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167483
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Unknown
(110490)
Proteomics
(25969)
Transcriptomics
(16479)
Genomics
(10722)
Metabolomics
(3486)
Other
(100)
Clinical
(58)
Models
(44)
Genomic
(34)
Methylation profiling
(32)
Multiomics
(9)
Organisms
Homo sapiens
(6844)
Mus musculus
(3739)
Arabidopsis thaliana
(1209)
Saccharomyces cerevisiae
(656)
Caenorhabditis elegans
(654)
Rattus norvegicus
(533)
Drosophila melanogaster
(524)
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(210)
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(172)
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(169)
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(141)
Candida albicans
(103)
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(95)
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(90)
Sus scrofa
(87)
Escherichia coli str. K-12 substr. MG1655
(79)
Thermus thermophilus HB8
(78)
Mycobacterium tuberculosis
(75)
Streptococcus pneumoniae D39
(70)
Pseudomonas aeruginosa
(70)
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(70)
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(62)
Staphylococcus aureus
(59)
Escherichia coli K-12
(59)
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(20)
Oryctolagus cuniculus
(15)
cellular organisms
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Cavia porcellus
(2)
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(1)
Arabidopsis
(1)
Organisms
Homo sapiens
(1976)
Mus musculus
(971)
Aspergillus niger
(420)
Arabidopsis thaliana
(290)
Rattus norvegicus
(161)
Saccharomyces cerevisiae
(149)
Pseudomonas simiae
(128)
Aspergillus nidulans
(83)
Dichomitus squalens
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Oryza sativa
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Escherichia coli
(68)
Danio rerio
(67)
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(67)
Thermus thermophilus HB8
(56)
Zea mays
(51)
Salicornia virginica
(49)
Aspergillus nidulans FGSC A4
(45)
Penicillium subrubescens
(45)
soil metagenome
(39)
Caenorhabditis elegans
(35)
Solanum lycopersicum
(34)
Phanerodontia chrysosporium
(32)
Broussonetia papyrifera
(30)
Drosophila melanogaster
(30)
Sus scrofa
(29)
Trichoderma reesei QM6a
(28)
Neurospora crassa OR74A
(25)
Schizosaccharomyces pombe
(24)
algae metagenome
(24)
microbial mat metagenome
(23)
Repository
pride
(25046)
biostudies-arrayexpress
(16801)
ENA
(8173)
MetaboLights
(3150)
geo
(2100)
MassIVE
(452)
EGA
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jPOST
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iProX
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PeptideAtlas
(80)
NODE
(61)
BioModels
(34)
dbGaP
(34)
PanoramaPublic
(16)
GPMDB
(15)
MetabolomicsWorkbench
(15)
PAXDB
(13)
FAIRDOMHub
(8)
ExpressionAtlas
(5)
EVA
(4)
Cell Collective
(2)
Tissue
Ear flower meristem
(1)
Ear primordia 2 mm
(1)
Tassel primordia 1 to 2 mm
(1)
Tassel primordia 3 to 4 mm
(1)
Tassel primordia 5 to 7 mm
(1)
Ear primordia 1 mm
(1)
Ear spikelet meristem
(1)
Ear spikelet pair meristem
(1)
