Moran S S - OmicsDI

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Unknown (2120)
Transcriptomics (64)
Proteomics (59)
Genomics (17)
Metabolomics (9)
Other (1)

Organisms

Homo sapiens (64)
Mus musculus (22)
Saccharomyces cerevisiae (9)
Candida albicans (6)
Rattus norvegicus (6)
Ruegeria pomeroyi DSS-3 (4)
Candida dubliniensis (3)
Bacteria (3)
marine metagenome (2)
Nematostella vectensis (2)
Eucalyptus nitens (1)
Ruegeria pomeroyi (1)
Staphylococcus aureus (1)
Triticum aestivum (1)
Arabidopsis thaliana (1)
Acyrthosiphon pisum (1)
Thalassiosira pseudonana CCMP1335 (1)
Alteromonas macleodii (1)
Apteronotus leptorhynchus (1)
Archaea (1)
Atta columbica (1)
Buchnera aphidicola str. APS (Acyrthosiphon pisum) (1)
Chaetoceros sp. (1)
Daboia palaestinae (1)
Daboia russelii (1)
Ectomocoris (1)
Haloferax volcanii DS2 (1)
Nitrosopumilus maritimus SCM1 (1)
Nitrospira marina Nb-295 (1)
Oncocephalus (1)

Organisms

marine metagenome (1)

Repository

biostudies-arrayexpress (72)
pride (47)
MetaboLights (8)
EGA (7)
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Tissue

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Disease

Disease free (7)
Lung cancer (3)
Malignant neoplasm of ovary (2)
Non-small cell lung carcinoma (2)
Not Available (1)
Autosomal recessive polycystic kidney disease (1)
Multiple myeloma (1)

Technology Type

Mass Spectrometry (47)
Shotgun proteomics (24)
Bottom-up proteomics (13)
Affinity purification coupled with mass spectrometry proteomics (10)
Data-dependent acquisition (8)
Mass spectrometry (7)
Gel-based experiment (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-independent acquisition (2)
Top-down proteomics (2)
AB 5500 Genetic Analyzer (1)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (3)
Illumina HiSeq 2000 (2)
Agilent 7890A GC system, Agilent 5975C MS detector (2)
Q Exactive (2)
Liquid Chromatography MS - negative - reverse phase (2)
Covaris E220evolution (1)
AB SOLiD 4 System (1)
Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
NextSeq 500 (1)
Instrument (1)
LTQ Orbitrap (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap Velos (1)
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Gas Chromatography MS - (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Nuclear Magnetic Resonance (NMR) - (1)
TSQ Vantage (Thermo Scientific) (1)
ESI-ION-TRAP (1)

Publication Date

2011 (18)
2023 (14)
2012 (13)
2010 (11)
2014 (10)
2020 (8)
2016 (8)
2025 (8)
2026 (7)
2021 (7)
2024 (6)
2022 (6)
2015 (5)
2013 (4)
2019 (4)
2007 (3)
2009 (2)
2008 (2)
2017 (2)
2004 (1)
2018 (1)

CHEBI ID

CHEBI:25017 (4)
CHEBI:15428 (3)
CHEBI:16449 (3)
CHEBI:16610 (3)
CHEBI:16709 (3)
CHEBI:17822 (3)
CHEBI:25094 (3)
CHEBI:26271 (3)
CHEBI:27266 (3)
CHEBI:28044 (3)
CHEBI:30769 (3)
CHEBI:15356 (2)
CHEBI:15366 (2)
CHEBI:15741 (2)
CHEBI:15756 (2)
CHEBI:15891 (2)
CHEBI:15978 (2)
CHEBI:16027 (2)
CHEBI:16135 (2)
CHEBI:16411 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16750 (2)
CHEBI:16765 (2)
CHEBI:16811 (2)
CHEBI:16857 (2)
CHEBI:17084 (2)
CHEBI:17148 (2)
CHEBI:17750 (2)
CHEBI:18186 (2)

Metabolite Name

Alanine (2)
Asparagine (2)
Aspartate (2)
Citrulline (2)
Glycine (2)
Homoserine (2)
Isoleucine (2)
Leucine (2)
Ornithine (2)
Phenylalanine (2)
Proline (2)
Putrescine (2)
Spermidine (2)
Threonine (2)
Uridine (2)
Xanthine (2)
1,3-diaminopropane (1)
1-aminocyclopropane-1-carboxylate (1)
1-monolinoelylpalmitin (1)
1-monopalmitin (1)
2,3-Dihydroxypropane-1-sulfonate (1)
2-Oxoadipate (1)
2-adipic acid (1)
2-hydroxyisocaproic_acid (1)
2-keto-l-gluconic_acid (1)
2-ketoisovaleric acid (1)
2-methylbutyric acid (1)
3-Methyl-2-oxovaleric acid (1)
3-amino-2-piperidone (1)
3-hydroxyisobutyric acid (1)

First Public Date

2017 (1)
2014 (1)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)
Not available (1)

Study type

Transcription profiling by array (35)
RNA-seq of coding RNA (11)
Methylation profiling by array (7)
ChIP-seq (5)
ChIP-chip by array (3)
Methylation profiling by high throughput sequencing (3)
RNA-seq of non coding RNA (3)
Comparative genomic hybridization by array (2)
ChIP-chip by tiling array (1)
High-throughput sequencing (1)
Genotyping by array (1)

Release Date

2021 (235)
2023 (231)
2022 (220)
2025 (211)
2024 (174)
2020 (142)
2018 (142)
2019 (125)
2015 (95)
2016 (92)
2017 (86)
2014 (84)
2011 (66)
2013 (65)
2012 (60)
2026 (36)
2010 (32)
2009 (31)
2008 (18)
2007 (13)
2006 (10)
2004 (7)
2005 (6)
2003 (3)
2002 (3)
2001 (2)
2000 (1)
1999 (1)
1997 (1)

