Mukherjee B B - OmicsDI

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Unknown (1512)
Transcriptomics (92)
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Homo sapiens (88)
Mus musculus (23)
Escherichia coli (8)
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synthetic construct (1)
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Organisms

Mus musculus (1)

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biostudies-arrayexpress (95)
pride (49)
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Mass Spectrometry (49)
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Instrument Platform

Illumina HiSeq 2000 (7)
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Publication Date

2011 (19)
2015 (15)
2012 (14)
2013 (13)
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2008 (7)
2010 (6)
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2026 (4)
2023 (3)
2009 (3)
2007 (3)
2019 (3)
2018 (3)
2006 (1)
2005 (1)

CHEBI ID

CHEBI:27266 (6)
CHEBI:28044 (6)
CHEBI:15891 (5)
CHEBI:16708 (5)
CHEBI:16737 (5)
CHEBI:16919 (5)
CHEBI:18186 (5)
CHEBI:18211 (5)
CHEBI:18237 (5)
CHEBI:24898 (5)
CHEBI:25094 (5)
CHEBI:27897 (5)
CHEBI:28300 (5)
CHEBI:29016 (5)
CHEBI:15428 (4)
CHEBI:15676 (4)
CHEBI:16027 (4)
CHEBI:16449 (4)
CHEBI:16566 (4)
CHEBI:16811 (4)
CHEBI:17126 (4)
CHEBI:17154 (4)
CHEBI:17306 (4)
CHEBI:17368 (4)
CHEBI:17755 (4)
CHEBI:17822 (4)
CHEBI:18012 (4)
CHEBI:18257 (4)
CHEBI:22653 (4)
CHEBI:22660 (4)

Metabolite Name

Adenine (4)
Cystathionine (4)
AMP (3)
Alanine (3)
Allantoin (3)
Arginine (3)
Asparagine (3)
Citrulline (3)
Creatine (3)
Creatinine (3)
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Glycine (3)
Histidine (3)
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Indolelactate (3)
Isoleucine (3)
Leucine (3)
Lysine (3)
Methionine (3)
Ornithine (3)
Phenylalanine (3)
Phenylpyruvate (3)
Proline (3)
Pseudouridine (3)
Serine (3)
Spermidine (3)
Sphinganine (3)
UMP (3)
Valine (3)

First Public Date

2018 (1)

Study type

Transcription profiling by array (52)
RNA-seq of coding RNA (19)
RNA-seq of non coding RNA (6)
Comparative genomic hybridization by array (5)
Unknown experiment type (3)
Other (3)
Animal - High-throughput sequencing (1)
Proteomic profiling by mass spectrometer (1)
Antigen profiling (1)
ChIP-seq (1)
Methylation profiling by array (1)
Genotyping by high throughput sequencing (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2021 (179)
2022 (178)
2025 (176)
2023 (174)
2024 (122)
2020 (112)
2019 (105)
2016 (76)
2017 (74)
2018 (68)
2015 (64)
2014 (56)
2012 (55)
2013 (51)
2011 (41)
2010 (20)
2026 (18)
2009 (14)
2008 (14)
2007 (4)
2006 (4)
2005 (2)

