Myxococcus xanthus

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Unknown (458)
Genomics (90)
Proteomics (30)
Transcriptomics (25)
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Other (1)

Organisms

Myxococcus xanthus (27)
Schizophyllum commune H4-8 (23)
Mycobacterium tuberculosis SP7 (23)
Oryza sativa Japonica Group (23)
Crotalus durissus terrificus (23)
Eriocheir sinensis (23)
Candidatus Endoriftia persephonae (23)
Mycobacterium tuberculosis SP10 (23)
Mycobacterium tuberculosis SP13 (23)
Mycobacterium tuberculosis SP22 (23)
Enterobacter ludwigii (23)
Chlamydomonas reinhardtii (23)
Lama (23)
Pyricularia oryzae P131 (23)
Enterococcus mundtii CRL35 (23)
Pongo pygmaeus (23)
Oncorhynchus tshawytscha (23)
Pseudomonas canadensis (23)
Strongylocentrotus purpuratus (23)
Influenza A virus (A/California/04/2009(H1N1)) (23)
Salmonella enterica subsp. enterica serovar Typhimurium (23)
Homo (23)
Bradyrhizobium diazoefficiens (23)
Streptococcus pyogenes STAB901 (23)
Corallococcus macrosporus (1)
Stutzerimonas stutzeri (1)
Geobacter sulfurreducens (1)
Myxococcus xanthus DK 1622 (1)
Escherichia coli (1)
Staphylococcus aureus (1)

Organisms

Myxococcus xanthus (39)
Myxococcus xanthus DK 1622 (4)
Myxococcus xanthus DZ2 (4)
Myxococcus phage Mx9 (1)
Myxococcus phage Mx4 (1)
Myxococcus sp. CA027 (1)
Myxococcus sp. CA023 (1)
Myxococcus sp. CA018 (1)
Myxococcus xanthus DZF1 (1)
Myxococcus stipitatus DSM 14675 (1)
mixed DNA library (1)
Geobacter sulfurreducens (1)

Repository

ENA (88)
pride (23)
geo (16)
biostudies-arrayexpress (12)
MassIVE (7)
GNPS (3)

Tissue

Permanent cell line cell (3)
Cell culture (3)
Blood (1)

Technology Type

Mass Spectrometry (23)
Bottom-up proteomics (10)
Shotgun proteomics (10)
Data-dependent acquisition (3)
HDMSE (2)
MSE (1)
Gel-based experiment (1)

Instrument Platform

Q Exactive Plus (5)
Illumina HiSeq 3000 (2)
NextSeq 500 (2)
6550 Q-TOF LC/MS Agilent (1)
Impact II (1)
Bruker Daltonics instrument model (1)
Orbitrap Fusion (1)
Q Exactive (1)

Publication Date

2025 (14)
2024 (7)
2010 (5)
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2012 (4)
2008 (4)
2018 (4)
2020 (3)
2022 (3)
2009 (2)
2005 (2)
2026 (2)
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2007 (1)
2014 (1)
2019 (1)
2017 (1)

First Public Date

2021 (15)
2014 (12)
2024 (11)
2019 (10)
2013 (7)
2026 (6)
2025 (6)
2023 (5)
2022 (4)
2020 (4)
2018 (3)
2016 (3)
2017 (2)

Classification

viruses (2)

Study type

Transcription profiling by array (5)
Unknown experiment type (3)
RNA-seq of total RNA (3)
High-throughput sequencing (1)

Release Date

2021 (33)
2024 (33)
2023 (33)
2025 (29)
2014 (26)
2022 (23)
2020 (22)
2012 (20)
2018 (19)
2010 (18)
2015 (18)
2019 (17)
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2013 (17)
2011 (17)
2017 (16)
2006 (12)
2008 (11)
2007 (11)
2005 (11)
2009 (10)
2003 (10)
1998 (10)
2002 (9)
1999 (8)
2004 (5)
2001 (5)
2000 (5)
2026 (3)
1997 (1)

Lab affiliation

Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (6)
Department of Molecular Biology, College of Agriculture, Life Sciences and Natural Resources, University of Wyoming, United States of America (3)
Department of Chemistry, University of Marburg, 35043 Marburg, Germany Center for Synthetic Microbiology (SYNMIKRO), 35043 Marburg, Germany Max Planck Fellow Group Molecular Physiology of Microbes, Max Planck Institute for Terrestrial Microbiology, 35043 Marburg, Germany (1)
Lilab,State Key Laboratory of Microbial Technology, Institute of Microbial Technology, Shandong University, Qingdao 266237, P.R. China (1)
Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (1)
Max Planck Institute for terrestrial Microbiology Kar-von-Frisch Str. 10 35091 Marburg Germany (1)
Philipps-University Marburg, Department of Chemistry & SYNMIKRO, Hans-Meerwein-Straße, 35043 Marburg, GERMANY (1)
Max Planck Institute for Terrestrial Microbiology 35043 Marburg Germany (1)
Max Plamck Insitute for Terrestrial Microbiology 35043 Marburg Germany (1)
School of Biosciences, University of Sheffield, Sheffield, UK (1)
Max Planck Institute for Terrestrial Microbiology Marburg Germany (1)
Max Planck Institute for terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (1)
Max Planck Insitute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (1)
Pacific Northwest National Laboratory, USA (1)
Pacific Northwest National Laboratory (1)
Shandong University (1)

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Global profiling of gene expression in the ΔdigR and ΔsgmT mutant of Myxococcus xanthus

In Myxococcus xanthus 55% of the more than 250 two-component signal transduction systems (TCS) genes are orphan. We hypothesized that the histidine kinase SgmT and the response regulator DigR, which comprises a DNA binding domain of the HTH_Xer type, function together to regulate gene expression. We...

ORGANISM(S): Myxococcus xanthus

2012-05-17 | E-GEOD-34408 | biostudies-arrayexpress

Global profiling of developmental gene expression in Myxococcus xanthus

In response to starvation, Myxococcus xanthus initiates a developmental program that results in the formation of spore-filled multicellular fruiting bodies. Here we have used cDNA microarray analysis to determine changes in the global gene expression at different time points of the developmental pro...

ORGANISM(S): Myxococcus xanthus

2008-01-31 | E-GEOD-9477 | biostudies-arrayexpress

Myxococcus xanthus

Myxococcus xanthus Genome sequencing and assembly

PRJNA630034 | ENA

RNA-seq analysis of Myxococcus xanthus at various developmental time points

Myxococcus xanthus is a model organism for studying social behaviors and cell differentiation in bacteria. Upon nutrient depletion, M. xanthus cells initiate a developmental program that culminates in formation of spore-filled fruiting bodies and peripheral rods outside of fruiting bodies. Completio...

ORGANISM(S): Myxococcus xanthus

2021-10-20 | E-MTAB-11043 | biostudies-arrayexpress

Myxococcus xanthus strain:DK1622

Myxococcus xanthus

PRJNA266287 | ENA

Cappable-seq analysis of Myxococcus xanthus at various developmental time points

ORGANISM(S): Myxococcus xanthus

2021-10-20 | E-MTAB-11042 | biostudies-arrayexpress

Myxococcus xanthus strain:R31

Myxococcus xanthus strain:R31 Genome sequencing

PRJNA691445 | ENA

Myxococcus xanthus strain:KYC2794