Oac - OmicsDI

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Unknown (1379)
Proteomics (42)
Transcriptomics (33)
Genomics (32)
Metabolomics (3)
Models (1)
Methylation profiling (1)
Other (1)

Organisms

Homo sapiens (37)
Bombyx mori (37)
Schizosaccharomyces pombe (37)
Human immunodeficiency virus 1 (37)
Oryza sativa Indica Group (37)
Sinorhizobium meliloti BL225C (37)
Sus scrofa domesticus (37)
Ostreococcus tauri (37)
Saccharomyces cerevisiae (37)
Synechocystis sp. PCC 6803 (37)
Vitis vinifera (37)
Staphylococcus aureus (37)
Rattus norvegicus (37)
Escherichia coli (37)
Candida albicans (37)
Cyanophora paradoxa (37)
Bursaphelenchus xylophilus (37)
Pseudomonas aeruginosa SJTD-1 (37)
Rhizobium sp. Leaf68 (37)
Canis lupus familiaris (37)
Camelus dromedarius (37)
Entamoeba histolytica (37)
Physcomitrium patens (37)
Methylohalobius crimeensis 10Ki (37)
Pseudomonas putida BIRD-1 (37)
Mus musculus (5)
Glycine max (2)
Drosophila melanogaster (2)
Escherichia coli K-12 (1)
Caenorhabditis elegans (1)

Organisms

Homo sapiens (9)
Glycine max (5)
Phaseolus vulgaris (1)

Repository

pride (37)
biostudies-arrayexpress (31)
ENA (22)
geo (9)
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iProX (1)

Tissue

Cell culture (6)
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Barrett's esophagus (1)
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Disease

Esophagus adenocarcinoma (2)
Gastroesophageal cancer (1)
Barrett's esophagus (1)
Barrett's adenocarcinoma (1)
Adenocarcinoma (1)
Esophageal cancer (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (37)
Shotgun proteomics (11)
HDMSE (9)
Bottom-up proteomics (8)
Gel-based experiment (3)
Affinity purification coupled with mass spectrometry proteomics (3)
Mass spectrometry (2)
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Chemical cross-linking coupled with mass spectrometry proteomics (2)
MSE (1)
SWATH MS (1)
Data-independent acquisition (1)
Top-down proteomics (1)

Instrument Platform

Illumina HiSeq 4000 (6)
NextSeq 500 (3)
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Illumina HiSeq 3000 (2)
Q Exactive HF (2)
Illumina Genome Analyzer IIx (1)
418 [Affymetrix] (1)
Illumina NovaSeq 6000 (1)
LTQ Orbitrap Elite (1)
Orbitrap Eclipse (1)
Q Exactive (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2025 (13)
2020 (10)
2024 (8)
2022 (7)
2026 (7)
2021 (7)
2019 (4)
2017 (4)
2016 (4)
2014 (4)
2010 (3)
2023 (3)
2018 (2)
2015 (2)
2013 (2)
2012 (2)
2011 (2)
2008 (2)

UNIPROT ID/AC

P0A9M8 (1)
P27550 (1)

CHEBI ID

CHEBI:30089 (1)
CHEBI:15350 (1)
CHEBI:15351 (1)
CHEBI:75195 (1)
CHEBI:138553 (1)
CHEBI:138554 (1)
CHEBI:74240 (1)
CHEBI:72072 (1)
CHEBI:72076 (1)
CHEBI:91073 (1)
CHEBI:72065 (1)
CHEBI:72059 (1)
CHEBI:143617 (1)
CHEBI:143618 (1)
CHEBI:91065 (1)
CHEBI:72064 (1)
CHEBI:138909 (1)
CHEBI:74371 (1)
CHEBI:74241 (1)
CHEBI:138914 (1)
CHEBI:72066 (1)
CHEBI:72075 (1)
CHEBI:72084 (1)
CHEBI:75196 (1)
CHEBI:91045 (1)
CHEBI:134459 (1)
CHEBI:74375 (1)
CHEBI:72083 (1)
CHEBI:72074 (1)
CHEBI:72058 (1)

Metabolite Name

PI(39:5) (1)
PI(39:6) (1)
PI(35:1) (1)
PS(33:1) (1)
PS(36:0) (1)
PE(34:1) (1)
PS(42:2) (1)
PS(42:1) (1)
PS(40:2) (1)
PS(40:1) (1)
PS(38:5) (1)
PS(38:3) (1)
PS(38:2) (1)
PS(38:1) (1)
PS(37:4) (1)
PS(36:3) (1)
PS(34:1) (1)
SM(18:1) (1)
SM(18:0) (1)
SM(16:0) (1)
PE(38:0) (1)
PE(32:1) (1)
PG(32:0) (1)
PG(32:1) (1)
PG(34:2) (1)
PI(35:2) (1)
PI(37:4) (1)
PI(38:3) (1)
PI(38:5) (1)
PI(40:4) (1)

