Mussel - OmicsDI

Show results for

Unknown (1259)
Genomics (452)
Transcriptomics (77)
Proteomics (41)
Metabolomics (22)
Models (1)

Organisms

Mytilus galloprovincialis (35)
Andropogon gerardi (35)
Bacteria (35)
Botrytis cinerea (35)
Canis lupus familiaris (35)
Clostridium perfringens (35)
Cnidaria (35)
Cricetulus griseus (35)
Eukaryota (35)
Fasciola (35)
Dreissena polymorpha (11)
Mytilus edulis (9)
Mytilus californianus (8)
Homo sapiens (4)
Sinohyriopsis cumingii (4)
Bathymodiolus azoricus (2)
Rattus norvegicus (2)
Mytilus trossulus (2)
Mytilus coruscus (2)
Ruditapes decussatus (1)
Calyptogena magnifica symbiont (1)
Citrus trifoliata (1)
Pinctada maxima (1)
Vitis vinifera (1)
Danio rerio (1)
Margaritifera margaritifera (1)
Pinctada margaritifera (1)
Perna viridis (1)
Bathymodiolus antarcticus (1)
Bathymodiolus puteoserpentis (1)

Organisms

Mytilus galloprovincialis (36)
Dreissena polymorpha (12)
Limnoperna fortunei (9)
Mytilus coruscus (9)
Mytilus edulis (8)
Gigantidas platifrons (7)
Mytilus californianus (7)
Sinohyriopsis cumingii (6)
Perna viridis (6)
Gigantidas haimaensis (5)
Xenostrobus securis (5)
Beringiana fukuharai (5)
Margaritifera margaritifera (4)
Bathymodiolus azoricus (4)
Arcuatula senhousia (4)
mollusc metagenome (4)
biofilm metagenome (3)
Pseudoalteromonas marina (2)
Bathymodiolus thermophilus thioautotrophic gill symbiont (2)
Elliptio complanata (2)
Perkinsus olseni (2)
Dreissena rostriformis bugensis (2)
Perna canaliculus (2)
Bathymodiolus japonicus (2)
endosymbiont of Bathymodiolus septemdierum str. Myojin knoll (2)
Mytilus chilensis (2)
Inversidens brandtii (2)
Mytilisepta virgata (2)
Mytilus planulatus (2)
sediment metagenome (2)

Repository

ENA (449)
biostudies-arrayexpress (46)
pride (35)
geo (34)
MetaboLights (19)
iProX (5)
GNPS (3)
Cell Collective (1)
MassIVE (1)

Tissue

Gill (12)
Digestive gland (6)
Blood (2)
Blood serum (2)
Foot (2)
Semen (2)
Animal cell (1)
Blood cell (1)
Byssus (1)
Foot muscle (1)
Hemocyte (1)
Hemolymph (1)
Mantle (1)
Oocyte (1)
Sperm (1)
Whole body (1)

Disease

Male infertility (1)

Technology Type

Mass Spectrometry (35)
Shotgun proteomics (23)
Mass spectrometry (15)
Gel-based experiment (6)
Bottom-up proteomics (5)
NMR spectroscopy (3)
Data-dependent acquisition (3)
Mass spectrometry assay (2)
NMR spectroscopy assay (1)
All-ion fragmentation (1)
Mass spectrometry imaging (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Illumina NovaSeq 6000 (4)
Nuclear Magnetic Resonance (NMR) - (3)
Genewiz library construction hardware (2)
Centrifuge, RNeasy Kit (Qiagen) (2)
Scalpel, dry ice (1)
Scalpel, dry ice. (1)
Illumina Genome Analyzer II (1)
Illumina NovaSeq X (1)
NextSeq 2000 (1)
Illumina HiSeq 2500 (1)
LCMS-IT-TOF (1)
N/A (1)
Q Exactive|1001911 (1)
Q Exactive HF (1)
MS Imaging - Atmospheric Pressure Matrix Assisted Laser Desorption/Ionization orbitrap MS - Positive (1)
Direct Infusion MS - Positive (DI-MS (Positive)) (1)
Atmospheric Pressure Matrix Assisted Laser Desorption/Ionization orbitrap MS - Positive (1)
Liquid Chromatography MS - negative- reverse phase (1)
Liquid Chromatography MS - positive- reverse phase (1)
LTQ FT Ultra (Thermo Scientific) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Bruker (1)
MS Imaging - (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - HILIC (1)
Liquid Chromatography MS - positive - HILIC (1)
Liquid Chromatography MS - positive - reverse-phase (1)

