Motility - OmicsDI

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Tissue

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Neuroblastoma (1)
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Hirschsprung Disease (1)
Congenital digestive tract atresia, gastrointestinal motility disorder, intestinal malrotation, congenital gastrointestinal malformation, Hirschsprung disease, anorectal malformation, neonatal gastrointestinal perforation, pancreaticobiliary maljunction, biliary atresia, portal hypertension, liver fibrosis, congenital airway disease, pulmonary cystic disease, diaphragmatic hernia, vascular or lymphatic malformation, tumor disease, abdominal wall dysplasia, renal urological malformation, malformation syndrome, etc (1)
Colorectal disease (both benign and malignant) (1)
Stage I to III colon cancer (1)
Constipation (1)
Intestinal cancer (1)
Prostatic Neoplasms (1)
Malignant neoplasm of colon (1)

Technology Type

Mass Spectrometry (454)
Shotgun proteomics (221)
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Gel-based experiment (38)
Mass spectrometry (31)
Affinity purification coupled with mass spectrometry proteomics (31)
SWATH MS (27)
Top-down proteomics (17)
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Chemical cross-linking coupled with mass spectrometry proteomics (9)
Mass spectrometry assay (7)
HDMSE (7)
Illumina HiSeq 2000 (2)
Mass spectrometry imaging (2)
All-ion fragmentation (2)
Illumina HiSeq 2500, ILLUMINA, Illumina MiSeq (1)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina (1)
ABI_SOLID, Illumina Genome Analyzer IIx, Affymetrix_GenomeWide_SNP6.34 (1)
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NMR spectroscopy (1)
Metaproteomics (1)
RNA mass spectrometry (1)
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MSE (1)
DiaPASEF (1)
SRM/MRM (1)

Instrument Platform

Illumina NovaSeq 6000 (20)
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Publication Date

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2019 (116)
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2017 (89)
2007 (41)
2006 (37)
2005 (34)
2004 (6)
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UNIPROT ID/AC

O15530 (2)
P31749 (2)
Q16828 (2)
P04049 (2)
Q02750 (2)
P28482 (2)
Q07889 (2)
P98077 (2)
P20936 (2)
Q06124 (2)
P62993 (2)
Q02297 (1)
P21860 (1)
P04626 (1)
P42338 (1)
O00459 (1)
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P42336 (1)
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A4QPA9 (1)
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P00533 (1)
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P27986 (1)
P52565 (1)
P63000 (1)
Q15052 (1)
P60484 (1)

CHEBI ID

CHEBI:30769 (10)
CHEBI:30915 (9)
CHEBI:18012 (8)
CHEBI:17822 (8)
CHEBI:15741 (8)
CHEBI:16919 (8)
CHEBI:18257 (8)
CHEBI:18237 (8)
CHEBI:18066 (7)
CHEBI:17015 (7)
CHEBI:15891 (7)
CHEBI:7916 (7)
CHEBI:37024 (7)
CHEBI:15756 (7)
CHEBI:16335 (7)
CHEBI:16027 (7)
CHEBI:16856 (7)
CHEBI:27897 (7)
CHEBI:17858 (7)
CHEBI:6650 (7)
CHEBI:22660 (7)
CHEBI:25094 (7)
CHEBI:16618 (2)
CHEBI:15422 (2)
CHEBI:49603 (1)
CHEBI:16152 (1)
CHEBI:15996 (1)
CHEBI:17552 (1)
CHEBI:18367 (1)
CHEBI:16761 (1)

Metabolite Name

Uracil (13)
Creatine (13)
Adenosine (12)
Adenine (11)
Glycerophosphocholine (10)
Palmitic acid (10)
Azelaic acid (10)
Taurine (10)
Betaine (9)
Acetylcarnitine (9)
Stearic acid (9)
Riboflavin (9)
Myristic acid (9)
Hypoxanthine (9)
Guanine (9)
Creatinine (9)
Cytidine (9)
Pentadecanoic acid (8)
Thiamine (8)
Eicosapentaenoic acid (8)
Spermidine (8)
Oleic acid (8)
L-Proline (8)
L-Phenylalanine (8)
L-Valine (8)
Inosine (8)
Melibiose (7)
Barbituric acid (7)
Pantothenate (7)
Kynurenic acid (7)

First Public Date

2014 (326)
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2021 (127)
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2019 (116)
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2013 (92)
2017 (74)
2015 (71)
2018 (69)
2016 (53)
2010 (3)
2012 (1)

Modelling Approach

Ordinary differential equation model (6)
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Study status

Completed (7)
Recruiting (5)
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Enrolling by invitation (2)
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Lab affiliation

Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne 3000, Australia (11)
Associate Professor, Department of Biology, Massachusetts Institute of Technology and Whitehead Institute of Biomedical Research (6)
Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (5)
Proteomics & Metabolomics Facility, Center for Open Research Resources & Equipment University of Connecticut Storrs, CT 06269 (4)
Institute of Animal Reproduction and Food Research of Polish Academy of Sciences (4)
Hannover Medical School, Department of Cardiology and Angiology (3)
City University of Hong Kong (3)
University of Edinburgh (3)
Department of Systems Pharmacology and Translational Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA (2)
1VIB Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium 2Department of Biomolecular Medicine, Ghent University, Ghent, 9052, Belgium (2)
Division of Surgery, Oncology, and Pathology, Department of Clinical Sciences, Lund University, Solvegatan 19, 223 62, Lund, Sweden. (2)
Department of Biomedical Chemistry, Graduate School of Medicine, The University of Tokyo (2)
Program in Molecular Medicine, UMass Chan Medical School (2)
Department of Microbial Physiology and Molecular Biology, Institute of Microbiology, University of Greifswald (2)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15 04318 Leipzig, Germany (2)
Cambridge Institute for Medical Research, University of Cambridge, Cambridge Biomedical Campus, CB2 0XY, UK (2)
West China Second University Hospital, Sichuan University (2)
Proteomics and Metabolomics Facility, University of Nebraska- Lincoln (2)
Associate Professor, Department of Biology, Massachusetts Institute of Technology and Whitehead Institute for Biomedical Research (2)
Department of Food Science and Technology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia (2)
China Agricultural University, College of Animal Science and Technolgoy, Animal genetics and breeding (2)
Institut Pasteur, Université Paris Cité, CNRS UAR 2024, Mass Spectrometry for Biology Unit, Paris, France (2)
zhejiang university (2)
Karolinska Institutet, Stockholm, Sweden (2)
Masaryk University, Faculty of Science (2)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (2)
Morpho-phisiology department, Faculty of Medicine, NAtional University of Cuyo. IHEM (Histology and Embriology Institute of Mendoza), CONICET, Mendoza Argentina. (1)
Department of Chemistry and Biomolecular Sciences Faculty of Science and Engineering Macquarie University Sydney, New South Wales, Australia (1)
Associate Professor, Department of Chemistry Associate Professor, Thomas C. Jenkins Department of Biophysics Associate Professor, Department of Biology (1)
chenlab.ca Brandon University (1)

Keyword

Foxy-5 (1)
Wnt-5A (1)
Gynecological malignancies (1)
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Gum chewing (1)
Mosapride (1)
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Electroacupuncture；opioid-induced constipation ,cancer (1)
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Enhanced (1)
Laxative (1)
Nutrition (1)
Colectomy (1)
Laparoscopy (1)

IsPrivate

False (8)

Model Flag

Non Kinetic (1)

Submitter Keywords

Immuno-oncology (1)

Classification

bacteria (278)
protozoa (5)
fungi (1)

Modification

144.102062 (1)
45.987721 (1)
4x(2)H labeled dimethylated residue (1)
15.994915 (1)
6x(2)H labeled dimethylated L-arginine (1)
N6 (1)
N6-dimethyl-L-lysine (1)
57.021464 (1)
Not available (1)

Study type

Transcription profiling by array (724)
RNA-seq of coding RNA (114)
Unknown experiment type (26)
ChIP-seq (24)
Comparative genomic hybridization by array (21)
Methylation profiling by array (14)
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Release Date

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2004 (88)
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2000 (38)
1999 (34)
1998 (25)
1997 (4)

Location

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Thailand (1)
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Metagenomic and Metabolomic Analysis of Gut Microbiota's Impact on Sperm Motility in Rongchang Boars

This study focused on the association between gut microbiota and sperm motility, with an emphasis on analyzing differential metabolites in the intestines and blood of Rongchang boars from the high sperm motility group (group H) and low sperm motility group (group L). The results reveal...

2025-07-14 | MTBLS12712 | MetaboLights

H. pylori G27 HP0518 mutant showed greater motility

Helicobacter pylori is a human gastric pathogen associated with gastric and duodenal ulcers as well as specific gastric cancers. It is well-evidenced that motility is essential for this pathogen to colonize human gastric tissues. We found that the H. pylori G27 HP0518 mutant showed greater motility ...

ORGANISM(S): Helicobacter pylori

2010-12-22 | E-GEOD-14752 | biostudies-arrayexpress

Characterization of Two Outer Membrane Proteins, FlgO and FlgP, that Influence Vibrio cholerae Motility

Vibrio cholerae is highly motile by the action of a single polar flagellum. The loss of motility reduces the infectivity of V. cholerae, demonstrating that motility is an important virulence factor. FlrC is the sigma-54-dependent positive regulator of flagellar genes. Recently, the genes VC2206 (flg...

ORGANISM(S): Vibrio cholerae

2010-05-16 | E-GEOD-17144 | biostudies-arrayexpress

Exome sequencing reveals pathogenic variants in known and novel candidate genes for severe sperm motility disorders

STUDY QUESTION: What are the causative genetic variants in patients with male infertility due to severe sperm motility disorders? SUMMARY ANSWER: We identified high confidence disease-causing variants in multiple genes previously associated with severe sperm motility disorders in 9 out of 21 patien...

EGAS00001005018 | EGA

NOTCH3 is a master-regulator of motility in neuroblastoma and is essential for cell survival

Migratory embryonal neuroblasts give rise to several tissues, including the sympathetic nervous system (SNS). Neuroblastomas are paediatric tumours of the peripheral SNS with a highly variable prognosis. We observed that high NOTCH3 expression in neuroblastomas correlated with a poor prognosis. Expr...

ORGANISM(S): Homo sapiens

2013-08-06 | E-GEOD-16477 | biostudies-arrayexpress

Definition of the AmrZ regulon under a twitching-promoting condition

A novel approach using cellophane sheets was designed to promote Pseudomonas aeruginosa twitching motility, as well as to provide convenience for cell harvest. The AmrZ regulon was defined under this specific growth condition by microarray analysis. WT P. aeruginosa and amrZ mutants were cultivated ...

ORGANISM(S): Pseudomonas aeruginosa

2015-09-06 | E-GEOD-68066 | biostudies-arrayexpress

Germ cell motility clock

PRJNA1366512 | ENA

Swarming motility induces multidrug resistance

PRJNA566190 | ENA

Pf-5 motility TraDIS

Pseudomonas protegens Pf-5 motility TraDIS

PRJEB56281 | ENA

Pediatric to adult transition care in neurogastroenterology and motility: A position paper from the American Neurogastroenterology and Motility Society and European Society of Neurogastroenterology and Motility.

Not available

S-EPMC11486583 | biostudies-literature