Myers B B - OmicsDI

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Unknown (2773)
Transcriptomics (147)
Genomics (46)
Proteomics (40)
Metabolomics (11)
Genomic (2)
Models (1)
Clinical (1)
Multiomics (1)

Organisms

Homo sapiens (107)
Mus musculus (39)
Andropogon gerardi (33)
Bacteria (33)
Canis lupus familiaris (33)
Cnidaria (33)
Eukaryota (33)
Fasciola (33)
Hepatitis B virus (33)
Human alphaherpesvirus 1 strain 17 (33)
Human alphaherpesvirus 1 strain KOS (33)
Human betaherpesvirus 5 (33)
Zea mays (4)
Escherichia coli str. K-12 substr. MG1655 (4)
Enterococcus faecium (3)
Dichelobacter nodosus (2)
Pseudomonas aeruginosa (2)
Drosophila melanogaster (2)
Arabidopsis thaliana (2)
Saccharomyces cerevisiae SK1 (1)
Shewanella oneidensis (1)
Pseudomonas syringae pv. tomato str. DC3000 (1)
Hydra vulgaris (1)
Pan troglodytes (1)
Clostridium acetobutylicum (1)
Glycine max (1)
Mycobacterium tuberculosis H37Rv (1)
Plasmodium falciparum (1)
Saccharomyces cerevisiae (1)
Danio rerio (1)

Organisms

Homo sapiens (9)
Mus musculus (3)

Repository

biostudies-arrayexpress (162)
pride (33)
EGA (16)
ENA (13)
MetaboLights (11)
MassIVE (7)
dbGaP (2)
geo (2)
BioModels (1)

Tissue

Cell culture (6)
Epithelial cell (3)
Blood (2)
Leukocyte (2)
Lung (2)
B cell (1)
Blood plasma (1)
Bone marrow (1)
Carcinoma cell (1)
Colon (1)
Epithelial cell of lung (1)
Epithelial cell of skin gland (1)
Heart (1)
Liver (1)
Logarithmic phase culture (1)
Neoplastic cell (1)
Neutrophil (1)
Pancreas (1)
Pancreatic ductal cell (1)
Permanent cell line cell (1)
Primary cell (1)
Prostate cancer cell line (1)
Prostate gland (1)
Small intestine (1)
Spleen (1)
T cell (1)
Testis (1)
Tooth (1)
Whole body (1)

Disease

Acute leukemia (2)
Breast cancer (2)
Aorta aneurysm (1)
Schizophrenia (1)
Microsatellite stable (MSS) metastatic colorectal cancer (mCRC) (1)
Ataxia telangiectasia (1)
Colon cancer (1)
Kidney cancer (1)
Lung adenocarcinoma (1)
Lung cancer (1)
Melanomatosis (1)
Neutropenia (1)
Pancreatic carcinoma (1)
Pancreatic ductal adenocarcinoma (1)
Systemic mastocytosis (1)
Ulcerative colitis (1)

Technology Type

Mass Spectrometry (33)
Shotgun proteomics (16)
Mass spectrometry (10)
Bottom-up proteomics (8)
Data-dependent acquisition (3)
SWATH MS (3)
Illumina HiSeq 2000 (2)
Data-independent acquisition (2)
Complete Genomics (COMPLETE_GENOMICS) (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)
MSE (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (6)
Illumina NovaSeq 6000 (4)
Liquid Chromatography MS - positive - reverse phase (4)
Illumina HiSeq 2500 (3)
Gene Titan (2)
Illumina HiSeq 4000 (2)
Q Exactive (2)
Affymetrix Gene Titan (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap Elite (1)
Orbitrap Fusion Lumos (1)
Q Exactive Plus (1)
Q-Exactive (1)
QExactive HFX (1)
TripleTOF 5600 (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Liquid Chromatography MS - Alternating (LC-MS (Alt)) (1)
Direct infusion MS - positive (1)
API 4000 QTRAP (AB Sciex) (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2013 (38)
2010 (33)
2012 (16)
2011 (15)
2014 (12)
2016 (10)
2025 (9)
2015 (9)
2024 (9)
2026 (7)
2009 (7)
2023 (6)
2020 (6)
2018 (6)
2008 (6)
2007 (6)
2019 (6)
2022 (5)
2021 (5)
2017 (2)
2006 (2)
2004 (1)

CHEBI ID

CHEBI:72959 (3)
CHEBI:28875 (3)
CHEBI:28842 (3)
CHEBI:15756 (3)
CHEBI:64563 (3)
CHEBI:72522 (2)
CHEBI:85682 (2)
CHEBI:132724 (2)
CHEBI:138567 (2)
CHEBI:180469 (2)
CHEBI:140360 (2)
CHEBI:156040 (2)
CHEBI:85759 (2)
CHEBI:72530 (2)
CHEBI:72510 (2)
CHEBI:134490 (2)
CHEBI:85686 (2)
CHEBI:85683 (2)
CHEBI:137554 (2)
CHEBI:85692 (2)
CHEBI:136288 (2)
CHEBI:72513 (2)
CHEBI:85698 (2)
CHEBI:86980 (2)
CHEBI:86974 (2)
CHEBI:85688 (2)
CHEBI:138568 (2)
CHEBI:138566 (2)
CHEBI:136239 (2)
CHEBI:140362 (2)