Internode 6-7
(1)
Embryo 20 days after pollination
(1)
Symmetrical division zone of leaf 8
(1)
Internode 7-8
(1)
Root differentiation zone
(1)
Mature leaf 8
(1)
Growth zone of leaf 8
(1)
2-4 mm from tip of ear primordium
(1)
Secondary root
(1)
Root elongation zone
(1)
Embryo 38 days after pollination
(1)
Pericarp and aleurone
(1)
Germinated embryo 2 days after imbibition
(1)
6-8 mm from tip of ear primordium
(1)
Mature female spikelet
(1)
Endosperm 12 days after pollination
(1)
Unpollinated silk
(1)
Endosperm crown
(1)
Stomatal division zone of leaf 8
(1)
Mature pollen
(1)
Root cortex
(1)
Caryopsis (5 dpa)
(1)
Disease
Breast cancer
(538)
Melanoma
(118)
Normal
(80)
Multiple myeloma
(66)
Neuroblastoma
(63)
Hepatocellular carcinoma
(55)
Osteosarcoma
(45)
Adenocarcinoma
(9)
Prostate cancer
(7)
Rheumatoid arthritis
(5)
Reference
(5)
Colorectal cancer
(5)
Diabetes mellitus
(4)
Primary tumor
(4)
Chronic lymphocytic leukemia
(4)
Acute myeloid leukemia
(4)
Breast adenocarcinoma
(3)
Osteosarcoma
(3)
Colon carcinoma
(3)
Chronic myeloid leukemia
(3)
Cancer
(3)
Mammary tumor
(3)
Gastric cancer
(3)
Colorectal adenocarcinoma
(3)
Carcinoma
(3)
Breast carcinoma
(3)
Cholesterol ester storage disease
(1)
Hyperparathyroidism
(1)
Hypoparathyroidism
(1)
Amyloidosis
(1)
Technology Type
Mass Spectrometry
(25060)
Mass spectrometry
(2012)
Mass spectrometry assay
(941)
NMR spectroscopy
(190)
NMR spectroscopy assay
(31)
ESI
(11)
Illumina 15K
(8)
Illumina HiSeq 2000
(7)
Illumina HiSeq 2500
(3)
Illumina HiSeq 2000, ILLUMINA
(3)
EI
(3)
ILLUMINA, Illumina HiSeq 2000
(2)
Illumina HiSeq 2500, ILLUMINA, Affymetrix GeneChip Scanner 3000 7g
(1)
NextSeq 500, Illumina HiSeq 4000, ILLUMINA
(1)
Illumina 450K array, ILLUMINA, Illumina HiSeq 2000, NextSeq 500
(1)
Illumina HiSeq 3000, ILLUMINA
(1)
Illumina HiSeq 4000, ILLUMINA
(1)
Illumina HiSeq 2500, ILLUMINA
(1)
Illumina 450K, Bisulfite-Seq
(1)
HiSeq X Ten, ILLUMINA
(1)
Illumina HumanExome-12v1_A
(1)
Illumina (various), Illumina (Various)
(1)
Illumina HiSeq 2500 (ILLUMINA), AB SOLiD System (ABI_SOLID)
(1)
Illumina
(1)
Illumina Genome Analyzer II, Illumina HiSeq 2000, Affymetrix_SNP6
(1)
Illumina_670k - Illuminus, Affymetrix 6.0, Illumina 1.2M
(1)
Unknown
(1)
Illumina MiSeq
(1)
Illumina Genome Analyzer II
(1)
NMR
(1)
Instrument Platform
Illumina NovaSeq 6000
(468)
NextSeq 500
(412)
Illumina HiSeq 2000
(293)
Illumina HiSeq 2500
(266)
Illumina HiSeq 4000
(185)
NextSeq 550
(129)
Illumina MiSeq
(100)
Illumina HiSeq 1500
(57)
NextSeq 2000
(51)
Scanning hardware
(39)
Illumina Genome Analyzer IIx
(38)
Illumina NovaSeq X
(38)
Illumina Genome Analyzer II
(36)
Axon GenePix 4000B scanning hardware
(34)
Illumina HiSeq 3000
(34)
GenePix 4000B [Axon Instruments]
(29)
GenePix 4000A [Axon Instruments]
(22)
Axon- GenePix4000B
(22)
Axon GenePix 4000A scanning hardware
(21)
Illumina HiSeq 1000
(19)
NA
(17)
418 [Affymetrix]
(15)
G2565BA DNA microarray scanner [Agilent]
(14)
Ion Torrent Proton
(14)
DNBSEQ-G400
(13)
BGISEQ-500
(13)
HiSeq X Ten
(12)
Element AVITI
(11)
ScanArray [PerkinElmer]
(11)
Other
(11)
Publication Date
2025
(5491)
2024
(4022)
