Molecular neuroscience

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Unknown (35099)
Genomics (567)
Proteomics (148)
Transcriptomics (108)
Metabolomics (11)
Genomic (5)
Models (4)
Other (3)
Methylation profiling (1)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (141)
Andropogon gerardi (141)
Bacteria (141)
Bartonella quintana JK 31 (141)
Canis lupus familiaris (141)
Cnidaria (141)
Ectopseudomonas oleovorans CECT 5344 (141)
Ensifer adhaerens (141)
Halictus scabiosae (141)
Human immunodeficiency virus 1 (141)
Mesocricetus auratus (141)
Miscanthus x giganteus (141)
Mus musculus (141)
Panicum virgatum (141)
Pseudomonas aeruginosa PA103 (141)
Pseudomonas aeruginosa SJTD-1 (141)
Rabies virus Nishigahara RCEH (141)
Rattus norvegicus (141)
Mus musculus (66)
Homo sapiens (32)
Rattus norvegicus (7)
Aplysia californica (4)
Zea mays (2)
Drosophila melanogaster (2)
Macaca mulatta (1)
Danio rerio (1)
Canis lupus familiaris (1)
Taeniopygia guttata (1)
Sus scrofa (1)
Caenorhabditis elegans (1)

Organisms

Mus musculus (288)
Homo sapiens (118)
Rattus norvegicus (31)
Drosophila melanogaster (26)
Danio rerio (11)
Macaca mulatta (7)
Sus scrofa (5)
Aplysia californica (3)
Leucoraja erinaceus (2)
Escherichia coli str. K-12 substr. MG1655 (2)
Ictidomys tridecemlineatus (2)
Taeniopygia guttata (2)
Bos taurus (2)
Gallus gallus (2)
Bombina orientalis (1)
Platynereis dumerilii (1)
Mus booduga (1)
Macaca fuscata (1)
Macaca nemestrina (1)
Teleostei (1)
Plasmodium falciparum (1)
Canis lupus familiaris (1)
Caenorhabditis elegans (1)

Repository

ENA (564)
pride (141)
biostudies-arrayexpress (88)
geo (26)
MetaboLights (11)
dbGaP (5)
MassIVE (5)
BioModels (4)
iProX (2)
jPOST (1)

Tissue

Brain (72)
Cell culture (16)
Cerebrospinal fluid (4)
Neuron (4)
Permanent cell line cell (4)
Amygdala (3)
Hippocampus (3)
Retina (3)
Stem cell (3)
Blood plasma (2)
Blood serum (2)
Embryo (2)
HeLa cell (2)
Liver (2)
Macrophage (2)
Neuron of cerebral cortex (2)
Primary cell (2)
Primary cell line cell (2)
Primary neuron (2)
Sciatic nerve (2)
Spinal ganglion (2)
Adrenal gland (1)
Blood (1)
Blood cell (1)
Blood platelet (1)
Carotid artery (1)
Coelomic epithelium (1)
Coelomic fluid (1)
Corpus callosum (1)
HEK-293 cell (1)

Disease

Alzheimer's disease (14)
Parkinson's disease (5)
Glaucoma (3)
Acute stress disorder (2)
Amyotrophic lateral sclerosis (2)
Cardiovascular system disease (2)
Disease free (2)
Frontotemporal dementia (2)
Leukoencephalopathy with vanishing white matter (2)
Alcohol dependence (1)
Atherosclerosis (1)
Autism spectrum disorder (1)
B-cell adult acute lymphocytic leukemia (1)
Brain cancer (1)
Breast cancer (1)
Creatine transporter deficiency (1)
Duchenne muscular dystrophy (1)
Kabuki syndrome (1)
Leigh disease (1)
Lissencephaly 1 (1)
Mixed disorder as reaction to stress (1)
Neurological alteration (1)
Schizophrenia (1)
Semantic dementia (1)
Syndromic intellectual disability (1)
Tauopathy (1)

Technology Type

Mass Spectrometry (141)
Shotgun proteomics (64)
Bottom-up proteomics (31)
SWATH MS (30)
Affinity purification coupled with mass spectrometry proteomics (22)
Gel-based experiment (16)
Data-independent acquisition (14)
Data-dependent acquisition (9)
DiaPASEF (6)
Mass spectrometry (5)
Mass spectrometry assay (4)
NMR spectroscopy (2)
All-ion fragmentation (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Affinity proteomics (1)
MSE (1)
Mass spectrometry imaging (1)
SRM/MRM (1)