Publication Date

2011 (21)
2019 (13)
2023 (12)
2020 (11)
2026 (9)
2025 (9)
2012 (9)
2014 (7)
2010 (7)
2022 (7)
2016 (6)
2015 (5)
2013 (5)
2009 (4)
2024 (4)
2018 (4)
2021 (3)
2008 (3)
2017 (2)
2007 (1)
2006 (1)

CHEBI ID

CHEBI:25017 (4)
CHEBI:16449 (4)
CHEBI:16027 (4)
CHEBI:143745 (3)
CHEBI:143757 (3)
CHEBI:35038 (3)
CHEBI:69061 (3)
CHEBI:17126 (3)
CHEBI:16811 (3)
CHEBI:16359 (3)
CHEBI:17306 (3)
CHEBI:29016 (3)
CHEBI:75342 (3)
CHEBI:17750 (3)
CHEBI:15891 (3)
CHEBI:15741 (3)
CHEBI:78320 (3)
CHEBI:28865 (3)
CHEBI:182784 (2)
CHEBI:195268 (2)
CHEBI:173703 (2)
CHEBI:195271 (2)
CHEBI:173941 (2)
CHEBI:87087 (2)
CHEBI:32389 (2)
CHEBI:27781 (2)
CHEBI:44237 (2)
CHEBI:35033 (2)
CHEBI:139138 (2)
CHEBI:34687 (2)

Metabolite Name

Tris(2-butoxyethyl) phosphate (3)
Cholic acid (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1,4a-dimethyl-9-oxo-7-propan-2-yl-3,4,10,10a-tetrahydro-2H-phenanthrene-1-carboxylic acid (2)
Dibutyl phthalate (DBP) (2)
Lyso-PC(16:0) (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
Malate (2)
35-aminobacteriohopane-31,32,33,34-tetrol (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
Leucine (2)
Aspartate (2)
Taurocholic acid (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
ADP (2)
Monoolein (2)
Methionine (2)
Taurine (2)
Elaidic acid (2)
9(10)-EpOME (2)
Lactate (2)
Alanine (2)
Succinate (2)
Isoleucine (2)
Citrate (2)
Creatine (2)
Tryptophan (2)
Bacteriohopane-32,33,34,35-tetrol (1)

First Public Date

2026 (53)
2024 (48)
2023 (47)
2021 (46)
2025 (41)
2022 (41)
2019 (41)
2020 (37)
2017 (29)
2014 (29)
2018 (13)
2015 (9)
2013 (8)
2016 (7)

Classification

bacteria (1)

Modification

Not available (1)

Study type

Transcription profiling by array (32)
RNA-seq of coding RNA (3)
Animal - High-throughput sequencing (2)
RNA-seq of total RNA (2)
RNA-seq of non coding RNA (2)
Unknown experiment type (1)
Comparative genomic hybridization by array (1)
RIP-seq (1)
ChIP-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2023 (157)
2022 (151)
2021 (118)
2024 (115)
2020 (103)
2025 (94)
2019 (87)
2018 (82)
2017 (78)
2016 (70)
2015 (53)
2014 (48)
2013 (33)
2011 (31)
2012 (21)
2010 (17)
2026 (14)
2009 (12)
2007 (6)
2008 (4)
2006 (4)
2005 (2)
2003 (2)
2001 (1)
2000 (1)
1998 (1)

