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MetabolomicsLinking soil biology and chemistry in biological soil crust using isolate exometabolomics
Metagenomic sequencing provides a window into microbial community structure and metabolic potential; however, linking these data to exogenous metabolites that microorganisms process and produce (the exometabolome) remains challenging. Previously, we observed strong exometabolite niche partitioning a...
2018-07-31 | MTBLS492 | MetaboLights
MetabolomicsThe influence of different microplastics on soil metabolic processes
We investigated the changes in soil microorganisms and their metabolic processes under microplastic pollution by adding different types and concentrations of microplastics (polypropylene plastic, polyethylene terephthalate plastic, polyhexanediol/caprolactone microplastics) to agricultural soil.
2026-07-30 | MTBLS15204 | MetaboLights
MetabolomicsMetabolomics reveals changes in soil metabolic profiles during vegetation succession in karst area
The metabolite characteristics of karst soils with different vegetation stages (grassland, brushwood, secondary forest and primary forest) based on untargeted metabolomics were investigated.
2025-07-07 | MTBLS10439 | MetaboLights
MetabolomicsCo-exposure of di(2-ethylhexyl) phthalate (DEHP) decreased the submicron plastic stress in soil-plant system

The widespread use of agricultural plastic films has made micro- and nanoplastics (MNPs) and phthalate esters (PAEs) contaminants of emerging concern in agroecosystems. However, the interactive mechanisms underlying their combined pollution in soil-plant systems remain elusive. To fill this gap, ...

2025-08-22 | MTBLS12878 | MetaboLights
MetabolomicsThe Cd-tolerance of pepper (Capsicum annuum L.) is linked with rhizosphere bacterial community composition and rhizosphere soil metabolites profiles

Cadmium (Cd) poses a serious threat to plant growth, so the selection and breeding of Cd-tolerant pepper cultivars is an effective method to reduce Cd hazards. This study identified C. annuum G03 as a Cd-tolerant cultivar, evidenced by its superior leaf physiological activity under Cd stress comp...

2025-10-23 | MTBLS13200 | MetaboLights
ProteomicsMetaproteomic datasets of wheat rhizosphere from saline and non-saline soils
We present metaproteome data from wheat rhizosphere from saline and non-saline soil. For collection and acquisition of metaproteome from wheat rhizosphere under saline and normal conditions, a survey was conducted in regions of Haryana, India. Samples from 65 days old plants (wheat var HD2967) were ...
ORGANISM(S): rhizosphere soil bacteria ensemble 
2024-01-08 | PXD015387 | Pride
Lc msms Normal soil Saline soil Soil microbial proteins Microbiota Metaproteome Wheat rhizosphere 
MetabolomicsMetabolic Remodeling of Soil Ecosystems by the medicinal fungus Wolfiporia cocos: Bidirectional Feedback and Functional Consequences
Widely targeted metabolomics based on UPLC-MS/MS was performed to explore metabolic differences between two tissues of Wolfiporia cocos sclerotium. Samples include inner white tissue (Fuling Bai) and outer layer (Fuling Pi) of sclerotium, with 3 biological replicates for each group. A total of 1565 ...
2027-08-10 | MTBLS15360 | MetaboLights
TranscriptomicsTranscriptional plasticity of a soil arthropod across different ecological conditions
It has long been recognized that species occupy a specific ecological niche within their ecosystem. The ecological niche is defined as the number of conditions and resources that limit species distribution. Within their ecological niche, species do not exist in a single physiological state but in a ...
ORGANISM(S): Folsomia candida 
2011-02-15 | E-GEOD-21213 | biostudies-arrayexpress
TranscriptomicsMicroarray analyses of high Arctic soil bacterial response to hydrocarbon pollution and bioremediation
This SuperSeries is composed of the following subset Series: GSE17517: Microarray analysis of high Arctic soil bacterial response to hydrocarbon pollution and bioremediation GSE17532: RT-PCR analysis of high Arctic soil bacterial response to hydrocarbon pollution and bioremediation Refer to individu...
ORGANISM(S): Bacteria 
2009-08-07 | E-GEOD-17533 | biostudies-arrayexpress
TranscriptomicsFolsomia candida exposed to soil containing different phenanthrene concentrations
Polycyclic aromatic hydrocarbons are common pollutants in soil, have negative effects on soil ecosystems, and are potentially carcinogenic. The Springtail (Collembola) Folsomia candida is often used as an indicator species for soil toxicity. Here we report a toxicogenomic study that translates the e...
ORGANISM(S): Folsomia candida 
2010-05-18 | E-GEOD-14207 | biostudies-arrayexpress
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