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TranscriptomicsTranscription profiling by array of human monocyte derived dendritic cells stimulated by lipopolysaccharide (LPS), Mycobacterium vaccae (MV) and Pam3CSK4 (PCSK).
Comparison of human monocyte derived dendritic cell transcriptional responses to stimulation with lipopolysaccharide (LPS), Mycobacterium vaccae (MV) and Pam3CSK4 (PCSK)
ORGANISM(S): Homo sapiens 
2011-04-01 | E-TABM-998 | biostudies-arrayexpress
TranscriptomicsIntracellular expression pattern of recombinant Mtb strain TB294 overexpressing sigma factor A
We previously showed that increased expression of the principal sigma factor, SigA, mediates the capacity of Mycobacterium tuberculosis 210 strains to grow more rapidly in human monocytes, compared to other strains. To identify SigA-regulated genes that favor intracellular mycobacterial growth, we u...
ORGANISM(S): Mycobacterium tuberculosis 
2010-10-08 | E-GEOD-13780 | biostudies-arrayexpress
TranscriptomicsCholesterol's effect on M. tuberculosis
2 experiments: (1) Mtb, Tween vs Cholesterol at 3 & 24hrs (2) CDC1551 vs kstR mutant of CDC1551, with and w/o Cholesterol In triplicate, dye flips included.
ORGANISM(S): Mycobacterium tuberculosis 
2010-06-20 | E-GEOD-13978 | biostudies-arrayexpress
Genomicsnative Tn-seq analysis of ISAba13 in Acinetobacter baumannii AB5075
The experiment contains native Tn-seq data for Acinetobacter baumannii strain AB5075 with different genetic alterations. The strain was grown at 37 degrees in LB medium and genomic DNA was isolated. We then used PCR to select for DNA regions containing a junction between ISAba13 and chromosomal DNA....
ORGANISM(S): Acinetobacter baumannii 
2024-07-15 | E-MTAB-13792 | biostudies-arrayexpress
Genomicsnative Tn-seq analysis of insH3 in Escherichia coli
The experiment contains native Tn-seq data for Escherichia coli strain MG1655. The strain was grown at 37 degrees in LB medium and genomic DNA was isolated. We then used PCR to select for DNA regions containing a junction between insH3 and chromosomal DNA. Libraries were then prepared using these DN...
ORGANISM(S): Escherichia coli 
2024-07-15 | E-MTAB-13793 | biostudies-arrayexpress
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