Ng Charles C - OmicsDI

Show results for

Unknown (346)
Transcriptomics (327)
Genomics (57)
Proteomics (49)
Metabolomics (12)

Organisms

Mus musculus (167)
Homo sapiens (120)
Rattus norvegicus (33)
Ovis aries (10)
Drosophila melanogaster (9)
Salmonella enterica subsp. enterica serovar Typhimurium (6)
Apis mellifera (4)
Arabidopsis thaliana (4)
Schistosoma mansoni (2)
Acinetobacter baumannii (2)
Escherichia coli (2)
Saccharomyces cerevisiae (2)
Bos taurus (2)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (1)
environmental samples (1)
Bacteria (1)
Aspergillus flavus (1)
Amborella trichopoda (1)
Haemophilus influenzae (1)
Macaca mulatta (1)
Pan troglodytes (1)
Gasterosteus aculeatus (1)
unidentified (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 (1)
Staphylococcus aureus (1)
Oryctolagus cuniculus (1)
Vibrio cholerae (1)
Oncorhynchus mykiss (1)
Plasmodium falciparum (1)
Escherichia coli K-12 (1)

Organisms

Homo sapiens (3)
Mus musculus (2)
Rattus norvegicus (1)

Repository

biostudies-arrayexpress (363)
pride (45)
EGA (16)
MetaboLights (12)
ENA (6)
geo (2)
jPOST (1)
MassIVE (1)
PanoramaPublic (1)
PeptideAtlas (1)

Tissue

Cell culture (11)
Brain (7)
Embryo (2)
Adipose tissue (1)
Astrocyte (1)
Blood plasma (1)
Cerebral cortex (1)
Dendritic cell (1)
Early embryonic cell (1)
Fat cell (1)
Femoral muscle (1)
Fibroblast (1)
Ganglionic layer of retina (1)
Gastrocnemius (1)
Glial cell (1)
HT-29 cell (1)
Hypophysis (1)
Hypothalamus (1)
Kidney (1)
Leukocyte (1)
Liver (1)
Lung (1)
Lymph node (1)
Macrophage (1)
Muscle cell (1)
Neuron (1)
Ovary (1)
Pancreatic islet (1)
Retina (1)
T cell (1)

Disease

Normal (5)
Atypical teratoid rhabdoid tumor (3)
Epithelioid mesothelioma (1)
Basal cell carcinoma, Gorlin-Goltz syndrome (1)
Small cell lung cancer (1)
IRAK-4 Q293X mutation (1)
Acute Myeloid Leukemia (1)
Osteosarcoma (1)
Carcinoma (1)
Crohn's disease (1)
Duchenne muscular dystrophy (1)
Glaucoma (1)
Insulin insensitivity (1)
Male infertility (1)
Pneumonia (1)
Wounds and Injuries (1)
Zellweger syndrome (1)

Technology Type

Mass Spectrometry (45)
Shotgun proteomics (24)
Mass spectrometry (10)
Bottom-up proteomics (8)
Affinity purification coupled with mass spectrometry proteomics (7)
Data-dependent acquisition (5)
Data-independent acquisition (5)
Gel-based experiment (2)
Illumina OmniQuad 2.5 - CNVpartition (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
NMR spectroscopy (1)
Mass spectrometry assay (1)
HDMSE (1)
Mass spectrometry imaging (1)
SWATH MS (1)

Instrument Platform

NextSeq 500 (21)
Illumina HiSeq 2000 (10)
Illumina NovaSeq 6000 (7)
NextSeq 2000 (6)
Illumina MiSeq (3)
Illumina HiSeq 4000 (3)
Axon GenePix 4000B scanning hardware (2)
Illumina HiSeq 2500 (2)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (2)
Liquid Chromatography MS - alternating - hilic (2)
Liquid Chromatography MS - positive - reverse phase (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Lab Chip GX touch HT (Perkin Elmer) (1)
Not (1)
Conviron controlled environment chamber (1)
FS450 (1)
GCS3000 (1)
418 [Affymetrix] (1)
ScanArray Express HT [PerkinElmer] (1)
DNBSEQ-G400 (1)
Illumina HiSeq 1000 (1)
Illumina HiSeq 1500 (1)
NextSeq 550 (1)
MS Imaging - positive - direct infusion (1)
QExactive Plus (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
5975C Series GC/MSD (Agilent) (1)
Liquid Chromatography MS - (1)

Publication Date

2014 (55)
2013 (50)
2010 (37)
2016 (32)
2015 (30)
2012 (27)
2023 (23)
2011 (21)
2009 (19)
2020 (16)
2024 (15)
2021 (13)
2008 (13)
2026 (12)
2025 (12)
2022 (12)
2019 (10)
2017 (10)
2006 (7)
2007 (6)
2018 (3)
2005 (1)
2004 (1)

