Mohan A A - OmicsDI

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Unknown (2711)
Transcriptomics (66)
Proteomics (45)
Genomics (30)
Metabolomics (2)
Models (1)
Genomic (1)

Organisms

Homo sapiens (51)
Mus musculus (15)
Rattus norvegicus (9)
Caenorhabditis elegans (6)
Arabidopsis thaliana (5)
Macaca mulatta (4)
Drosophila melanogaster (3)
Solanum tuberosum (2)
Saccharomyces cerevisiae (2)
Macaca nemestrina (1)
Gossypium hirsutum (1)
Staphylococcus epidermidis (1)
Zea mays (1)
Bos taurus (1)
Candida albicans (1)
Bacillus pumilus SAFR-032 (1)
Bacteria (1)
Conus caracteristicus (1)
Conus zonatus (1)
Crocus sativus (1)
Escherichia coli str. K-12 substr. W3110 (1)
Knufia petricola (1)
Leishmania donovani BPK282A1 (1)
Pseudomonas fluorescens (1)
Staphylococcus aureus (1)
Triticum aestivum (1)

Organisms

Mus musculus (3)
Homo sapiens (2)

Repository

biostudies-arrayexpress (70)
pride (32)
ENA (21)
MassIVE (7)
EGA (5)
PeptideAtlas (3)
MetaboLights (2)
BioModels (1)
dbGaP (1)
geo (1)
iProX (1)
PAXDB (1)

Tissue

Cell culture (8)
Embryonic stem cell (4)
Hepatocyte (3)
Oral epithelium (2)
Blood serum (1)
Breast (1)
Cell suspension culture (1)
Epithelial cell (1)
Eukaryotic cell (1)
Ewing's sarcoma cell (1)
Flower (1)
Immortal cell line cell (1)
Leaf (1)
Liver (1)
Melanocyte (1)
Placenta (1)
Prokaryotic cell (1)
Squamous epithelial cell (1)
Vegetative cell (1)
Venom gland (1)

Disease

Hepatocellular carcinoma (2)
Control (1)
Breast cancer (1)
Head and neck squamous cell carcinoma (1)
Leishmaniasis (1)
Lupus nephritis (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (32)
Shotgun proteomics (22)
Affinity purification coupled with mass spectrometry proteomics (3)
Bottom-up proteomics (3)
Mass spectrometry (2)
Top-down proteomics (2)
Illumina MiSeq (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)

Instrument Platform

LTQ Orbitrap Velos (5)
LTQ (3)
LTQ Orbitrap (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Illumina HiSeq 4000 (1)
LTQ Orbitrap Elite (1)
Orbitrap Exploris 480 (1)
Liquid Chromatography MS - alternating - hilic (1)

Publication Date

2012 (15)
2014 (13)
2015 (9)
2011 (9)
2010 (9)
2021 (8)
2020 (7)
2013 (5)
2025 (5)
2016 (4)
2006 (4)
2023 (4)
2026 (4)
2019 (4)
2017 (3)
2024 (3)
2022 (3)
2009 (2)
2008 (2)
2018 (2)
2005 (1)

UNIPROT ID/AC

3MG2_ECOLI (1)
3PASE_ECOLI (1)
5FCL_ECOLI (1)
6PGD_ECOLI (1)
A2MG_ECOLI (1)
AAT_ECOLI (1)
ABGB_ECOLI (1)
ACDH_ECOLI (1)
ACKA_ECOLI (1)
ACNB_ECOLI (1)
ACPS_ECOLI (1)
ACYP_ECOLI (1)
ADIA_ECOLI (1)
AG43_ECOLI (1)
AIDB_ECOLI (1)
AK2H_ECOLI (1)
ALAA_ECOLI (1)
ALDA_ECOLI (1)
ALDB_ECOLI (1)
ALF1_ECOLI (1)
ALF_ECOLI (1)
ALLC_ECOLI (1)
ALR1_ECOLI (1)
ALR2_ECOLI (1)
ALSA_ECOLI (1)
ALSK_ECOLI (1)
AMIB_ECOLI (1)
AMPN_ECOLI (1)
AMPP_ECOLI (1)
APAG_ECOLI (1)

CHEBI ID

CHEBI:14314 (2)
CHEBI:15354 (2)
CHEBI:15652 (2)
CHEBI:15682 (2)
CHEBI:15698 (2)
CHEBI:15721 (2)
CHEBI:15727 (2)
CHEBI:15741 (2)
CHEBI:15891 (2)
CHEBI:15940 (2)
CHEBI:16027 (2)
CHEBI:16040 (2)
CHEBI:16235 (2)
CHEBI:16668 (2)
CHEBI:16680 (2)
CHEBI:16708 (2)
CHEBI:16737 (2)
CHEBI:16742 (2)
CHEBI:16870 (2)
CHEBI:17050 (2)
CHEBI:17126 (2)
CHEBI:17154 (2)
CHEBI:17202 (2)
CHEBI:17239 (2)
CHEBI:17345 (2)
CHEBI:17361 (2)
CHEBI:17363 (2)
CHEBI:17509 (2)
CHEBI:17533 (2)
CHEBI:17552 (2)

