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TranscriptomicsGene expression in human fungal pathogen Coccidioides immitis changes as mycelia differentiate into spherules and mature
Coccidioides immitis (C. immitis) is a dimorphic fungus that causes disease in mammals including human beings. It grows as a mycelium in the soil but differentiates into a pathogenic structure called a spherule in the host. We compared the transcriptome of C. immitis mycelia and day 2 and day 8 sphe...
ORGANISM(S): Coccidioides immitis RS 
2013-07-11 | E-GEOD-44225 | biostudies-arrayexpress
MetabolomicsInsights into Metabolic Changes Caused by the Trichoderma virens-Maize Root Interaction
The interactions of crops with root-colonizing endophytic microorganisms are highly relevant to agriculture, because endophytes can modify plant resistance to pests and increase crop yields. We investigated the interactions between the host plant Zea mays and the endophytic fungus Trichode...
2021-07-08 | MTBLS1964 | MetaboLights
TranscriptomicsComparison between saprotrophic and biotrophic-like mycelia of cacao WBD causal agent Moniliophthora perniciosa II
Moniliophthora perniciosa is the causal agent of cacao Witche´s broom disease. This disease has been causing extensive damages to Brazilian cacao plantation, especially in Southern Bahia. Using glass slides microarrays, we analyzed the expression profile of 3872 whole genome shotgun reads from M. p...
ORGANISM(S): Moniliophthora perniciosa 
2010-06-25 | E-GEOD-9627 | biostudies-arrayexpress
TranscriptomicsComparison between saprotrophic and biotrophic-like mycelia of cacao WBD causal agent Moniliophthora perniciosa I
Moniliophthora perniciosa is the causal agent of cacao Witche´s broom disease. This disease has been causing extensive damages to Brazilian cacao plantation, especially in Southern Bahia. Using glass slides microarrays, we analyzed the expression profile of 3872 whole genome shotgun reads from M. p...
ORGANISM(S): Moniliophthora perniciosa 
2010-06-26 | E-GEOD-9626 | biostudies-arrayexpress
TranscriptomicsComparison between saprotrophic and biotrophic-like mycelia of cacao WBD causal agent Moniliophthora perniciosa
This SuperSeries is composed of the following subset Series: GSE9626: Comparison between saprotrophic and biotrophic-like mycelia of cacao WBD causal agent Moniliophthora perniciosa GSE9627: Comparison between saprotrophic and biotrophic-like mycelia of cacao WBD causal agent Moniliophthora pernicio...
ORGANISM(S): Moniliophthora perniciosa 
2010-06-26 | E-GEOD-9701 | biostudies-arrayexpress
TranscriptomicsComparison of C. cinerea vegetative dikaryotic to vegetative monokaryotic mycelia
Coprinopsis cinerea vegetative dikaryotic mycelia compared to vegetative monokaryotic mycelia
ORGANISM(S): Coprinopsis cinerea 
2010-02-01 | GSE18540 | GEO
TranscriptomicsDNA microarray comparison of gene expression patterns in Paracoccidioides brasiliensis mycelia and yeasts in vitro.
Paracoccidioides brasiliensis is a thermally dimorphic fungus, which causes the most prevalent systemic mycosis in Latin America. Infection is initiated by inhalation of conidia or mycelial fragments by the host, followed by further differentiation into the yeast form. Information regarding gene e...
ORGANISM(S): Paracoccidioides brasiliensis 
2009-05-07 | E-GEOD-15511 | biostudies-arrayexpress
TranscriptomicsGene expression analysis of monokaryotic and dikaryotic mycelia from Coprinopsis cinerea
Sexual reproduction is an ancient trait that evolved shortly after the appearance of the first eukaryotic cell. In order to identify the set of genes differentially expressed in monokaryotic and dikaryotic mycelia, the poly(A)-positive transcriptomes of C. cinerea Okayama7 and C. cinerea A43mutB43mu...
ORGANISM(S): Coprinopsis cinerea 
2014-06-01 | E-MTAB-1993 | biostudies-arrayexpress
TranscriptomicsA comparative transcriptome analysis reveals physiological maturation properties of mycelia in Pleurotus tuoliensis
Pleurotus tuoliensis is a precious edible fungus with extremely high nutritive and medicinal value. The cultivation period of P. tuoliensis is longer than those of other Pleurotus species, which is mainly due to a longer mycelium physiological maturation period (30-60 days). Currently, the molecular...
ORGANISM(S): Pleurotus tuoliensis 
2019-08-20 | GSE135839 | GEO
TranscriptomicsGene expression analysis of stage 1 primordia and vegetative mycelia from Coprinopsis cinerea
Sexual reproduction is an ancient trait that evolved shortly after the appearance of the first eukaryotic cell. In order to study the transcriptional circuitries driving sexual reproduction in basidiomycota, we sequenced the poly(A)-positive transcriptome of stage 1 primordia and vegetative mycelia ...
ORGANISM(S): Coprinopsis cinerea 
2014-06-01 | E-MTAB-1968 | biostudies-arrayexpress
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