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ProteomicsDifferences of uniquely identified peptides between ddaPASEF and diaPASEF
Recent advancements in mass spectrometry-based proteomics have made it possible to conduct comprehensive protein analysis. In particular, the emergence of the data-independent acquisition (DIA) method powered by machine learning has significantly improved protein identification effi-ciency. However,...
ORGANISM(S): Homo Sapiens (human) 
2024-12-01 | PXD056754 | JPOST Repository
Proteomics2H-Thiopyran-2-Thione Sulfine, a Compound For Converting H2S to HSOH/H2S2 and Increasing Intracellular Sulfane Sulfur Levels
Reactive sulfane sulfur species such as persulfides (RSSH) and H2S2 are important redox regulators and closely linked to H2S signaling. However, the study of these species is still challenging due to their instability, high reactivity, and the lack of suitable donors to produce these species. Herein...
ORGANISM(S): Oryctolagus Cuniculus (ncbitaxon:9986) 
2024-02-07 | MSV000094034 | MassIVE
ProteomicsProximity labeling of proteins involved in the mechanism of excisable DD
Excisable DD construct was fused with TurboID and transduced into NIH3T3 cells. The cells were exposed to Shield-1 (1 μM) for 24 h, followed by co-treatment of Shield-1 (1 μM) and biotin (50 µM) for 24 h (biological replicates; n = 3). The cell lysates in guanidine-TCEP buffer were dissolved by heat...
ORGANISM(S): Mus Musculus (mouse) 
2024-01-27 | PXD048060 | JPOST Repository
TranscriptomicsComparative genomic hybridization of 269 individuals from three geographically distinct human populations to investigate copy number variation
We conducted comparative genome hybridization experiments to catalogue the common copy number variation evident between 269 individuals from three geographically distinct human populations (Yoruban, Chinese/Japanese, European) against a single reference individual.
ORGANISM(S): Homo sapiens 
2006-07-31 | E-TABM-107 | biostudies-arrayexpress
TranscriptomicsMicroarray analysis of CD14+ CD163high CD160high cells in human intestinal lamina propria and CX3CR1high CD11b+ CD11c+ cells in murine intestinal lamina propria
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Homo sapiens 
2016-07-17 | E-GEOD-79629 | biostudies-arrayexpress
TranscriptomicsMicroarray analysis of CX3CR1high CD11b+ CD11c+ cells in murine intestinal lamina propria
Several innate immune cell subsets have recently been identified to maintain gut homeostasis in both human and mice. Among these subsets, CX3CR1high CD11b+ CD11c+ cells contribute to intestinal tolerance through various mechanisms in mice. However, whether tolerogenic innate myeloid cells are presen...
ORGANISM(S): Mus musculus 
2016-07-17 | E-GEOD-79628 | biostudies-arrayexpress
TranscriptomicsMicroarray analysis of CD14+ CD163high CD160high cells in human intestinal lamina propria
Several innate immune cell subsets have recently been identified to maintain gut homeostasis in both human and mice. Among these subsets, CX3CR1high CD11b+ CD11c+ cells contribute to intestinal tolerance through various mechanisms in mice. However, whether tolerogenic innate myeloid cells are presen...
ORGANISM(S): Homo sapiens 
2016-07-17 | E-GEOD-79627 | biostudies-arrayexpress
TranscriptomicsDiversity of HrpL-regulons across Pseudomonas syringae isolates
We implemented transcriptional analysis methods using cDNA and high-throughput sequencing data to identify HrpL-regulated genes for six strains of Pseudomonas syringae Each Pseudomonas syringae strains was transformed with either pBAD::EV or pBAD containing native hrpL sequence. Strains were grown i...
ORGANISM(S): Pseudomonas syringae 
2014-01-01 | E-GEOD-46930 | biostudies-arrayexpress
UnknownGlobal variation in copy number in the human genome.
Not available
S-EPMC2669898 | biostudies-literature
UnknownFirst asteroid gas sample delivered by the Hayabusa2 mission: A treasure box from Ryugu.
Not available
S-EPMC11627213 | biostudies-literature
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