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TranscriptomicsTranscription profiling of wild type, Mtefd-1 mutant and pPEX-35SMtEFD transformed Medicago truncatula root nodules at 4 and 10 days post innoculation with Sinorhizobium meliloti
Comparison of WT and efd-1 nodule transcriptome, using isolated nodules, at 4 and 10 dpi. Search of EFD possible targets by comparison of transcriptomes from empty vector-tranformed vs. 35S:EFD roots.
ORGANISM(S): Medicago truncatula 
2008-06-01 | E-TABM-393 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Medicago trunculata nodules at different times after inoculation with Sinorhizobium meliloti compared to roots
Nodules were compared to inoculated roots. Nodules 4 days post inoculation (dpi), 10 dpi, 14 dpi were used. At 14 dpi, nitrogen was added and nodules at 16 dpi were harvested. Bacterial mutants ExoA, BacA and FixJ were used and nodules were harvested at 10 dpi.
ORGANISM(S): Medicago truncatula 
2009-07-15 | E-TABM-688 | biostudies-arrayexpress
Transcriptomicsaffy-agro-bi-medicago-AGRO-BI-Toulouse
affy_agro-bi_medicago - Identification of genes from the model legume Medicago truncatula whose expression is affected by the plant nitrogen status, with or without inoculation with the symbiotic bacteria Sinorhizobium meliloti. - Comparison of the supernodulant, nitrogen-insensitive, sunn-2 mutant ...
ORGANISM(S): Medicago truncatula 
2010-10-28 | E-GEOD-17253 | biostudies-arrayexpress
Genomicsena-DATASET-DAVELAB-22-03-2017-21:30:50:663-38 - samples
Whole exome sequencing of hepatosplenic T cell lymphoma (HSTL) tumors, paired normals, and cell lines, including (1) 68 exome capture, paired-end Illumina Hiseq sequencing, BAM files from HSTL tumor samples, (2) 20 exome capture, paired-end Illumina Hiseq sequencing, BAM files from HSTL paired norma...
EGAD00001003246 | EGA
GenomicsGenetic Basis of Hepatosplenic T Cell Lymphoma (HSTL)
Hepatosplenic T cell lymphoma (HSTL) is a rare and lethal lymphoma; the genetic drivers of this disease are unknown.  Through whole exome sequencing of 68 HSTLs, we define recurrently mutated driver genes and copy number alterations in the disease. Chromatin modifying genes including SETD2, INO80 an...
EGAS00001002182 | EGA
GenomicsDAC for Dave Lab, Duke University
Data Access Committee EGAC00001000538
EGAC00001000538 | EGA
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