Instrument Platform

Illumina HiSeq 2000 (2)
Q Exactive (2)
Varian (2)
Liquid Chromatography MS - positive - reverse phase (2)
Liquid Chromatography MS - negative - reverse phase (2)
NextSeq 550 (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
6560 Q-TOF LC/MS (1)
Agilent LC-QTOF 6545XT mass spectrometer (1)
Orbitrap Exploris 480 (1)
TimsTOF HT (1)
TripleTOF 6600 (1)
Liquid Chromatography MS - - reverse phase (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - negative (1)
Exactive (Thermo Scientific) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2026 (37)
2023 (32)
2015 (27)
2025 (24)
2024 (23)
2022 (19)
2013 (17)
2014 (16)
2021 (16)
2018 (11)
2016 (9)
2020 (9)
2019 (9)
2011 (8)
2017 (7)
2007 (5)
2012 (3)
2010 (3)
2009 (2)
2005 (1)

CHEBI ID

CHEBI:14314 (5)
CHEBI:16761 (5)
CHEBI:16908 (3)
CHEBI:29108 (3)
CHEBI:1687 (2)
CHEBI:42317 (2)
CHEBI:23616 (2)
CHEBI:13960 (2)
CHEBI:23093 (2)
CHEBI:3593 (2)
CHEBI:57884 (2)
CHEBI:23094 (2)
CHEBI:3588 (2)
CHEBI:14734 (2)
CHEBI:25843 (2)
CHEBI:872 (2)
CHEBI:28907 (2)
CHEBI:11417 (2)
CHEBI:19325 (2)
CHEBI:19306 (2)
CHEBI:41885 (2)
CHEBI:19307 (2)
CHEBI:18900 (2)
CHEBI:495 (2)
CHEBI:4481 (2)
CHEBI:23653 (2)
CHEBI:13582 (2)
CHEBI:11151 (2)
CHEBI:11150 (2)
CHEBI:14135 (2)

Metabolite Name

Uridine (3)
Inosine (3)
N1-Methyl-2-pyridone-5-carboxamide (2)
O-Tyrosine (2)
Valine (2)
Threonine (2)
Proline (2)
Lactate (2)
Histidine (2)
Betaine (2)
Asparagine (2)
Alanine (2)
Valine (2)
Inosine (2)
Glycine (2)
Glycerol (2)
Glucose (2)
Creatinine (2)
Creatine (2)
Choline (2)
Carnitine (2)
Isoleucine (2)
Tyrosine (2)
Leucine (2)
Phenylalanine (2)
ADP (2)
Citrulline (2)
Succinic acid (2)
Pantothenic acid (2)
Methionine (2)

First Public Date

2014 (108)
2025 (70)
2026 (62)
2023 (55)
2024 (46)
2020 (42)
2022 (41)
2021 (35)
2019 (28)
2018 (24)
2017 (22)
2016 (11)
2015 (10)
2013 (10)

Modelling Approach

Constraint-based model (2)
Ordinary differential equation model (2)