Metabolite Name

(+)-2,7-Dideoxypancratistatin (1)
(+)-Alantolactone (1)
(+)-Procyanidin B2 (1)
(+)-Riboflavin (1)
(+)-abscisic acid beta-D-glucopyranosyl ester (1)
(+)-syringaresinol (1)
(+/-)-Camphoric acid (1)
(-)-2,3-Dehydroemetine (1)
(-)-Abscisic acid (1)
(-)-Caryophyllene oxide (1)
(-)-Febrifugine (1)
(-)-Lupinine (1)
(-)-Rhododendrin (1)
(-)-Santiaguine (1)
(-)-Vindoline (1)
(10E,12Z)-9-Hydroperoxy-10,12-octadecadienoic acid (1)
(10Z)-heptadecenoic acid (1)
(12-Methyl-7-tetraphenyl)methyl hydrogen sulfate (1)
(17beta)-4,4-Difluoro-17-hydroxy-17-methylandrost-5-en-3-one (1)
(1E)-1-(Propylsulfanyl)-1-propene (1)
(1E)-1-{[1-(Methyldisulfanyl)propyl]sulfinyl}-1-propene (1)
(1S)-1-Carboxy-2-(1H-imidazol-4-yl)-N,N,N-trimethylethanaminium (1)
(1S,2R,5S)-2-Isopropyl-5-methylcyclohexyl 3-oxobutanoate (1)
(1S,4S)-menthone-8-thioacetate (1)
(1S,4aS)-1,4a-Dimethyl-1,2,3,4,4a,5,6,8a-octahydronaphthalene (1)
(1S,6S)-6-Aminooctahydro-1-indolizinyl acetate (1)
(2,7-Dimethyloctahydro-1H-cyclopenta[c]pyridin-4-yl)methanol (1)
(2-Amino-2-carboxyethyl)selanyl (1)
(2-Chlorophenyl)diphenylmethanol (1)
(2-Hydroxy-2-oxido-1,3,2-dioxaphospholan-4-yl)methyl palmitate (1)

IsPrivate

False (1)

First Public Date

2024 (14)
2014 (3)
2025 (1)
2023 (1)
2020 (1)
2017 (1)

Modelling Approach

Delayed differential equation model (1)

Study type

Transcription profiling by array (45)
Methylation profiling by array (5)
Comparative genomic hybridization by array (4)
Transcription profiling by RT-PCR (3)
Unknown experiment type (2)
Human - One-color microarray (2)
ChIP-seq (2)
Methylation profiling by high throughput sequencing (2)
RNA-seq of coding RNA (2)
Other (1)
Proteomic profiling by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2022 (359)
2021 (330)
2024 (295)
2025 (280)
2023 (277)
2020 (226)
2019 (181)
2018 (135)
2016 (121)
2017 (113)
2015 (89)
2014 (79)
2012 (60)
2013 (55)
2026 (44)
2011 (41)
2010 (30)
2009 (22)
2008 (12)
2006 (10)
2007 (10)
2003 (4)
2005 (3)
2002 (2)
2000 (1)
1999 (1)

Lab affiliation

Associate Professor Department of Biochemistry Room 220, Research and Innovation Centre, University of Regina, Regina, Saskatchewan S4S 0A2 (4)
Department of Biochemistry, University of Regina, Regina, Saskatchewan S4S 0A2, Canada. (2)
Institute of Bioinformatics 7th floor, Discoverer building, International Tech Park, Bangalore 560 066 (2)
Assistant Professor (PI,ANRF-SERB project), Department of Botany, Ravenshaw University, Cuttack, Odisha- 753003 India (1)
Associate professor Department of Biotechnology National Institute of Pharmaceutical Education and Research, Hajipur, Bihar-844102 (1)
Beckman Research Institute of the City of Hope (1)
Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York (1)
Cancer proteomics lab Department of Molecular Cell Biology Weizmann Institute of Science (1)
DKFZ F130 Division of Immunotherapy and Immunoprevention (1)
Department of Biotechnology, University of Natural Resources and Life Sciences, BOKU, Vienna, Austria (1)
Department of Chemistry, Indian Institute of Science Education and Research Bhopal (IISERB, India (1)
Department of Human Genetics and Biochemistry Sackler School of Medicine Tel Aviv University Tel-Aviv, Israel 69978 (1)
Department of Human Molecular Genetics and Biochemistry, Sackler School of Medicine, Tel Aviv University, Tel-Aviv 6997801, Israel (1)
Department of Microbiology and Immunology, Michigan Medicine, University of Michigan, Ann Arbor, MI 48109, USA (1)
Department of Neurology, University of Michigan Medical School, Ann Arbor, MI 48109, United States (1)
Department of Physiology, Institute of Neuroscience and Physiology, University of Gothenburg, Sweden (1)
Donnelly CCBR, University of Toronto, Toronto ON M5S 3E1, Canada (1)
Institute of Bioinformatics, 7th floor, Discoverer building, International Tech Park, Bangalore 560 066 (1)
Institute of Bioinformatics, Bangalore (1)
Molecular Biophysics Unit, Indian Institute of Science, Bangalore. (1)
Proteomics Core Facility University of Gothenburg (1)
QIMR Berghofer Medical Research Institute (1)
Research and Innovation Centre, University of Regina, SK S4S OA2, Canada (1)
Shanghai Diabetes Institute, Shanghai Sixth People's Hospital Affiliated to Shanghai Jiao Tong University School of Medicine (1)
Student of NWAFU (1)
The New Zealand Institute of Plant and Food Research, Auckland, New Zealand (1)
Tianfu Wu/Lab Dept. of Biomedical Engineering University of Houston (1)