Lab affiliation

Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (4)
University of Bordeaux, INSERM, MRGM, U1211, F-33000 Bordeaux, France. ImmunoConcEpT, CNRS UMR 5164, INSERM ERL 1303, University of Bordeaux, Bordeaux, France. (3)
Alitea Biotechnology GmbH (1)
Associate Professor, Institute of Advanced Study in Science and Technology (IASST), Guwahati-110035, Assam, India (1)
Biology Department University of Massachusetts Boston Boston, USA (1)
Biomolecular Mass Spectrometry and Proteomics Utrecht Institute for Pharmaceutical Sciences (UIPS) (1)
Department of Biosciences and bioengineering, IIT Bombay, India, 400076 (1)
Department of Chemical and Biological Engineering University of Sheffield Mappin Street, Sheffield S1 3JD United Kingdom (1)
Department of Molecular Biology, Cell Biology, and Biochemistry/Center of Genomics and Proteomics, Brown University, Providence, Rhode Island 02903, USA (1)
Department of Molecular Endocrinology, National Institute for Research in Reproductive Health, Indian Council of Medical Research, Mumbai 400012, India (1)
Department of Neurology, Washington University School of Medicine St Louis (1)
Department of biosciences and Bioengineering, IIT Bombay (1)
Director, CSIR-INDIAN INSTITUTE OF CHEMICAL BIOLOGY, KOLKATA,INDIA (1)
Director, Institute of Advanced Study in Science and Technology (IASST), Vigyan Path, Paschim Boragaon, Guwahati 781035, Assam, India (1)
Director, Institute of Advanced Study in Science and Technology (IASST), Vigyan Path, Paschim Boragaon, Guwahati 781035, Assam, India (lab head) (1)
Dpt. of Microbiology and molecular medicine, Universtity of Geneva, Geneva, Switzerland (1)
Head Proteomics Group , Leiden University Medical Center, Center for Proteomics and Metabolomics, PO Box 9600, Postal zone P1-Q, 2300 RC Leiden, The Netherlands (1)
Institue of Biochemistry 2, Buchmann institute for Molecular Life Sciences (1)
Institute of Biochemistry II, Faculty of Medicine, Goethe University, Theodor-Stern-Kai 7, 60590 Frankfurt am Main, Germany (1)
Institute of Integrative Biology, University of Liverpool, Crown Street, Liverpool, L69 7ZB (1)
Institute of Parasitology, University of Zurich (1)
Institute of Parasitology, University of Zurich, Zurich, Switzerland (1)
Jiangsu Academy of Agricultural Sciences (1)
Justus-Liebig-University Giessen (1)
MRC Protein Phosphorylation and Ubiquitylation Unit, Sir James Black Centre, Dow Street, School of Life Sciences, University of Dundee, Dundee DD1 5EH, Scotland, UK (1)
Max Planck Institute of Biophysics (1)
Max-Delbrück-Centrum für Molekulare Medizin in der Helmholtz-Gemeinschaft (1)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland 21205 USA (1)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, Maryland 21205 USA (1)
Molecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific research, Bengaluru, India (1)

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Large-scale viral genome analysis identifies novel clinical associations between hepatitis B virus and chronically infected patients

Despite the high global prevalence of chronic hepatitis B (CHB) infection, datasets covering the whole hepatitis B viral genome from large patient cohorts are lacking, greatly limiting our understanding of the viral genetic factors involved in this deadly disease. We performed deep sequencing of vir...

EGAS00001003689 | EGA

ena-DATASET-GILD-07-06-2019-00:26:08:971-10 - samples

Deep sequencing of viral samples (average ~9,000x coverage) from patients chronically infected with Hepatitis B (HBV). Whole HBV genome sequencing of 1467 patients (1102 in discovery and 365 in validation cohort) chronically infected with HBV at baseline. The patient population contained HBV genot...

EGAD00001005075 | EGA

DAC for hepatitis B analysis

Data Access Committee EGAC00001001228

EGAC00001001228 | EGA

Structure of antiviral drug bulevirtide bound to hepatitis B and D virus receptor protein NTCP.

Not available

S-EPMC10954734 | biostudies-literature

A catalytic, asymmetric formal synthesis of (+)-hamigeran B.

Not available

S-EPMC3045637 | biostudies-literature

Informatics-Driven Design of Superhard B-C-O Compounds.

Not available

S-EPMC10910474 | biostudies-literature

BJAB Cell Lines Unmodified, Transduced with ith lentiviral vector pNL-SIN-CMV-AcGFP or pNL-SIN-CMV-AcGFP/miR-K12-11

All metazoan eukaryotes express microRNAs (miRNAs), ~22 nt long regulatory RNAs that can repress the expression of mRNAs bearing complementary sequences. Several DNA viruses also express miRNAs in infected cells, suggesting a role in viral replication and pathogenesis. While specific viral miRNAs ha...

ORGANISM(S): Homo sapiens

2007-12-18 | E-GEOD-8867 | biostudies-arrayexpress

Scrutinized lipid utilization disrupts Amphotericin-B responsiveness in clinical isolates of <i>Leishmania donovani</i>.

Not available

S-EPMC12113272 | biostudies-literature

IL-15 temporally reorients IL-10 biased B-1a cells toward IL-12 expression.

Not available

S-EPMC4786629 | biostudies-literature

Mediation of transitional B cell maturation in the absence of functional Bruton's tyrosine kinase.

Not available

S-EPMC5380950 | biostudies-literature