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TranscriptomicsTranscription profiling of tomato shoots and roots from plants systemically infected by TSWV reveals organ-specific transcriptional responses
Transcription profiling of roots and shoots of tomato plants as a result of systemic infection with the tospovirus Tomato Spotted Wilt Virus (TSWV).
ORGANISM(S): Solanum lycopersicum 
2009-08-04 | E-MTAB-133 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of roots and leaves of tomato plants colonized by the arbuscular mycorrhizal fungus Glomus mosseae
Transcriptional changes triggered in roots and shoots of tomato (Solanum lycopersicum) as a result of the colonization by the AM fungus Glomus mosseae.
ORGANISM(S): Solanum lycopersicum 
2009-08-01 | E-MTAB-117 | biostudies-arrayexpress
TranscriptomicsTranscriptomic analysis of tomato plants infected by the geminivirus TYLCSV
Gene expression of tomato plants infected by Tomato yellow leaf curl Sardinia virus (TYLCSV) and mock inoculated were compared.
ORGANISM(S): Lycopersicon esculentum 
2014-02-01 | E-MEXP-3953 | biostudies-arrayexpress
TranscriptomicsFrom root to fruit: RNA-Seq analysis reveals that arbuscular mycorrhizal symbiosis may affect the tomato fruit metabolism
The crop species Solanum lycopersicum establishes a beneficial root- symbiosis with the widespread group of arbuscular mycorrhizal (AM) fungi. The mycorrhiza establishment leads to a modulation of the plant gene expression which is not restricted to the root compartment but spreads at the organism-w...
ORGANISM(S): Solanum lycopersicum L. 
2014-04-04 | E-MTAB-2276 | biostudies-arrayexpress
TranscriptomicsHigh-throughput sequencing of small RNAs in Vitis vinifera
Vitis vinifera endogenous small RNAs Size fractionated small RNA from total RNA extracts of Vitis vinifera leaves, inflorescences, tendrils and small berries were ligated to adapters, purified again and reverse transcribed. After PCR amplification the sample was subjected to Solexa/Illumina high thr...
ORGANISM(S): Vitis vinifera 
2010-04-29 | E-GEOD-18405 | biostudies-arrayexpress
TranscriptomicsmicroRNA-target RNA pairs revealed by Parallel analysis of RNA ends in Vitis vinifera
Vitis vinifera RNA degradome Isolated polyadenylated RNA from total RNA extracts of Vitis vinifera leaves, were ligated to 5'-adapter that include san MmeI recognition site. The ligated products were purified again, reverse transcribed and cleaved with MmeI. The 5' fragments were purified from gel ...
ORGANISM(S): Vitis vinifera 
2010-04-29 | E-GEOD-18406 | biostudies-arrayexpress
TranscriptomicsArbuscular mycorrhizal symbiosis limits foliar transcriptional responses to viral infection and favors long-term virus accumulation
Transcriptional changes triggered by the systemic infection of the tospovirus Tomato Spotted Wilt Virus (TSWV) in roots and shoots of tomato plants (Solanum lycopersicum) mycorrhized by Glomus mosseae
ORGANISM(S): Solanum lycopersicum 
2011-10-31 | E-MTAB-620 | biostudies-arrayexpress
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