Min Wei W - OmicsDI

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Unknown (373)
Proteomics (239)
Transcriptomics (197)
Metabolomics (69)
Genomics (43)
Multiomics (3)

Organisms

Homo sapiens (117)
Mus musculus (64)
Rattus norvegicus (9)
Arabidopsis thaliana (8)
Saccharomyces cerevisiae (6)
Moraxella catarrhalis (4)
Ovis aries (4)
Drosophila melanogaster (4)
Bombyx mori (4)
Staphylococcus aureus (4)
Gossypium hirsutum (3)
Yersinia pestis (3)
Escherichia coli (3)
Coprinopsis cinerea (2)
Solanum lycopersicum (2)
Oryza sativa Japonica Group (2)
Triticum aestivum (2)
Canis lupus familiaris (2)
Bupleurum scorzonerifolium (1)
Mycobacterium avium subsp. paratuberculosis K-10 (1)
Aquilaria sinensis (1)
Agrobacterium sp. 31749 (1)
Rhodopseudomonas palustris (1)
Urocitellus parryii (1)
Campylobacter coli (1)
Tetrahymena thermophila (1)
Leishmania donovani (1)
Mycobacterium avium subsp. paratuberculosis (1)
Mytilus edulis (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)

Repository

biostudies-arrayexpress (230)
pride (196)
MetaboLights (68)
iProX (31)
EGA (11)
MassIVE (6)
jPOST (5)
GNPS (1)

Tissue

Cell culture (45)
Brain (22)
Epithelial cell (18)
Liver (11)
Whole body (9)
Stem cell (8)
Blood plasma (7)
Leaf (7)
Plant cell (7)
Permanent cell line cell (6)
Blood serum (5)
Testis (5)
B cell (4)
Macrophage (4)
Cell suspension culture (3)
Heart (3)
Hepatocyte (3)
Lung (3)
Neutrophil (3)
Blood cell (2)
Colon (2)
Colonic mucosa (2)
Embryo (2)
Root (2)
T cell (2)
Urine (2)
Anther (1)
JURKAT cell (1)
T-cell acute lymphoblastic leukemia cell (1)
T-lymphocyte cell line (1)

Disease

Prostate adenocarcinoma (8)
Colon cancer (6)
Alzheimer's disease (5)
Breast cancer (4)
Acute leukemia (3)
Normal (2)
Brain cancer (2)
Disease free (2)
Parkinson's disease (2)
Temporal lobe epilepsy (2)
Psoriasis (1)
Abnormality of prenatal development or birth (1)
Brain glioblastoma multiforme (1)
Brain ischemia (1)
Buruli ulcer disease (1)
Cervix carcinoma (1)
Cognitive disorder (1)
Cytochrome-c oxidase deficiency disease (1)
Glioblastoma (1)
Liver cancer (1)
Lung benign neoplasm (1)
Lung cancer (1)
Lung carcinoma (1)
Osteoporosis (1)
Pancreatic ductal adenocarcinoma (1)
Polycystic Kidney (1)
Rett syndrome (1)
Type 1 diabetes mellitus (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (196)
Shotgun proteomics (126)
Mass spectrometry (52)
Bottom-up proteomics (22)
Data-dependent acquisition (16)
Gel-based experiment (16)
Affinity purification coupled with mass spectrometry proteomics (12)
Mass spectrometry assay (11)
Top-down proteomics (10)
SWATH MS (6)
NMR spectroscopy (5)
Data-independent acquisition (5)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
SRM/MRM (2)
All-ion fragmentation (1)
MSE (1)
Mass spectrometry imaging (1)
RNA mass spectrometry (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (21)
Liquid Chromatography MS - positive - reverse phase (17)
Illumina NovaSeq 6000 (13)
Liquid Chromatography MS - negative - hilic (8)
Liquid Chromatography MS - positive - hilic (8)
Illumina HiSeq 2000 (5)
Gas Chromatography MS - positive (5)
Liquid Chromatography MS - negative (5)
Liquid Chromatography MS - positive (4)
Liquid Chromatography MS - alternating - reverse phase (4)
Illumina HiSeq 2500 (3)
NextSeq 500 (3)
MS:1000031 (3)
Gas Chromatography MS - Positive (GC-MS (Positive)) (3)
Q Exactive (3)
Bruker (3)
MA900, Sony (2)
10x Chromium Controller (2)
HiSeq X Ten (2)
Q Exactive HF (2)
TOF Pegasus HT (LECO) (2)
Liquid Chromatography MS - alternating (2)
AB SOLiD 4 System (1)
ScanArray 4000XL [PerkinElmer] (1)
Scanning hardware (1)
Illumina NovaSeq X (1)
MinION (1)
Illumina HiSeq 3000 (1)
LTQ Orbitrap Elite (1)
Orbitrap Fusion Lumos (1)