Metabolite Name

CE(17:1) (2)
CE(16:1) (2)
LysoPE(0:0/20:5(5Z,8Z,11Z,14Z,17Z)) (2)
Cer(d18:1/14:0) (2)
LysoPE(16:0/0:0) (2)
3-Dehydroxycarnitine (2)
LysoPC(20:4(5Z,8Z,11Z,14Z)) (2)
LysoPC(22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (2)
N-Palmitoylsphingosine (2)
LysoPE(0:0/18:3(6Z,9Z,12Z)) (2)
LysoPE(18:1(9Z)/0:0) (2)
Glutathione (2)
5-Hydroxyindoleacetic acid (2)
LysoPE(16:1(9Z)/0:0) (2)
Asymmetric dimethylarginine (2)
Creatine (2)
Glycerophosphocholine (2)
Hypoxanthine (2)
8-iso-PGF2a-III (1)
PC(30:1) (1)
DG(40:4) (1)
DG(40:5) (1)
DG(40:7) (1)
DG(38:0) (1)
DG(38:1) (1)
DG(38:2) (1)
DG(38:3) (1)
DG(38:4) (1)
DG(36:0) (1)
DG(36:1) (1)

IsPrivate

False (1)

First Public Date

2026 (6)
2024 (2)
2025 (1)
2021 (1)
2020 (1)
2014 (1)
2013 (1)

Modelling Approach

Differential equation model (1)

Study status

Active, not recruiting (1)

Study type

Transcription profiling by array (75)
RNA-seq of coding RNA (25)
ChIP-seq (15)
Methylation profiling by array (13)
ChIP-chip by tiling array (12)
Unknown experiment type (5)
Comparative genomic hybridization by array (5)
RNA-seq of non coding RNA (3)
Other (2)
RNA-seq of coding RNA from single cells (2)
Methylation profiling by high throughput sequencing (2)
Human - Single-cell sequencing (1)
ATAC-seq (1)
Hi-C (1)
Interventional (1)

Release Date

2022 (330)
2021 (300)
2025 (261)
2024 (259)
2023 (257)
2020 (247)
2018 (171)
2019 (152)
2016 (133)
2017 (122)
2015 (121)
2013 (116)
2012 (85)
2014 (84)
2011 (75)
2010 (70)
2009 (41)
2026 (38)
2008 (24)
2007 (16)
2006 (11)
2004 (10)
2005 (4)
2003 (3)
2002 (2)
1998 (2)
1999 (1)

Lab affiliation

Department of Microbiology and Immunology, The Peter Doherty Institute for Infection and Immunity, The University of Melbourne, 792 Elizabeth Street, Melbourne, VIC 3000, Australia. (3)
1VIB Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium 2Department of Biomolecular Medicine, Ghent University, Ghent, 9052, Belgium (2)
1 VIB Center for Medical Biotechnology, VIB, Ghent, East Flanders, 9052, Belgium 2 Department of Biomolecular Medicine, Ghent University, Ghent, East Flanders, 9052, Belgium (1)
Associate Professor of Biochemistry Associate Professor of Cell Biology Duke University School of Medicine (1)
Baxter Laboratory for Stem Cell Biology Department of Microbiology & Immunology Stanford University School of Medicine 269 Campus Drive CCSR 3205b Stanford, CA 94305-5175, USA (1)
Bristol-Myers Squibb, USA (1)
Department of Biochemistry Geisel School of Medicine at Dartmouth (1)
Department of Chemistry, Imperial College London, United Kingdom (1)
Department of Glycobiology, Institute of Chemistry, Slovak Academy of Sciences (1)
Department of Immunology, University of Pittsburgh (1)
Department of Molecular and Medical Genetics, Oregon Health and Science University, Portland, OR USA (1)
Department of Oncological Sciences, Huntsman Cancer Institute, University of Utah School of Medicine, Salt Lake City, UT, USA (1)
Deputy Head of School, School of Biological Sciences | 19 Chlorine Gardens| Belfast, BT9 5DJ Queen’s University Belfast | +44 28 9097 2383 | https://www.qub.ac.uk/schools/SchoolofBiologicalSciences/ (1)
Institute of Biochemistry II, Goethe University, Frankfurt, Germany (1)
MRC Toxicology Unit, University of Cambridge (1)
Member, St. Jude Faculty / Director, Division of Experimental Hematology / Wall Street Committee Endowed Chair St. Jude Children's Reserch Jospital Memphis, TN 38105 (1)
Oncology Research and Development, Pfizer Inc. (1)
Physiology and Pharmacology McCaig Institute Southern Alberta Mass Spectrometry Core facility University of Calgary (1)
Professor of Biomolecular Chemistry at the University of Wisconsin - Madison (1)
Proteomics Platform, Broad Institute of MIT and Harvard (1)
Senior Researcher - Principal Investigator, Computational and Chemical Biology, Istituto Italiano di Tecnologia Via Morego, 30 16163 Genova - Italy Tel: +39 010 28961 - C.F.: 97329350587 - P.Iva: 09198791007 (1)
Systems Biology Ireland, University College Dublin. (1)
The David and Inez Myers Laboratory of Cancer Genetics, Department of Human Molecular Genetics and Biochemistry, Tel Aviv University School of Medicine, Tel Aviv 69987, Israel. (1)
The Forsyth Institute (1)
The Institute of Cancer Research (1)
The University of Queensland (1)
Thoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA 7Present address: Bristol Myers Squibb, Lawrenceville, NJ 08901, USA and Thoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA. (1)
UC Proteomics Laboratory, Department of Cancer Biology, University of Cincinnati College of Medicine, Cincinnati, Ohio, Unite States (1)
University of California San Diego (1)
University of Maryland - College Park Molecular & Cellular Biology (1)

Location

United States (1)
Japan (1)

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