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TranscriptomicsGene expression of Listeria monocytogenes-infected HepG2 hepatocellular carcinoma in the presense of IL-17Aand IL-22
IL-17A and IL-22 induced several inflammation-induced genes and anti-microbial molecules including Pla2g2a and Lcn2 on HepG2 cells when the cells were treated with the cytokines before Listeria monocytogenes infection. HepG2 cells were treated with 50 ng/ml IL-17A and 10 ng/ml IL-22 before L. monocy...
ORGANISM(S): Homo sapiens 
2015-12-17 | E-GEOD-71248 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Listeria monocytogenes after infection into murine macrophages
P388D1 murine macrophages were cultured in 85 mm tissue culture plates to about semi confluency. L. monocytogenes serotypes (1/2a EGD-e, 4a L99, 4b CLIP80459 and 4b F2365) were infected to the P388D1 cell monolayer at a MOI of 100 per eukaryotic cell. Infection was carried for 45 min and followed by...
ORGANISM(S): Listeria monocytogenes 
2010-11-25 | E-MEXP-1947 | biostudies-arrayexpress
ProteomicsMOI analysis of purslane responses to salinity stress - roots
This project constructed a multiomics (proteome, metabolome, and transcriptome) database on the response of purslane (Portulaca oleracea L.) plants to salt stress and subsequently started to employ Single-omics (SOA) and Multi-omics Integration (MOI) strategies to characterize the molecular basis of...
ORGANISM(S): Portulaca oleracea 
2023-06-01 | PXD041628 | Pride
Portulaca oleracea Mult omics integration Salt stress 
ProteomicsMOI analysis of purslane responses to salinity stress - leaf
This project constructed a multiomics (proteome, metabolome, and transcriptome) database on the response of purslane (Portulaca oleracea L.) plants to salt stress and subsequently started to employ Single-omics (SOA) and Multi-omics Integration (MOI) strategies to characterize the molecular basis of...
ORGANISM(S): Portulaca oleracea 
2023-06-01 | PXD041627 | Pride
Portulaca oleracea Salinity stress Mult omics integration 
TranscriptomicsExpression data from WEEV infected BE(2)-C/m cells
Analysis of transcription response of differentiated human BE(2)-C/m neuronal cells to infection with WEEV at 12 h and 24 h after infection. Two independent sets of BE(2)-C/m cells uninfected or infected with WEEV at an MOI=10 and harvested at 12 h or 24 h after infection. Total RNA was harvested a...
ORGANISM(S): Homo sapiens 
2013-11-23 | E-GEOD-52659 | biostudies-arrayexpress
TranscriptomicsLytic infection of Lactococcus lactis by bacteriophages Tuc2009 and c2 trigger alternative transcriptional host responses
This study analysed the temporal transcriptional response of L. lactis UC509.9 undergoing infection with either Tuc2009 or c2, representing phages of two different species (P335 and c2, respectively) of the family Siphoviridae. For the first time, to our knowledge, both DNA microarrays of the host a...
ORGANISM(S): Lactococcus lactis subsp. cremoris UC509.9 
2013-06-27 | E-GEOD-45655 | biostudies-arrayexpress
TranscriptomicsRNA-seq of isolated human foetal and hiPSC L/M-opsin cone photoreceptor populations labelled using the AAV2/9.pR2.1.GFP reporter
The loss of cone photoreceptor cells, which are critical for optimal daylight vision, have the great impact on vision during retinal degenerations. Retinal differentiation of human induced pluripotent stem cell (hiPSC) sources could provide a renewable source of cone photoreceptors towards developin...
ORGANISM(S): Homo sapiens 
2018-04-20 | E-MTAB-6057 | biostudies-arrayexpress
TranscriptomicsA defect in ATP-citrate lyase links acetyl-CoA production, virulence factor elaboration and virulence in Cryptococcus neoformans
The interaction of Cryptococcus neoformans with phagocytic cells of the innate immune system is a key step in disseminated disease leading to meningoencephalitis in immunocompromised individuals. Transcriptional profiling of cryptococcal cells harvested from cell culture medium or from macrophages ...
ORGANISM(S): Cryptococcus neoformans var. grubii H99 
2013-08-15 | E-GEOD-41066 | biostudies-arrayexpress
TranscriptomicsMurine primary dendritic cells: Control vs. Influenza-infected vs. polyI:C stimulated.
MIcroRNA expression profiling of primary murine splenic dendritic cells (Flt3L expanded) comparing untreated cells to cells infected with Influenza A or stimulated with polyI:C in vitro. Three-condition experiment, Influenza A/PR/8/34 virus MOI=10 vs polyI:C 30 ug/mL vs. mock treated; RNA collected ...
ORGANISM(S): Mus musculus 
2012-12-05 | E-GEOD-36316 | biostudies-arrayexpress
TranscriptomicsMycoplasma gallisepticum Lipid Associated Membrane Proteins Up-regulate Inflammatory Genes in Chicken Tracheal Epithelial Cells via TLR-2 Ligation Through an NF-M-NM-:B Dependent Pathway
To identify differential gene expression profiles of chicken tracheal epithelial cells (TECs) upon exposure to Mycoplasma gallisepticum virulent strain Rlow and avirulent strain Rhigh and corresponding lipid associated membrane proteins(LAMP) at 1.5 hours in vitro. Goal of this experiment was to ide...
ORGANISM(S): Gallus gallus 
2014-09-19 | E-GEOD-61520 | biostudies-arrayexpress
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