Lab affiliation

Department of Cell Biology, Harvard Medical School, Boston MA (3)
Assistant Professor, Evolutionary Venomics Lab, Center for Ecological Sciences, Indian Institute of Science, Bangalore, India (1)
Brigham Young University (1)
Center for Translational Research, Children’s National Research Institute, Children’s National Hospital, Washington,DC, United States & Children’s Hospital of Philadelphia, Philadelphia, PA, United States (1)
Centre for Integrative Bee Research (CIBER) Department of Entomology University of California Riverside, CA 92521 United States of America (1)
Deparment of Chemistry, Syracuse University (1)
Department of Biochemistry, Rappaport Faculty of Medicine, Technion–Israel Institute of Technology, Haifa, 31096, Israel (1)
Department of Biology, Johns Hopkins University, USA (1)
Department of Cell Biology, Harvard Medical School, Boston, MA (1)
Department of Ecology, Evolution and Behavior Alexander Silberman Institute of Life Sciences Faculty of Science The Hebrew University of Jerusalem (1)
Department of Integrated Immunobiology Duke School of Medicine Durham, NC, USA (1)
Department of Marine Chemistry & Geochemistry Woods Hole Oceanographic Institution (1)
Department of ecology, evolution and behavior, Hebrew University of Jerusalem, Jerusalem, Israel (1)
Group Leader School of Biomolecular and Biomedical Science Room F058, Conway Institute, University College Dublin, Belfield, Dublin 4, IRELAND (1)
Hospital for Sick Children, Toronto, Ontario, Canada (1)
Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada (1)
Hospital for Sickkids, Toronto, Ontario, Canada (1)
Immunology, Moffitt Cancer Center, Tampa, FL (1)
Institute for Molecular Biosciences, The University of Queensland (1)
Institute of Cardiovascular Sciences University of Birmingham Birmingham B15 2TT (1)
Marine Chemistry Geochemistry Woods Hole Oceanographic Institution (1)
Marine Chemistry Geochemistry, Woods Hole Oceanographic Institution, US (1)
Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institute, US (1)
Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution (1)
Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA (1)
Molecular Genetics (1)
Molecular Genetics, University of Toronto Hospital for Sick Children, Toronto, Canada (1)
Nancy Moran, Warren J. and Viola Mae Raymer Chair, Professor, The University of Texas at Austin Department of Integrative Biology. nancy.moran@austin.utexas.edu David Taylor, Lorene Morrow Kelley Endowed Faculty Fellowship Fund, Professor, The University ofTexas at Austin Department of Molecular Biosciences. david.taylor@utexas.edu (1)
Northeastern University (1)
Pacific Northwest National Laboratory (1)

Tags

xref:PubMed:20880331 (1)

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Analysis of sulfur-related transcription by Roseobacter communities using a taxon-specific functional gene microarray

The fraction of dissolved dimethylsulfoniopropionate (DMSPd) converted by marine bacterioplankton into the climate-active gas dimethylsulfide (DMS) varies widely in the ocean, with the factors that determine this value still largely unknown. One current hypothesis is that the ratio of DMS formation:...

ORGANISM(S): marine metagenome

2010-08-05 | E-GEOD-21325 | biostudies-arrayexpress

Macular pigment imaging in AREDS2 participants: an ancillary study of AREDS2 subjects enrolled at the Moran Eye Center.

Not available

S-EPMC3444209 | biostudies-literature

A randomized, phase 2 study of deoxyuridine triphosphatase inhibitor, TAS-114, in combination with S-1 versus S-1 alone in patients with advanced non-small-cell lung cancer.

Not available

S-EPMC7497678 | biostudies-literature

Comparative Transcriptomics Reveals Discrete Survival Responses of <i>S. aureus</i> and <i>S. epidermidis</i> to Sapienic Acid.

Not available

S-EPMC5263133 | biostudies-literature

Portal vein thrombosis with protein C-S deficiency in a non-cirrhotic patient.

Not available

S-EPMC4110546 | biostudies-literature

A substrate trapping approach identifies proteins regulated by reversible S-nitrosylation

In this study we adapted the Trx trapping strategy for global profiling of cellular nitrosylation/denitrosylation processes. Using this approach, we report the identification of hundreds of potential new nitrosylated targets in monoctyes and macrophages followed by validation using biochemical and f...

ORGANISM(S): Mus musculus (Mouse) Homo sapiens (Human)

2014-07-02 | PXD001001 | Pride

A Pectin Methylesterase ZmPme3 Is Expressed in Gametophyte factor1-s (Ga1-s) Silks and Maps to that Locus in Maize (Zea mays L.).

Not available

S-EPMC5684833 | biostudies-literature

The maize Ga1-s allele confers protection against ga1 pollen in popcorn and dent corn.

Not available

S-EPMC9718820 | biostudies-literature

Global response of Silicibacter pomeroyi strain DSS3 to dimethyl sulfoniopropionate (DMSP)

Dimethylsufoniopropionate (DMSP) is an important and abundant organic sulfur compound and an important substrate for marine bacterioplankton. The Roseobacter clade of marine alpha-proteobacteria, including Silicibacter pomeroyi strain DSS3, are known to be a key phylogenetic group involved in DMSP d...

ORGANISM(S): Ruegeria pomeroyi

2007-12-09 | E-GEOD-5480 | biostudies-arrayexpress

History of S. aureus Skin Infection Significantly Associates with History of Eczema Herpeticum in Patients with Atopic Dermatitis.

Not available

S-EPMC10539263 | biostudies-literature

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