Publication Date

2021 (56)
2022 (44)
2024 (37)
2013 (36)
2014 (33)
2016 (31)
2010 (30)
2020 (29)
2025 (28)
2015 (27)
2012 (27)
2023 (24)
2011 (22)
2019 (20)
2018 (20)
2017 (18)
2026 (16)
2008 (7)
2009 (6)
2007 (5)
2006 (2)
2005 (2)
2003 (1)

CHEBI ID

CHEBI:17368 (25)
CHEBI:30769 (24)
CHEBI:17568 (21)
CHEBI:17895 (20)
CHEBI:17295 (20)
CHEBI:15891 (19)
CHEBI:16704 (19)
CHEBI:16015 (19)
CHEBI:15741 (18)
CHEBI:17154 (18)
CHEBI:18012 (18)
CHEBI:15756 (18)
CHEBI:17533 (17)
CHEBI:15428 (17)
CHEBI:30746 (17)
CHEBI:16335 (17)
CHEBI:32816 (17)
CHEBI:16919 (17)
CHEBI:16865 (16)
CHEBI:16467 (16)
CHEBI:17203 (16)
CHEBI:16359 (16)
CHEBI:30915 (16)
CHEBI:16755 (15)
CHEBI:18257 (15)
CHEBI:16708 (15)
CHEBI:28842 (15)
CHEBI:16958 (15)
CHEBI:16566 (15)
CHEBI:17859 (15)

Metabolite Name

Hypoxanthine (19)
L-Tyrosine (17)
L-Proline (14)
Taurine (14)
Xanthine (14)
Uracil (13)
L-Histidine (13)
Adenosine (13)
Uridine (13)
L-Phenylalanine (13)
Citric acid (12)
L-Arginine (11)
Stearic acid (11)
Guanine (11)
Guanosine (11)
L-Methionine (11)
Glycine (10)
Nicotinic acid (10)
Ornithine (10)
Benzoic acid (10)
Suberic acid (10)
L-Glutamine (10)
L-Glutamate (10)
Adenine (10)
L-Serine (10)
Thymidine (10)
Creatinine (10)
L-Leucine (10)
Thymine (9)
Fumaric acid (9)

Modification

2x(15)N labeled L-lysine (1)
4-tetrahydrothiazine-3-carboxylic acid (1)
4x(15)N labeled L-arginine (1)
Not available (1)

Study type

Transcription profiling by array (121)
RNA-seq of coding RNA (35)
ChIP-seq (27)
ChIP-chip by tiling array (7)
RNA-seq of coding RNA from single cells (6)
Methylation profiling by high throughput sequencing (5)
RNA-seq of non coding RNA (5)
Comparative genomic hybridization by array (4)
ATAC-seq (3)
MicroRNA profiling by array (3)
Unknown experiment type (2)
High-throughput sequencing (2)
Methylation profiling by array (2)
Transcription profiling by SAGE (1)
MeDIP-seq (1)
Plant - High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
ChIP-chip by array (1)
Genotyping by array (1)
Other (1)
Proteomic profiling by array (1)

Release Date

2022 (63)
2021 (55)
2023 (48)
2024 (48)
2013 (43)
2025 (42)
2014 (38)
2012 (33)
2015 (32)
2010 (32)
2020 (28)
2016 (25)
2011 (25)
2019 (23)
2018 (21)
2017 (18)
2008 (7)
2009 (6)
2007 (5)
2026 (5)
2006 (2)
2005 (2)
2003 (1)
2001 (1)

