Mycolicibacterium

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Genomics (469)
Unknown (138)
Transcriptomics (130)
Proteomics (42)
Other (8)
Metabolomics (6)

Organisms

Mycolicibacterium smegmatis (76)
Mycolicibacterium smegmatis MC2 155 (63)
Schizophyllum commune H4-8 (16)
Mycobacterium tuberculosis SP7 (16)
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 (16)
Oryza sativa Japonica Group (16)
Rabbit calicivirus (16)
Crotalus durissus terrificus (16)
Mycobacterium tuberculosis (8)
Mycobacterium tuberculosis H37Rv (8)
Mycolicibacterium smegmatis MC2 51 (5)
Mus musculus (4)
Mycobacterium avium subsp. paratuberculosis (3)
Homo sapiens (3)
Mycobacterium phage Butters (2)
Mycobacterium phage Giles (1)
Mycolicibacterium gilvum PYR-GCK (1)
Mycobacterium phage Kampy (1)
Mycobacterium phage Phrann (1)
Mycobacterium phage MichelleMyBell (1)
Mycobacterium phage Charlie (1)
Mycobacterium phage Xeno (1)
Mycobacterium phage Panchino (1)
Mycobacterium phage Xerxes (1)
Mycobacterium phage Redi (1)
Mycobacterium tuberculosis variant bovis (1)
Mycobacterium avium subsp. paratuberculosis K-10 (1)
Mycobacterium phage Island3 (1)
Escherichia coli (1)
Mycolicibacterium sp. ELW1 (1)

Organisms

Mycolicibacterium smegmatis (88)
Mycolicibacterium smegmatis MC2 155 (42)
Mycolicibacterium neoaurum (14)
Mycolicibacterium austroafricanum (10)
Mycolicibacterium senegalense (10)
Mycolicibacterium fortuitum (9)
Mycolicibacterium wolinskyi (8)
Mycolicibacterium peregrinum (7)
Mycolicibacterium llatzerense (6)
Mycolicibacterium gadium (6)
Mycolicibacterium litorale (6)
Mycolicibacterium iranicum (6)
Mycolicibacterium frederiksbergense (5)
Mycolicibacterium mageritense (5)
Mycolicibacterium obuense (4)
Mycolicibacterium phlei (4)
Mycolicibacterium sphagni (4)
Mycolicibacterium nivoides (4)
Mycolicibacterium sp. HK-90 (3)
Mycolicibacterium baixiangningiae (3)
Mycolicibacterium moriokaense (3)
Mycolicibacterium hassiacum DSM 44199 (3)
Mycolicibacterium setense (3)
Mycolicibacterium grossiae (3)
Mycolicibacterium goodii (3)
Mycolicibacterium chlorophenolicum (3)
Mycolicibacterium vaccae (3)
Mycolicibacterium parafortuitum (3)
Mycolicibacterium gilvum (3)
Mycolicibacterium aurum (3)

Repository

ENA (458)
geo (106)
biostudies-arrayexpress (40)
pride (16)
iProX (13)
MassIVE (11)
MetaboLights (4)
GNPS (2)
jPOST (2)
NODE (2)
PanoramaPublic (1)

Tissue

Cell suspension culture (2)
Bone marrow (1)
Permanent cell line cell (1)
Cell culture (1)

Disease

Disease free (1)

Technology Type

Mass Spectrometry (16)
Shotgun proteomics (9)
Bottom-up proteomics (4)
Mass spectrometry (3)
Top-down proteomics (2)
Data-dependent acquisition (2)
Mass spectrometry assay (1)
Gel-based experiment (1)
Data-independent acquisition (1)
SWATH MS (1)

Instrument Platform

NextSeq 550 (8)
LTQ Orbitrap Elite (6)
NextSeq 500 (5)
Q Exactive (3)
Illumina HiSeq 2000 (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
NextSeq 2000 (1)
Illumina MiSeq (1)
Illumina HiSeq 1500 (1)
Agilent 6550 QTOF (1)
TimsTOF HT (1)
Orbitrap Exploris 480 (1)
Q Exactive HF-X (1)
Orbitrap Fusion Lumos (1)
LTQ Orbitrap (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - alternating - hilic (1)

