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MetabolomicsBiocontrol potential and antifungal mechanism of three native endophytic Bacillus

Chinese yam tubers are nutrient-rich but highly susceptible to mechanical damage during harvest, which facilitates pathogenic fungal infection at wound sites. This study aimed to identify pathogenic fungi from postharvest yam wounds and screen native endophytic bacteria with antifungal activity f...

2026-10-06 | MTBLS14657 | MetaboLights
MetabolomicsThe effect of prions on cellular metabolism: The metabolic impact of the [RNQ+] prion and the native role of Rnq1p
Not available
ORGANISM(S): Saccharomyces cerevisiae 
ST002478 | MetabolomicsWorkbench
ProteomicsProSight Native Complex Down Analysis of Aquaporin Z
In this dataset, we analyzed Aquaporin Z using native mass spectrometry. The data was then input into ProSight Native to determine the protein complex composition.
ORGANISM(S): Escherichia coli 
2023-08-14 | PXD038817 | Pride
Native mass spectrometry 
TranscriptomicsNative versus cultured retinal pigment epithelium cells
I. Exp Design 1. Type of experiment: Comparison of native versus cultured RPE cells 2. Experimental factors: Native RPE versus ARPE-19 cells grown on different matrices 3. How many hybridizations in exp: 21 4. If a common reference used for all the hybs: no 5. Quality control steps: three independen...
ORGANISM(S): Homo sapiens 
2010-06-05 | E-GEOD-741 | biostudies-arrayexpress
ProteomicsA new method for differential proteomic analysis utilizing native MS-electropherograms: a comparison between plasma and serum proteins by combining native PAGE, whole-gel slicing and quantitative LC-MS/MS
MS identification has long been used for PAGE-separated protein bands, but global and systematic quantitation utilizing MS after PAGE has remained rare and not been reported for native PAGE. Here we reported on a new method combining native PAGE, whole-gel slicing and quantitative LC-MS/MS aiming c...
ORGANISM(S): Homo sapiens (Human) 
2017-09-08 | PXD006773 | Pride
Gel slicing Quantitative lc-ms/ms Native ms-electropherogram Native 1d-page Human plasma and serum Differential proteomic analysis 
GenomicsNative American Ancient DNA sequencing
The morphology of the first humans in the Americas (Paleoamericans) differs from that of Native Americans, and has raised the question of whether or not there are also differences in origin or genetics. A few populations who survived until relatively recently have been suggested to retain Paleoameri...
EGAS00001001802 | EGA
TranscriptomicsComparison of native versus cultured RPE cells
Description I. Exp Design 1. Type of experiment: Comparison of native versus cultured RPE cells 2. Experimental factors: Native RPE versus ARPE-19 cells grown in different culture conditions 3. How many hybridizations in exp: 20 4. If a common reference used for all the hybs: no 5. Quality control s...
ORGANISM(S): Homo sapiens 
2010-06-05 | E-GEOD-1836 | biostudies-arrayexpress
ProteomicsQuantitative Native Proteomics by Capillary Zone Electrophoresis-Mass Spectrometry
Accurately measuring protein complex dynamics (i.e., composition and/or abundance changes) in cells is vital for advancing fundamental and translational research. In this work, we present a pilot study establishing capillary zone electrophoresis (CZE)-mass spectrometry (MS) based quantitative native...
ORGANISM(S): Escherichia coli 
2025-12-08 | PXD068962 | Pride
Capillary zone electrophoresis-mass spectrometry Quantitative native proteomics 
ProteomicsSelf-packed size-exclusion columns enable versatile high-throughput native, top-down, and ion-mobility-mass spectrometry studies on proteins and complexes.
Native MS (nMS) is a key structural biology technique that makes it possible to study intact proteins and their interactions. Unfortunately, non-volatile salts are incompatiblewith nMS, which demands a laborious desalting procedure. Non-denaturing size exclusion chromatography (SEC) allows both rapi...
ORGANISM(S): Bos taurus (Bovine) Candida albicans (Yeast) Homo sapiens (Human) Escherichia coli Gallus gallus (Chicken) Equus caballus (Horse) 
2025-06-29 | PXD061452 | Pride
Ligand screening Top-down proteomics Native mass spectrometry Size-exclusion chromatography Protac Ion mobility 
TranscriptomicsTranscription profiling of human native odontoblasts and pulp tissue
Knowledge of differential gene expression between pulp and odontoblasts might give insight to the regulation of these spatially related but functionally diverse cells. Our aim was large-scale analysis of expression profiles of native human pulp tissue and odontoblasts, and search for genes expressed...
ORGANISM(S): Homo sapiens 
2008-06-16 | E-GEOD-8694 | biostudies-arrayexpress
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