2022
(3918)
2023
(3775)
2026
(3528)
2021
(3283)
2020
(2467)
2013
(2359)
2010
(2119)
2015
(2107)
2014
(2088)
2019
(2037)
2018
(1783)
2012
(1762)
2016
(1743)
2011
(1554)
2017
(1194)
2008
(916)
2009
(770)
2007
(513)
2005
(314)
2006
(287)
2004
(132)
2003
(32)
2027
(6)
2002
(3)
UNIPROT ID/AC
P10515
(2)
P01275
(2)
Q96G03
(2)
P54840
(2)
Q16822
(2)
Q15181
(2)
P17858
(2)
P35557
(2)
O75390
(2)
P11168
(2)
P16118
(2)
P05062
(2)
P00338
(2)
P07195
(2)
O00330
(2)
P09622
(2)
P07864
(2)
P04406
(2)
P01308
(2)
Q9LKL2
(2)
P30613
(2)
P36871
(2)
P06744
(2)
P06733
(2)
P09104
(2)
P13929
(2)
O00757
(2)
P09467
(2)
P35575
(2)
P35558
(2)
ENSEMBL ID
ENSG00000170477
(70)
ENSG00000229353
(45)
ENSG00000147251
(25)
ENSG00000247315
(13)
ENSG00000176092
(3)
ENSG00000204131
(3)
CHEBI ID
CHEBI:32816
(384)
CHEBI:16027
(350)
CHEBI:17754
(292)
CHEBI:16761
(214)
CHEBI:15422
(173)
CHEBI:44897
(171)
CHEBI:15846
(150)
CHEBI:422
(140)
CHEBI:28087
(7)
CHEBI:29052
(6)
CHEBI:17835
(6)
CHEBI:17794
(6)
CHEBI:16001
(6)
CHEBI:16908
(6)
CHEBI:16526
(6)
CHEBI:16108
(6)
CHEBI:4167
(5)
CHEBI:15996
(5)
CHEBI:17552
(5)
CHEBI:28602
(5)
CHEBI:16236
(5)
CHEBI:16905
(5)
CHEBI:18021
(5)
CHEBI:30031
(4)
CHEBI:15343
(4)
CHEBI:15361
(4)
CHEBI:17665
(4)
CHEBI:15946
(4)
CHEBI:18357
(3)
CHEBI:4170
(3)
Metabolite Name
Hypoxanthine
(523)
Creatine
(492)
Adenosine
(467)
Taurine
(466)
Adenine
(465)
Uridine
(456)
Inosine
(444)
Uracil
(443)
Creatinine
(435)
Choline
(414)
L-Phenylalanine
(411)
L-Tyrosine
(406)
Guanosine
(403)
Xanthine
(391)
Betaine
(378)
L-Histidine
(357)
L-Tryptophan
(357)
Guanine
(356)
Cytidine
(349)
Citric acid
(338)
Cytosine
(334)
L-Proline
(332)
L-Glutamine
(317)
L-Valine
(315)
Glycine
(309)
Riboflavin
(307)
L-Threonine
(303)
Azelaic acid
(302)
Ornithine
(301)
Pantothenic acid
(300)
First Public Date
2014
(1418)
2025
(1117)
2024
(781)
2026
(729)
2021
(672)
2019
(631)
2023
(588)
2022
(497)
2020
(452)
2018
(408)
2017
(351)
2015
(220)
2016
(172)
2013
(135)
2012
(1)
2011
(1)
Modelling Approach
Ordinary differential equation model
(25)
Constraint-based model
(3)
Other
(2)
Mathematical model
(1)
Steady-state model
(1)
Study status
Completed
(26)
Recruiting
(11)
Not yet recruiting
(10)
Active, not recruiting
(6)
Not provided
(3)
Terminated
(1)
Withdrawn
(1)
Lab affiliation
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA
(105)
EDyP
(84)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry
(78)
Proteomics Core Facility and Research Group Proteomics, CEITEC-MU, Masaryk University, Brno, Czech Republic
(66)
Head of the Curie Institute Mass Spectrometry Platform
(64)
Wageningen University
(52)
The University of Melbourne
(48)
University of Victoria
(44)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands
(42)
Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720
(39)
University of Edinburgh
(35)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark
(34)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany
(33)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States
(33)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany
(32)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany
(30)
University Hospital Cologne
(29)
Cellzome
(28)
Chair of Biochemistry II, Theodor Boveri-Institute, Biocenter, University of Würzburg, Würzburg, Germany
(28)
Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne 3000, Australia
(28)
University of Oxford
(28)
Functional Proteomics, ICR
(26)
North Carolina State University
(25)
OncoProteomics Laboratory, Dept of Medical Oncology, VU University Medical Center, Amsterdam, The Netherlands
(25)
The Institute of Cancer Research
(25)
Utrecht University
(25)
UCSF
(24)
Laboratoire de Spectrométrie de Masse BioOrganique, Analytical Science department, IPHC, CNRS, Strasbourg University, UMR7178, Strasbourg, France
(23)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom
(22)
Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany
(22)
Tags
pathogen
(1020)
pathogen:fungus
(605)
pathogen:bacterium
(387)
xref:PubMed:21054499
(39)
pathogen:protozoan
(19)
xref:PubMed:22832344
(10)
xref:PubMed:18523433
(10)
xref:PubMed:15656970
(8)
xref:PubMed:24089473
(8)
xref:PubMed:25475144
(7)
xref:PubMed:40920573
(7)
xref:PubMed:41248492
(7)
pathogen:virus
(7)
xref:PubMed:31698453
(6)
xref:PubMed:17327492
(6)
xref:PubMed:30744511
(6)
xref:PubMed:16328372
(5)
xref:PubMed:38316746
(5)
xref:PubMed:41261861
(5)
xref:PubMed:22753056
(5)
xref:PubMed:16582906
(5)
xref:PubMed:31419979
(5)
xref:PubMed:18436742
(5)
xref:PubMed:39499634
(4)
xref:PubMed:39273240
(4)
xref:PubMed:21742914
(4)
xref:PubMed:39232158
(4)
xref:PubMed:37729611
(4)
xref:PubMed:28164410
(4)
xref:PubMed:26637548
(4)
Keyword
Colonoscopy
(5)
EGFR
(4)
Phase I
(3)
Oncology
(3)
Irinotecan
(3)
MM-398
(2)
Polypectomy
(2)
ErbB3
(2)
Adenoma detection rate
(2)
Metastatic Colorectal Cancer
(2)
Colorectal
(2)
Trametinib
(2)
Leucovorin
(2)
Ct colonography
(1)
Advanced endoscopic imaging
(1)
Spigelman
(1)
Blue light imaging
(1)
Linked color imaging
(1)
Optical histology
(1)
Variable stiffness
(1)
Deep learning
(1)
MDCT
(1)
Diffusion
(1)
Weighted
(1)
3T
(1)
Water Immersion
(1)
Water Exchange
(1)
On-demand sedation
(1)
Mean adenomas per procedure
(1)
Tafinlar
(1)
IsPrivate
False
(34)
Model Flag
Non Kinetic
(2)
Non Miriam
(1)
Submitter Keywords
FROG
(2)
FAIR-AIML
(1)
Machine Learning Model
(1)
Not Peer Reviewed
(1)
Classification
fungi
(605)
bacteria
(387)
protozoa
(19)
viruses
(7)
helminths
(2)
Modification
4x(15)N labeled L-arginine
(54)
2x(15)N labeled L-lysine
(53)
4-tetrahydrothiazine-3-carboxylic acid
(35)
15.994915
(33)
57.021464
(33)
Not available
(29)
N6
(24)
N6-dimethyl-L-lysine
(23)
42.010565
(21)
-17.026549
(20)
-18.010565
(9)
79.966331
(9)
4x(2)H labeled dimethylated residue
(8)
4
(7)
+3amu)
(6)
15.99491
(6)
57.02146
(6)
0.984016
(5)
58.005479
(4)
0.984
(3)
3x(2)H labeled N6-acetyl-L-lysine
(3)
45.029395
(3)
27.994915
(2)
28.0313
(2)
4'-dihydroxyphenylalanine
(2)
4x(2)H labeled dimethylated L-lysine
(2)
56.026215
(2)
71.037114
(2)
10.008269
(1)
14.01565
(1)
Study type
Transcription profiling by array
(9478)
RNA-seq of coding RNA
(1850)
ChIP-seq
(1629)
ChIP-chip by tiling array
(514)
Comparative genomic hybridization by array