Publication Date

2024 (21)
2023 (20)
2025 (15)
2011 (15)
2022 (15)
2026 (14)
2021 (13)
2013 (11)
2018 (10)
2019 (10)
2020 (9)
2012 (8)
2010 (7)
2016 (6)
2015 (6)
2017 (5)
2014 (4)
2007 (3)
2009 (2)

CHEBI ID

CHEBI:15781 (2)
CHEBI:134344 (1)
CHEBI:174826 (1)
CHEBI:44147 (1)
CHEBI:134607 (1)
CHEBI:87225 (1)
CHEBI:192171 (1)
CHEBI:191608 (1)
CHEBI:176731 (1)
CHEBI:176734 (1)
CHEBI:89241 (1)
CHEBI:90066 (1)
CHEBI:142659 (1)
CHEBI:136476 (1)
CHEBI:176720 (1)
CHEBI:137102 (1)
CHEBI:176692 (1)
CHEBI:168783 (1)
CHEBI:86175 (1)
CHEBI:77093 (1)
CHEBI:173989 (1)
CHEBI:89952 (1)
CHEBI:176696 (1)
CHEBI:176074 (1)
CHEBI:84989 (1)
CHEBI:166576 (1)
CHEBI:68508 (1)
CHEBI:175110 (1)
CHEBI:173524 (1)
CHEBI:42155 (1)

Metabolite Name

Mycothiol (1)
Ergothioneine(1+) (1)
(5alpha,10beta)-6-Allylergoline-8-carboxylic acid (1)
3-Oxodocosanoic acid (1)
MK-9 (1)
MK-9 (H2) (1)
N-[(15Z)-tetracosenoyl]sphinganine-1-phosphocholine (1)
(¡À)-Naringenin (1)
1-icosanoyl-2-[(5Z,8Z,11ZZ,14Z,17Z)-eicosapentaenoyl]-sn-glycerol (1)
OD2400000 (N-Lactoyl ethanolamine) (1)
O,o'-bis(trimethylsilyl)uracil (1)
1,2,3-Trimyristoleoyl Glycerol (1)
1-O-octadecyl-2-arachidonoyl-sn-glycero-3-phosphocholine (1)
LV1850000 (1)
(+/-)-Metanephrine (1)
ACETYL PROLINE (1)
Urs-12-en-3-one (1)
PC(o-18:1(9Z)/18:2(9Z,12Z)) (1)
Methionine S-oxide (1)
5-[(9Z)-9-Hexadecenoyloxy]hexadecanoic acid (1)
Lys-thr (1)
1-hexadecanoyl-2-[(15Z)-tetracosenoyl]-sn-glycero-3-phosphocholine (1)
L-(+)-ERGOTHIONEINE (1)
CE(16:2) (1)
N-[(13Z,16Z)-3-hydroxydocosa-13,16-enoyl]sphingosine-1-phosphocholine (1)
3-Hydroxy-3'-oxo-beta,epsilon-carotene (1)
2-(12-Tridecen-1-yl)furan (1)
2,6,10,10-Tetramethyl-1-oxaspiro[4.5]dec-6-yl acetate (1)
TG(18:2(9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z))[iso3] (1)
3-[(10Z)-10-Heptadecen-1-yl]phenol (1)

First Public Date

2014 (68)
2013 (52)
2022 (44)
2024 (41)
2023 (37)
2021 (35)
2015 (32)
2020 (29)
2019 (26)
2018 (21)
2026 (20)
2025 (20)
2017 (18)
2016 (13)
2012 (2)

Classification

bacteria (15)

Study type

Transcription profiling by array (20)
RNA-seq of coding RNA (7)
ChIP-seq (6)
RIP-seq (3)
RNA-seq of total RNA (2)
Unknown experiment type (1)
Ribo-seq (1)

Release Date

2023 (31)
2024 (30)
2022 (24)
2025 (22)
2020 (17)
2021 (13)
2019 (11)
2013 (7)
2011 (5)
2010 (4)
2026 (3)
2018 (3)
2015 (2)
2012 (2)
2007 (2)
2017 (1)
2016 (1)