Lab affiliation

National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (9)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, 5 Dong Dan San Tiao, Dongcheng District, Beijing 100005, China. (4)
The Second Hospital of Dalian Medical University (4)
Departments of Surgery and Biomedical Sciences Cedars-Sinai Medical Center Los Angeles, CA 90048 (3)
Affiliation of Qiutao Xu: State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning 530004, China (2)
Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Harbin 150040, China (2)
Cedars-Sinai Medical Center (2)
Department of Dental Implant Center, Beijing Stomatological Hospital, School of Stomatology, Capital Medical University, Beijing, China (2)
Department of Stomatology, Nanfang Hospital, Southern Medical University, Guangzhou, China, 510515 (2)
Institute of Animal Sciences, Chinese Academy of Agricultural Sciences (2)
Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, National Key Laboratory of Medical Molecular Biology & Department of Immunology (2)
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (2)
School of Engineering, Westlake University (2)
School of Medicine, Fu Jen Catholic University, New Taipei, Taiwan (2)
Shenzhen People’s Hospital (2)
State Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (2)
State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Engineering Research Center for Protein Drugs, National Center for Protein Sciences, Beijing Institute of Radiation Medicine, Beijing 102206, China (2)
Tianjin Medical University General Hospital (2)
Zhejiang University (2)
1 Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands 2 Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
1) Department of Plant Biochemistry, Ruhr University Bochum, Bochum, Germany 2) School of Biomedical and Healthcare Sciences Plymouth University Drake Circus, Plymouth Devon PL4 8AA United Kingdom (1)
1. Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands 2. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
AG Biochemie der Pflanzen (1)
Associate Professor Department of Pharmaceutical Sciences College of Pharmacy The University of Oklahoma Health Sciences Center (1)
Beijing proteome research center, Beijing, China (1)
Biological Sciences Division, Pacific Northwest National Laboratory (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands Singapore Immunology Network (SIgN), Agency for Science, Technology and Research (A*STAR), Singapore, Singapore. Department of Pharmacy, National University of Singapore, Singapore 117543, Singapore. (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands; Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands; and Singapore Immunology Network (SIgN), Agency for Science, Technology and Research (A*STAR), Singapore, Singapore. (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands. (1)

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Expression data from silkworm posterior silk glands at the late larval stages

The silkworm silk gland is one of the most efficient protein synthesis systems among all organisms. Its amazingly efficient protein synthesis makes the silk gland a desirable object for basic studies on gene expression and regulation and for biotechnological applications. At the early stages of the ...

ORGANISM(S): Bombyx mori

2012-12-05 | E-GEOD-26172 | biostudies-arrayexpress

Supraglottic jet oxygenation and ventilation improves oxygenation during endoscopic retrograde cholangiopancreatography: a randomized controlled clinical trial.

Not available

S-EPMC10785419 | biostudies-literature

Cellular responses to the oxidizing effects of bleach

E. coli MG1655 was grown in MOPS minimal glucose medium at 37 degrees C with aeration to an OD600 of 0.4 - 0.5, and HOCl was added to a final concentration of 400 ?M. 0.5 ml samples were collected in liquid nitrogen immediately before, 5 min after, and 10 min after HOCl addition, and total RNA was p...

ORGANISM(S): Escherichia coli

2013-04-10 | E-MEXP-3639 | biostudies-arrayexpress

Human umbilical cord-derived mesenchymal stem cells ameliorate perioperative neurocognitive disorder by inhibiting inflammatory responses and activating BDNF/TrkB/CREB signaling pathway in aged mice

BACKGROUND: Perioperative neurocognitive disorder (PND) is a key complication affecting older individuals after anesthesia and surgery. Failure to translate multiple pharmacological therapies for PND from preclinical studies to clinical settings has necessitated the exploration o...

2023-07-25 | MTBLS7759 | MetaboLights

Electronic Resonant Stimulated Raman Scattering Micro-Spectroscopy.

Not available

S-EPMC6425473 | biostudies-literature

PTER is an N-acetyltaurine hydrolase that regulates feeding and obesity

Taurine is a conditionally essential micronutrient and one of the most abundant amino acids in humans1-3. In endogenous taurine metabolism, dedicated enzymes are involved in biosynthesis of taurine from cysteine as well as the downstream metabolism of secondary taurine metabolites4,5. One such ta...

2024-09-11 | MTBLS10408 | MetaboLights

Inferior Temporal Gyrus in Human Ageing: a Quantitative Protein Profiling Work based on Chinese Human Brain Bank

The temporal lobe is the cerebral cortex with critical function. The superior and middle gyrus of temporal lobe have been well studied, however, present perceptions on inferior temporal gyrus remains limited. The understanding of age-related protein profile change in human inferior temporal gyrus ha...

ORGANISM(S): Homo sapiens (Human)

2015-12-07 | PXD002528 | Pride

Time course microarray data following GR activation in MCF10A-Myc breast cells

This series contain time course microarray data from MCF10A-Myc cells treated with either ethanol or Dexamethasone for 30 min, 2 hr, 4 hr, and 24 hr. This series contains three biological replicates that were analyzed as independent replicate experiments (data were normalized within each replicate e...

ORGANISM(S): Homo sapiens

2006-06-01 | E-GEOD-4917 | biostudies-arrayexpress

Investigation and source-tracing of an anthrax outbreak in Gansu Province, China.

Not available

S-EPMC6117022 | biostudies-literature

Down-regulated γ-catenin expression is associated with tumor aggressiveness in esophageal cancer.

Not available

S-EPMC4024793 | biostudies-literature

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