CHEBI ID

CHEBI:15741 (5)
CHEBI:78320 (5)
CHEBI:18012 (5)
CHEBI:30915 (5)
CHEBI:30769 (5)
CHEBI:22660 (4)
CHEBI:28300 (4)
CHEBI:28842 (4)
CHEBI:17821 (4)
CHEBI:16737 (4)
CHEBI:15354 (4)
CHEBI:17596 (4)
CHEBI:15756 (4)
CHEBI:18344 (4)
CHEBI:17368 (4)
CHEBI:75304 (3)
CHEBI:45919 (3)
CHEBI:72999 (3)
CHEBI:17992 (3)
CHEBI:17126 (3)
CHEBI:17234 (3)
CHEBI:16708 (3)
CHEBI:14336 (3)
CHEBI:28044 (3)
CHEBI:16704 (3)
CHEBI:17418 (3)
CHEBI:28875 (3)
CHEBI:6650 (3)
CHEBI:18237 (3)
CHEBI:16196 (3)

Metabolite Name

Thymine (3)
Inosine (3)
Hypoxanthine (3)
Guanosine (3)
Aspartate (3)
Glutamine (3)
Succinate (3)
Nicotinate (2)
Tyramine (2)
Deoxyinosine (2)
Pantothenate (2)
Uridine (2)
Tryptophan (2)
Sarcosine (2)
Malate (2)
Lysine (2)
Homocysteine (2)
Glutamate (2)
Carnitine (2)
Asparagine (2)
Adenine (2)
Xanthine (2)
Phenylalanine (2)
Methionine (2)
Choline (2)
Citrate (2)
Ornithine (2)
Alanine (2)
Lactate (2)
Valine (2)

First Public Date

2024 (1)
2021 (1)
2020 (1)
2019 (1)
2016 (1)
2013 (1)

Modification

15.994915 (1)
57.021464 (1)

Study type

Transcription profiling by array (232)
RNA-seq of coding RNA (40)
ChIP-seq (17)
Comparative genomic hybridization by array (11)
Other (9)
DNA-seq (9)
Methylation profiling by high throughput sequencing (7)
ChIP-chip by array (5)
Methylation profiling by array (4)
ChIP-chip by tiling array (3)
ATAC-seq (3)
GRO-seq (2)
Animal - One-color microarray (2)
Transcription profiling by RT-PCR (2)
RIP-seq (2)
Genotyping by high throughput sequencing (2)
RNA-seq of coding RNA from single cells (2)
RNA-seq of non coding RNA from single cells (1)
Differential (1)
Animal - High-throughput sequencing (1)
Hi-C (1)
ScATAC-seq (1)
CUT&RUN (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2014 (62)
2013 (58)
2023 (56)
2024 (49)
2022 (46)
2016 (46)
2015 (46)
2021 (44)
2010 (41)
2012 (34)
2025 (31)
2020 (31)
2019 (30)
2011 (27)
2017 (26)
2018 (21)
2009 (21)
2008 (15)
2026 (9)
2007 (6)
2006 (6)
2005 (2)
2004 (1)
2003 (1)

Lab affiliation

Charles Perkins Centre, School of Medical Sciences, University of Sydney, Sydney, Australia. (2)
Discovery Proteomics Facility, University of Oxford (2)
Laboratory of Immunity & Cell Communication, BIOCEV, First Faculty of Medicine, Charles University, Vestec, Czech Republic (2)
1) Department of Analytical Chemistry and Biochemistry, AGH University of Krakow, Krakow, Poland 2) Laboratory of Proteomics and Mass Spectrometry, Maj Institute of Pharmacology, Polish Academy of Sciences, Krakow, Poland (1)
Charles Perkins Centre and School of Medical Sciences, University of Sydney, Sydney, Australia. (1)
Charles Perkins Centre, School of Life and Environmental Sciences and Sydney Medical School, University of Sydney, Camperdown, NSW, Australia (1)
Charles Perkins Centre, The University of Sydney (1)
Charles Perkins Centre, University of Sydney, Camperdown, NSW, Australia (1)
Department Functional Proteomics Medizinisches Proteom-Center Ruhr-University Bochum Building ProDi Gesundheitscampus 4 44780 Bochum Germany (1)
Department of Analytical Chemistry, Faculty of Pharmacy in Hradec Králové, Charles University (1)
Department of Chemistry University of Nebraska-Lincoln Lincoln, NE 68588 USA (1)
Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Prague, Czech Republic ORCID logohttp://orcid.org/0000-0001-6976-8446 (1)
Department of Parasitology, Faculty of Science, Charles University, Prague, Czech Republic (1)
Department of Pathophysiology, Second Faculty of Medicine, Charles University in Prague (1)
Dept. Molecular & Cellular Neurobiology, Center for Neurogenomics and Cognitive Research, Neuroscience Campus Amsterdam, VU University Amsterdam, Amsterdam, The Netherlands (1)
Discovery Proteomics Lab, University of Oxford (1)
Faculty of Medicine & Health, The University of Sydney, Camperdown, NSW 2006, Australia. (1)
Host-Parasite Interaction Bernhard Nocht Institute for Tropical Medicine Bernhard-Nocht-Str. 74 20359 Hamburg Germany (1)
IGBMC, Institut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France, UMR7104, UMR-S 1258. (1)
Institut Pasteur, Université Paris Cité, INSERM U1225, Pathogenesis of Vascular Infections unit, F-75015 Paris, France (1)
Institut für Medizinische Mikrobiologie und Hygiene Universitätsklinikum Tübingen Elfriede-Aulhorn-Str. 6, 72076 Tübingen Germany (1)
Institute of Biotechnology, The Czech Academy of Sciences, Vestec, Czech Republic (1)
Laboratoire de Génétique Chromosomique, CHU Grenoble Alpes, Grenoble, France. INSERM U1209, CNRS UMR 5309, Institute for Advanced Biosciences, Team Genetics Epigenetics and Therapies of Infertility, University of Grenoble Alpes, Grenoble, France. (1)
Laboratory of Immunity & Cell Communication, Division BIOCEV, First Faculty of Medicine, Charles University, Vestec, Czech Republic (1)
Mark R. Chance, Ph.D. Vice Dean for Research Charles W. and Iona A. Mathias Professor of Cancer Research Director, Center for Proteomics and Bioinformatics School of Medicine Case Western Reserve University 930 BRB, 10900 Euclid Ave. Cleveland OH 44106 (1)
Medizinisches Proteom-Center, Ruhr-University Bochum and Department of Anesthesia, Intensive Care Medicine and Pain Therapy, University Hospital Knappschaftskrankenhaus Bochum (1)
Professor of Ophthalmology Massachusetts Eye and Ear Harvard Medical School 243 Charles Street Boston, MA 02148 (1)
Proteomics Core Facilities Biogenouest IRSET Inserm U1085 France (1)
Protim - Irset Inserm U1085 (1)
Protim Core Facility - Irset Inserm U1085 - UAR Biosit CNRS 3480 - INSERM 018 (1)