(369)
Other
(329)
ChIP-chip by array
(245)
Unknown experiment type
(223)
RNA-seq of coding RNA from single cells
(219)
Methylation profiling by array
(209)
RNA-seq of non coding RNA
(207)
Methylation profiling by high throughput sequencing
(203)
Transcription profiling by tiling array
(181)
DNA-seq
(117)
MicroRNA profiling by array
(105)
RNA-seq of total RNA
(103)
Cell line - High-throughput sequencing
(66)
ATAC-seq
(50)
Genotyping by array
(47)
High-throughput sequencing
(44)
Proteomic profiling by array
(43)
Animal - High-throughput sequencing
(41)
RIP-seq
(35)
RNAi profiling by array
(31)
CUT&RUN
(30)
Transcription profiling by RT-PCR
(29)
Single nucleus RNA sequencing
(27)
Human - High-throughput sequencing
(25)
Transcription profiling by SAGE
(19)
Hi-C
(19)
Release Date
2022
(13646)
2023
(12419)
2025
(12281)
2021
(11862)
2024
(10509)
2020
(9279)
2019
(7130)
2018
(6312)
2016
(5441)
2015
(5350)
2017
(5146)
2014
(4939)
2013
(4519)
2012
(3536)
2010
(3371)
2011
(3079)
2026
(1976)
2009
(1719)
2008
(1688)
2007
(887)
2006
(629)
2005
(526)
2004
(303)
2003
(194)
2002
(130)
2001
(115)
2000
(112)
1999
(92)
1998
(69)
1997
(15)
Location
Japan
(10)
United States
(9)
Canada
(8)
Netherlands
(6)
Italy
(5)
Spain
(5)
France
(5)
India
(4)
Denmark
(4)
Germany
(3)
South Korea
(2)
Iran
(1)
Norway
(1)
North Korea
(1)
Asia except Japan
(1)
Europe
(1)
Portugal
(1)
North America
(1)
Turkey
(1)
Sweden
(1)
China
(1)
Czechia
(1)
Belgium
(1)
Hungary
(1)
Australia
(1)
United Kingdom
(1)
Austria
(1)
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Emticicia sp. MM strain:MM
Emticicia sp. MM strain:MM Genome sequencing and assembly
PRJNA316534
|
ENA
Cite
Cellulosimicrobium sp. MM strain:MM
Cellulosimicrobium sp. MM strain:MM Genome sequencing and assembly
PRJNA255748
|
ENA
Cite
Metabolome of three Vancomycin-intermediate Staphylococcus aureus (VISA) mutants compared with the parent strain MM66
Not available
ORGANISM(S):
Staphylococcus aureus
ST000309
|
MetabolomicsWorkbench
Cite
Glutamine flux in macrophages treated with stable-isotope labeled analog 4 mM (U-13C5) glutamine
Not available
ORGANISM(S):
Mus musculus
ST002061
|
MetabolomicsWorkbench
Cite
Untargeted Metabolomics analysis of A549 treated with 0.5 mM extracellular ATP and 10 ng/ml TGF-beta
Not available
ORGANISM(S):
Homo sapiens
ST001779
|
MetabolomicsWorkbench
Cite
Amanita crenulata MM 9.01.06
Amanita crenulata MM 9.01.06 gene expression profiling - Amacr_pool transcriptome
PRJNA584773
|
ENA
Cite
Amanita crenulata MM 9.01.06
Amanita crenulata MM 9.01.06 gene expression profiling - Amacr_basal 8 transcriptome
PRJNA584769
|
ENA
Cite
Amanita crenulata MM 9.01.06
Amanita crenulata MM 9.01.06 gene expression profiling - Amacr_basal 9 transcriptome
PRJNA584770
|
ENA
Cite
Amanita crenulata MM 9.01.06
Amanita crenulata MM 9.01.06 gene expression profiling - Amacr_litter 8 transcriptome
PRJNA584771
|
ENA
Cite
Amanita crenulata MM 9.01.06
Amanita crenulata MM 9.01.06 gene expression profiling - Amacr_litter 9 transcriptome
PRJNA584772
|
ENA
Cite
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