Lab affiliation

CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France (4)
Department of Biochemistry, Genetics and Immunology, University of Vigo, Spain (4)
Bioanalytical Mass Spectrometry Research Group, Chemistry Department, Université du Québec à Montréal (UQAM) Montréal (Québec) Canada (lab head) (1)
Blue Biotechnology and Ecotoxicology Laboratory (BBE); Interdisciplinary Centre of Marine and Environmental Research (CIIMAR), Porto University (1)
CEA-Marcoule, ProGenoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France (1)
California Polytechnic State University San Luis Obispo ;Biological Sciences Department ; California Unites States (1)
Department of Biology, Maynooth University, Maynooth, Co Kildare, Ireland (1)
Department of Biology,Hong Kong Baptist University, Hong Kong, China (1)
Department of Clinical and Experimental Medicine, Cell biology, Faculty of Health Science Linköping University, SE-581 83 Linköping, Sweden (1)
Department of Geoscience, University of Calgary, Calgary, AB, Canada; Department of Plant and Microbial Biology, North Carolina State University, Raleigh, North Carolina, USA (1)
Immunology, Biomedical Research Center (CINBIO) and Institute of Biomedical Research of Vigo (IBIV), University of Vigo, Vigo, Spain (1)
Instituto Valenciano de Investigaciones Agrarias (IVIA), Polígono La Esperanza nº 100, 12400 Segorbe, Castellón, Spain (1)
Instituto de >Investigaciones Sanitarias de Santiago de Compostela (1)
LAB SCT1006-2, Department of Biology, Hong Kong Baptist University, Hong Kong (1)
LMU - Gene Centre Feodor-Lynen-Straße 25 81377 München Germany (1)
McGill University (1)
Molecular and Cellular Biology Department, University of Guelph, Ontario, Canada (1)
North Carolina State University (1)
PMB, North Carolina State University, USA (1)
Plant and Food Research Institute New Zealand (1)
Professor and president of BGI Academy of Marine Sciences (1)
Professor of Genetic Toxicology and Ecotoxicology School of Biological and Marine Science Plymouth University Plymouth United Kingdom (1)
Symbiosis Department, Max Planck Institute for Marine Microbiology, Bremen, Germany (1)
Systematische Proteomforschung & Bioanalytik - Institut für Experimentelle Medizin (IEM) Christian-Albrechts-Universität zu Kiel Niemannsweg 11 (Campus UK-SH, Kiel) 24105 Kiel, Germany (1)
Tomanek Lab Biological Sciences California Polytechnic State University San Luis Obipso (1)
University of Greifswald, Institut für Pharmazie/C_DAT, Pharmazeutische Biotechnologie, Felix-Hausdorff-Str. 3, 17489 Greifswald (1)
University of Greifswald, Institut für Pharmazie/C_DAT, Pharmazeutische Biotechnologie, Felix-Hausdorff-Str. 3, 17489 Greifswald, Germany (1)
Universität Greifswald Institut für Pharmazie, AG Pharmazeutische Biotechnologie Greifswald, Germany (1)
Zhejiang Ocean University (1)

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Molecular evidence of shipping noise impact on the blue mussel, a key species for the sustainability of coastal marine environments

Anthropogenic oceanic noise due to shipping has increased up to 32-fold over the last five decades, putting marine organisms at risk. While the impact of noise on marine mammals is well documented, its effect on molluscs, which hold immense economic and ecological importance, remain largely unkno...

2025-04-11 | MTBLS5678 | MetaboLights

Metabolomics to elucidate the effects of novel sustainable feed additives in the feed of farmed salmon (HoloFood Trial B - blue mussel-dose response)

An experimental trial was conducted on juvenile farmed Atlantic salmon (Salmo salar) in the framework of the HoloFood project, which aims to test the effect of novel sustainable feed additives in the feed of farmed salmon. Trial B blue mussel was used as a novel sustainable protein feed source in...

2023-06-13 | MTBLS4382 | MetaboLights

Metabolomics to elucidate the effects of novel sustainable feed additives in the feed of farmed salmon (HoloFood Trial C - blue mussel ensilage-dose response)

Testing the effect of blue mussel ensilage as a novel cost-efficient protein feed source for Atlantic salmon feed. Fermentation of novel raw materials for fish feed is a new practice with little prior experience of direct relevance to aquaculture and fish farming. In Trial C, alternative processi...

2023-06-13 | MTBLS4384 | MetaboLights

Untargeted metabolomics analyses and contaminant chemistry of Dreissenid mussels at the Maumee River Area of Concern in the Great Lakes

Bivalves serve as an ideal ecological indicator; hence, their use by the NOAA Mussel Watch Program to monitor environmental health. This study aimed to expand the baseline knowledge of using metabolic end points in environmental monitoring by investigating the dreissenid mussel metabolome in the ...

2024-06-03 | MTBLS6311 | MetaboLights

Mussel (Mytilus galloprovincialis) digestive gland tissue: gene expression profiles across an annual cycle

Transcriptional profiling of natural population of mussels (Mytilus galloprovincialis) -digestive gland tissue- comparing female individuals sampled in the Bizerta Lagoon, Tunisia, across May 2007 - April 2008. Background: Seasonal environmental changes may affect the physiology of Mytilus gallopro...