE344096 | GEO
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