Lab affiliation

Professor and Deputy Director, Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University), University Road, Deralakatte, Mangalore 575018, India (2)
Department of Biological Sciences Department of Chemistry & Biochemistry University of Delaware Newark DE, 19716 (1)
Department of Biological Sciences, Department of Chemistry & Biochemistry University of Delaware Newark DE, 19716 (1)
Institute of Organic Chemistry and Biochemistry, CAS, Prague, Czech Republic (1)
University of Hawaii at Manoa School of Life Sciences United States (1)
eilika@mol.biol.ethz.ch (1)
Colorado State University (1)
Laboratory of Protein Mass Spectrometry (1)
Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan - 173234 (H.P.), India (1)
Shemyakin-Ovchinnikov Institute of bioorganic chemistry RAS (1)
University of Leicester, Department of Infection, Immunity & Inflammation and Molecular and Cell Biology, United Kingdom (1)
Case Western Reserve University (1)
Mass Spectrometry Laboratory, Faculty of Biotechnology, University of Wroclaw (1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15, 04318 Leipzig, Germany Phone +49 341 235 4767 (1)
Department of Glycobiology, Institute of Chemistry, Slovak Academy of Sciences (1)

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cryo-EM study of Mycolicibacterium smegmatis membrane protein MmpL5S5

This is the proteomic analysis data of Mycolicibacterium smegmatis membrane protein MmpL5S5 subjected to cryo-EM study.

ORGANISM(S): Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

2025-08-25 | PXD060321 | Pride

Mycolicibacterium smegmatis Membrane protein

RNA-seq of Mycobacteriophage Island3 infection of Mycolicibacterium smegmatis mc2155, Mycolicibacterium smegmatis mc2155(Butters), and Mycolicibacterium smegmatis mc2155(Buttersgp57r)

RNA-seq of Mycobacteriophage Island3 infection of Mycolicibacterium smegmatis mc2155, Mycolicibacterium smegmatis mc2155(Butters), and Mycolicibacterium smegmatis mc2155(Buttersgp57r) to assess the impact of Butters lysogen and specifically Buttersgp57r on transcript levels of island3 during infecti...

ORGANISM(S): Mycolicibacterium smegmatis MC2 155 Mycobacterium phage Island3 Mycobacterium phage Butters

2022-12-24 | GSE221406 | GEO

Mycolicibacterium cyprinidarum

Whole genome sequence of Mycolicibacterium sp, a novel mycolicibacterium species of fish Mycobacteriosis.

PRJDB11807 | ENA

Mycolicibacterium

Mycolicibacterium sp. overview

PRJNA492945 | ENA

Interactome analysis by shotgun proteomics identifies a novel substrate for Mycolicibacterium smegmatis unfoldase ClpC1

Tuberculosis remains a leading cause of worldwide infectious mortality and one of the top ten leading causes of death overall. While advances in public health have contributed to a reduction in tuberculosis cases, the prevalence of multidrug-resistant Mycobacterium tuberculosis (Mtb) (MDR-TB) infect...

ORGANISM(S): Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

2022-12-12 | PXD030385 | Pride

Clp protease Unfoldase clpc1 Shotgun proteomics Tuberculosis Mycolicibacterium smegmatis

Mycolicibacterium iranicum

Mycolicibacterium iranicum strain N1R Genome sequencing and assembly

PRJNA1033383 | ENA

Transcriptome sequencing of Wild Type and msoA mutant type in Mycolicibacterium smegmatis

We identified a novel transcription factor, MsoA, in response to oxidative stress in Mycolicibacterium smegmatis. We hope to discover the regulatory network and target genes of transcription factor msoA by transcriptome sequencing of wild-type and msoA mutants, so as to help us further elucidate the...

ORGANISM(S): Mycolicibacterium smegmatis

2024-12-23 | GSE192553 | GEO

Mycolicibacterium sp. PO1

Mycolicibacterium sp. PO1 Genome sequencing

PRJNA1195550 | ENA

Mycolicibacterium senegalense strain:35FGF

Mycolicibacterium senegalense strain:35FGF Genome sequencing

PRJNA1164745 | ENA

Mycolicibacterium wolinskyi strain:ZJ240206

Mycolicibacterium wolinskyi strain:ZJ240206 Genome sequencing

PRJNA1199355 | ENA

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793 Results

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