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ProteomicsChen Minor et al 2023 Mass Spectrometry Data
Purified protein complexes were separated by SDS-PAGE and gel lanes divided into 3 sections (A, B and C). Samples prepared in triplicate (1, 2 and 3). A nanoElute (Bruker) was attached in line to a timsTOF Pro equipped with a CaptiveSpray Source (Bruker, Hamburg, Germany). Chromatography was conduct...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
MSV000090434 | MassIVE
TranscriptomicsExpression data from H2-producing Rhodobacter sphaeroides cultures fed different organic substrates
Rhodobacter sphaeroides produces hydrogen gas (H2) via its nitrogenase enzyme during photoheterotrophic growth under nitrogen-limited conditions. We find that cells produce different amounts of H2 and show different growth rates, depending on the organic substrate provided (lactate, succinate, gluc...
ORGANISM(S): Rhodobacter sphaeroides 
2011-08-21 | E-GEOD-29811 | biostudies-arrayexpress
TranscriptomicsA Saccharomyces cerevisiae strain with a minimal complement of glycolytic genes reveals strong redundancies in central metabolism
As a result of ancestral whole genome and small-scale duplication events, the genome of Saccharomyces cerevisiaeM-bM-^@M-^Ys, and of many eukaryotes, still contain a substantial fraction of duplicated genes. In all investigated organisms, metabolic pathways, and more particularly glycolysis, are spe...
ORGANISM(S): Saccharomyces cerevisiae 
2014-12-06 | E-GEOD-63884 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of prop-1 and Ghrhr mutations in gene expression during normal aging in mice (Ames dwarf and Little mice)
Effects of the prop-1 and Ghrhr mutations in gene expression during normal aging in mice.
ORGANISM(S): Mus musculus 
2004-10-15 | E-MEXP-153 | biostudies-arrayexpress
TranscriptomicsExpression data from E. coli cells overexpressing either GreA or GreB in ppGpp0 cells in the dksA+ or dksA- background
Strains devoid of ppGpp (ΔrelA ΔspoT; called ppGpp0), and ppGpp0 dksA- exhibit several amino acid requirements for growth on minimal media. We found that overexpression of DksA can complement some of those requirements. Since DksA is a factor that binds to the RNA polymerase secondary channel, we wo...
ORGANISM(S): Escherichia coli 
2011-10-26 | E-GEOD-28795 | biostudies-arrayexpress
TranscriptomicsBinding data for nine transcription factors for S. cerevisiae salt response
Complex biological processes are often regulated, at least in part, by the binding of transcription factors to their targets. Recently, considerable effort has been made to analyze the binding of relevant factors to the suite of targets they regulate, thereby generating a regulatory circuit map. H...
ORGANISM(S): Saccharomyces cerevisiae 
2010-06-20 | E-GEOD-15639 | biostudies-arrayexpress
TranscriptomicsEvolution of E. coli transcriptome under osmotic-stress with and without RpoS
The RpoS sigma factor protein of Escherichia coli is the master transcriptional regulator of physiological responses to a variety of stresses. This stress response comes at the expense of scavenging for scarce resources, causing a trade-off between stress tolerance and nutrient acquisition. This t...
ORGANISM(S): Escherichia coli 
2009-11-09 | E-GEOD-13666 | biostudies-arrayexpress
UnknownDifferences in Prevalence and Incidence of Electrocardiogram Abnormalities and Cardiovascular Autonomic Neuropathy Among Randomized Glucose-Lowering Treatments in Early Type 2 Diabetes: The Glycemia Reduction Approaches in Diabetes (GRADE) Cohort.
Not available
S-EPMC12583396 | biostudies-literature
UnknownPrecision Medicine in Nephrology: An Integrative Framework of Multidimensional Data in the Kidney Precision Medicine Project.
Not available
S-EPMC10922684 | biostudies-literature
UnknownDifferentiation of Prior SARS-CoV-2 Infection and Postacute Sequelae by Standard Clinical Laboratory Measurements in the RECOVER Cohort.
Not available
S-EPMC11408082 | biostudies-literature
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