Tags

xref:PubMed:25636161 (1)
xref:PubMed:32944600 (1)
xref:EuropePMC:PMC7481814 (1)
xref:PubMed:22561152 (1)

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Proteome analysis of Fielder and TaXB24 overexpression plant

To elucidate the molecular mechanism by which the expression of defense-related genes was repressed in TaXB24 overexpression wheat plants, 4D label-free quantitative nuclear proteomics analysis of Fielder and TaXB24-OE12 plant leaves were performed.

ORGANISM(S): Triticum aestivum (Wheat)

2026-10-21 | PXD040178 | Pride

Taxb24

A-Z of Epigenetic Readers: Targeting Alternative Splicing and Histone Modification Variants in Cancer.

Not available

S-EPMC10968829 | biostudies-literature

Transcription profiling of Arabidopsis leaf tissues and protoplasts in response to Plum pox virus infection

Virus infection induces activation and suppression of global gene expression in the host. Profiling gene expression changes in the host may provide insights into the molecular mechanisms that underlie host physiological and phenotypic responses to virus infection. In this study, the Arabidopsis Affy...

ORGANISM(S): Arabidopsis thaliana

2008-11-07 | E-GEOD-11217 | biostudies-arrayexpress

Transcription profiling by array of Arabidopsis seedlings mutant for essp3 and brm

Synthesis and accumulation of seed storage proteins (SSPs) is an important aspect of the seed maturation program. Genes encoding SSPs are specifically and highly expressed in the seed during maturation. However, the mechanisms that repress the expression of these genes in leaf tissue are not well un...

ORGANISM(S): Arabidopsis thaliana

2009-02-07 | E-GEOD-11505 | biostudies-arrayexpress

Virtual Screening of Chemical Compounds for Discovery of Complement C3 Ligands.

Not available

S-EPMC6130793 | biostudies-literature

Transcription profiling by array of Staphylococcus epidermidis with and without co-culture with Candida albicans

S. epidermidis cultures vs. cocultures of S. epidermidis and C. albicans (all cultures at 6 hrs of growth)

ORGANISM(S): Staphylococcus epidermidis

2011-01-01 | E-MTAB-426 | biostudies-arrayexpress

Transcriptional profiling of C. elegans DAF-19 uncovers a ciliary base-associated protein and a CDK/CCRK/LF2p-related kinase required for intraflagellar transport.

Cilia are ubiquitous cell surface projections that modulate various sensory- and motility based processes and are implicated in a growing number of multi-organ genetic disorders termed ciliopathies. As new components required for cilium biogenesis and function remain unidentified, we sought to furth...

ORGANISM(S): Caenorhabditis elegans

2011-07-25 | E-GEOD-25633 | biostudies-arrayexpress

Transcriptional survey of alveolar macrophages in a murine model of chronic granulomatous inflammation reveals common themes with human sarcoidosis.

Not available

S-EPMC5966779 | biostudies-literature

3D-Printed Collagen-Nanocellulose Hybrid Bioscaffolds with Tailored Properties for Tissue Engineering Applications.

Not available

S-EPMC10731651 | biostudies-literature

miRNA profiling of Macaca mulatta intact colon samples during acute SIV infection

This study describes differential miRNA expression in intact colon tissue during acute SIV infection of rhesus macaques. Nine miRNAs were found to be significantly affected by infection, with 5 down-regulated and 4 up-regulated miRNAs. The expression of one upregulated miRNA was further characterize...

ORGANISM(S): Macaca mulatta

2014-06-01 | E-GEOD-56624 | biostudies-arrayexpress

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2856 Results

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