Tags

xref:PubMed:26947176 (2)
xref:PubMed:24238341 (1)
xref:PubMed:34062897 (1)
xref:PubMed:32842712 (1)

Previous page
1 / 80
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 80
Next page

Sort by:

Relevance

Page size

Method Study

High-throughput sequencing (HTS) of antibody amplicon libraries has become a powerful method in the emerging field of systems immunology. However, numerous sources of bias in HTS workflows may affect antibody repertoire data. A crucial step in antibody amplicon library preparation is the addition of...

ORGANISM(S): Mus musculus

2014-02-20 | E-MTAB-2226 | biostudies-arrayexpress

An ovine septic shock model of live bacterial infusion.

Not available

S-EPMC11519284 | biostudies-literature

Atra effect on ERBB2 and RARA-coamplified SKBR-3 cells.

RNA was extracted with Rneasy Micro Kit (Qiagen, France) from SKBR3 cells treated with 1 uM ATRA. The quantity and purity of the extracted RNA was evaluated using a NanoDropTM spectrophotometer and its integrity measured using an Agilent BioanalyzerTM. For microarray hybridizations, 500 ng of total ...

ORGANISM(S): Homo sapiens

2012-03-02 | E-MTAB-1013 | biostudies-arrayexpress

Imidazole ketone erastin induces ferroptosis and slows tumor growth in a mouse lymphoma model

Ferroptosis is a form of regulated cell death that can be induced by inhibition of the cystine-glutamate antiporter, system xc-. Among the existing system xc- inhibitors, imidazole ketone erastin (IKE) is a potent, metabolically stable inhibitor of system xc- and inducer of ferroptosis potentially s...

2019-04-17 | MTBLS774 | MetaboLights

Expression profile of select inflammation-related genes after miR-466l overexpression or knockdown in human macrophages

Human Peripheral blood mononuclear cells (PBMC) were isolated from healthy human whole blood by density gradient centrifugation using Histopaque®-1077 and cultured in RPMI (containing 10% FBS) with 10 ng/ml human recombinant GM-CSF at 37 °C for 7 days. These cells are confirmed as human macrophages....

ORGANISM(S): Homo sapiens

2013-11-08 | E-GEOD-52174 | biostudies-arrayexpress

Prediagnostic Plasma 25-Hydroxyvitamin D and Pancreatic Cancer Survival.

Not available

S-EPMC5012662 | biostudies-literature

Effect of maple syrup extract on the liver of mice fed a high-fat diet

The effects of the administration of maple syrup extract (MSX) on hepatic gene expression were investigated in mice fed high-fat diet. Male C57BL/6J mice aged 3 weeks were purchased from Charles River Japan (Kanagawa, Japan) and housed in a room maintained at 23 ± 1°C and 49 ± 16% humidity with a 12...

ORGANISM(S): Mus musculus

2015-04-30 | E-GEOD-65667 | biostudies-arrayexpress

Rapid Assessment of Lipidomics Sample Purity and Quantity Using Fourier-Transform Infrared Spectroscopy.

Not available

S-EPMC9496531 | biostudies-literature

A novel speckle-tracking echocardiography parameter assessing left ventricular afterload.

Not available

S-EPMC7616760 | biostudies-literature

Proprotein convertase subtisilin/kexin 9 levels decline with hepatitis C virus therapy in people with HIV/hepatitis C virus and correlate with inflammation.

Not available

S-EPMC10841736 | biostudies-literature