Lab affiliation

Department of Molecular and Cellular Neurobiology, Center for Neurogenomics & Cognitive Research, Neuroscience Campus Amsterdam, VU University, Amsterdam, The Netherlands (6)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, Amsterdam, The Netherlands (4)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, The Netherlands (3)
1 Department of Molecular Neurosciences, Center for Brain Research, Medical University of Vienna, Spitalgasse 4, A-1090 Vienna, Austria; 2 Department of Neuroscience, Karolinska Institutet, Retzius väg 8, SE-17177 Stockholm, Sweden (2)
Borch Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana 47907, United States Purdue Institute for Integrative Neuroscience, Purdue University, West Lafayette, Indiana 47907, United States (2)
Center for Neurogenomics and Cognitive Research, Department of Molecular and Cellular Neurobiology, Amsterdam Neuroscience, Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands. (2)
Center of Neurogenomics and Cognitive Research (CNCR), Department of Molecular and Cellular Neurobiology, Vrije Universiteit, Amsterdam, Netherlands (2)
Department of Animal and Poultry Sciences and the School of Neuroscience, Virginia Tech, Blacksburg, VA, USA (2)
Department of Molecular Biology and Endocrinology, “VINČA”, Institute of Nuclear Sciences - National Institute of thе Republic of Serbia, University of Belgrade, Belgrade, Serbia (2)
Department of Molecular and Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Amsterdam Neuroscience, VU Amsterdam, Amsterdam, The Netherlands (2)
Molecular Neuropharmacology and Genetics Laboratory, Department of Neuroscience, Faculty of Health and Medical Sciences, University of Copenhagen, 2200, Denmark (2)
Molecular Neuroscience Research Center, Shiga University of Medical Science, Japan (2)
ULB Neuroscience Institute (UNI) Université Libre de Bruxelles (ULB) B-6041 Gosselies, Belgium. (2)
- Inst. of Neuroscience and Physiology, Dept. of Psychiatry and Neurochemistry, The Sahlgrenska Academy at University of Gothenburg, Mölndal, Sweden - Clinical Neurochemistry Laboratory, Sahlgrenska University Hospital, Mölndal, Sweden - Department of Molecular Neuroscience, UCL Institute of Neurology, Queen Square, London, UK (1)
1 Department of Biological Sciences, College of Arts and Sciences, University of North Texas, Denton, TX 2 Advanced Environmental Research Institute (AERI), University of North Texas, Denton, TX (1)
1 Neuroscience Group of Antioquia, Cellular and Molecular Neurobiology Area, Faculty of Medicine, SIU, University of Antioquia, Calle 70, No. 52-21, Medellin, Colombia. 2 Institute of Biology, Faculty of Exact and Natural Sciences, University of Antioquia, Medellin, Colombia. (1)
1) 1Mitochondrial Neuropathology laboratory, Institut de Neurociències, Universitat Autònoma de Barcelona, Bellaterra, Spain 2) Department of Cellular Biology, Physiology and Immunology, Universitat Autònoma de Barcelona, Bellaterra, Spain. (1)
1. Barts Cancer Institute, Queen Mary University of London; Charterhouse Square, London EC1M 6BQ, UK. 2. Instituto de Parasitología y Biomedicina “López-Neyra” (IPBLN-CSIC); E-18016 Granada, Spain. (1)
1Department of Neuroscience & Center for Translational Research in Neurodegenerative Disease, University of Florida, Gainesville, FL, USA (1)
1Departments of Biomolecular Sciences and Molecular Neuroscience, Weizmann Institute of Science, 7610001 Rehovot, Israel (1)
Ahmet Hoke M.D., Ph.D. FRCPC Professor, Neurology and Neuroscience Director, Neuromuscular Division Director, Merkin Peripheral Neuropathy and Nerve Regeneration Center Editor-in-Chief, Experimental Neurology Johns Hopkins School of Medicine 855 N. Wolfe St., Rangos 248 Baltimore, MD, 21205 USA (1)
Associate Professor of Neurology and Neuroscience (1)
Associate Professor of Neuroscience and BIO5 Institute University of Arizona (1)
Associate Professor, Neuroscience, The Scripps Research Institute Florida (1)
Associate Professor, School of Animal Sciences Core Faculty, School of Neuroscience Associate Professor of Health Sciences Co-Director, Molecular and Cellular Biology (MCB) Graduate Program Virginia Tech (1)
Associate Professor, School of Animal Sciences Core Faculty, School of Neuroscience Faculty of Health Sciences Co-Director, Molecular and Cellular Biology (MCB) Graduate Program Virginia Tech, Blacksburg, VA (1)
Biomedical Neuroscience Institute, Faculty of Medicine, University of Chile, Santiago, Chile Center for Geroscience, Brain Health and Metabolism, Santiago, Chile Program of Cellular and Molecular Biology, Institute of Biomedical Sciences, University of Chile, Santiago, Chile Buck Institute for Research on Aging, Novato, CA, USA (1)
Biomedical Neuroscience Institute, Faculty of Medicine, University of Chile, Santiago, Chile. Center for Geroscience, Brain Health and Metabolism, Santiago, Chile. Program of Cellular and Molecular Biology, Center for Molecular Studies of the Cell, Institute of Biomedical Sciences, University of Chile, Santiago, Chile. (1)
Biomedical Research Institute of Lleida Dr. Pifarré Foundation (IRBLLEIDA) - +Pec Proteomics Research Group (+PPRG) - Neuroscience Area – University Hospital Arnau de Vilanova (HUAV), 80 Av. Rovira Roure, 25198, Lleida, Spain Department of Medical Basic Sciences, University of Lleida (UdL), +Pec Proteomics Research Group (+PPRG), 25198, Lleida, Spain (1)
Borch Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, Indiana 47907, United States Purdue Institute for Integrative Neuroscience, Purdue University, West Lafayette, Indiana 47907, United States (1)

IsPrivate

False (4)

Submitter Keywords

Not Peer Reviewed (1)

Classification

bacteria (2)
protozoa (1)

Modification

N6 (2)
N6-dimethyl-L-lysine (2)

Study type

Transcription profiling by array (72)
RNA-seq of coding RNA (5)
ChIP-chip by tiling array (2)
Methylation profiling by array (2)
RNA-seq of coding RNA from single cells (2)
RNA-seq of total RNA (2)
Other (1)
ChIP-seq (1)
MicroRNA profiling by array (1)

Release Date

2022 (3619)
2023 (3185)
2021 (3158)
2025 (2657)
2020 (2631)
2024 (2512)
2018 (2442)
2019 (2331)
2017 (2090)
2016 (1852)
2015 (1761)
2014 (1588)
2013 (861)
2012 (814)
2011 (722)
2010 (597)
2009 (507)
2008 (404)
2026 (330)
2007 (286)
2006 (215)
2005 (151)
2004 (117)
2003 (90)
2002 (67)
2001 (51)
2000 (50)
1999 (41)
1998 (31)
1997 (17)

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