IsPrivate

False (1)

First Public Date

2014 (5)
2023 (4)
2024 (3)
2020 (3)
2021 (2)
2026 (1)
2025 (1)
2022 (1)
2017 (1)
2016 (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (12)
RNA-seq of coding RNA (7)
Genotyping by array (2)
ATAC-seq (2)
DNA-seq (2)
MRE-seq (1)
One-color microarray (1)
Cell line - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)
Other (1)
ChIP-seq (1)

Release Date

2022 (196)
2023 (151)
2024 (145)
2025 (142)
2021 (140)
2020 (126)
2019 (97)
2018 (94)
2017 (73)
2016 (46)
2015 (41)
2014 (34)
2012 (25)
2010 (20)
2013 (19)
2026 (16)
2011 (15)
2008 (10)
2009 (9)
2006 (3)
2003 (3)
2004 (2)
2005 (1)
2002 (1)
2001 (1)

Lab affiliation

Protein Biogenesis Laboratory, Francis Crick Institute, London, UK (2)
Molecular Parasitology and Entomology Unit,Laboratory of Malaria and Vector Research, National Institutes of Health. USA. (2)
Protein Biogenesis Lab, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT (2)
Department of Chemical and Biological Physics, The Weizmann Institute of Science, Rehovot, Israel (1)
School of Medicine, University of St Andrews, St Andrews, KY16 9TF, United Kingdom. (1)
Group leader, Protein Biogenesis Laboratory Francis Crick Institute 1 Midland Road London NW1 1AT (1)
Division of Molecular and Cellular Function School of Biological Sciences Faculty of Biology Medicine and Health (1)
Institure of Molecular Pathology (1)
Brigham and Women's Hospital Boston, MA 02115, USA (1)
Howard Hughes Medical Institute Department of Molecular Biology and Genetics, Johns Hopkins Medical Institute 725 N. Wolfe Street 714 PCTB Baltimore, MD 21205 410-614-4928 (1)
Howard Hughes Medical Institute and Department of Molecular Biology and Genetics, Johns Hopkins Medical Institute, 725 N. Wolfe Street 714 PCTB Baltimore, MD 21205 410-614-4928 (1)
Institute of Molecular Biology gGmbH, Mainz, Germany Institute of Developmental Biology and Neurobiology (IDN), Johannes Gutenberg-Universität Mainz, Germany (1)
University of Muenster, Institute for Physical Chemistry, Corrensstrasse 30, 48149 Muenster, Germany (1)
MRC Laboratory of Molecular Biology, Cell Biology Division (1)
Institute of Genetics and Cancer (IGC), University of Edinburgh, Edinburgh, Scotland (1)
Innovative Genomics Institute, Room 212C 2151 Berkeley Way Berkeley CA 94720 (1)
University of Geneva (1)
1Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN, USA. 2Center for Plant Biology, Purdue University, West Lafayette, IN, USA. 3Department of Biological Sciences, Purdue University, West Lafayette, IN, USA. (1)
1 Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN 2 Center for Plant Biology, Purdue University, West Lafayette, IN 3 Department of Biological Sciences, Purdue University, West Lafayette, IN (1)
1. Department of Botany and Plant Pathology, Purdue University, West Lafayette, IN, USA. 2. Center for Plant Biology, Purdue University, West Lafayette, IN, USA. 3. Department of Biological Sciences, Purdue University, West Lafayette, IN, USA. (1)
Full Professor, Director Of Academic Centre - Conway Institute School of Public Health, Physiotherapy and Sports Science (1)
Heidelberg University Centre for molecular biology (ZMBH) Im Neuenheimer Feld 282 69120 Heidelberg Germany (1)
Molecular Parasitology and Entomology Unit; Laboratory of Malaria and Vector Research; National Institutes of Health (1)
Institute of Parasitology, McGill University, 21111 Lakeshore Road, Ste. Anne de Bellevue, Montreal, Quebec H9X3V9, Canada (1)
Protein Biogenesis Lab, The Francis Crick Institute, London, NW1 1AT (1)
Max Planck Institute of Biochemistry Department of Cellular Biochemistry Am Klopferspitz 18 82152 Martinsried, Germany (1)
Max Planck Institute of Biochemistry, Department of Cellular Biochemsitry (1)
Department of Chemistry & Chemical Biology, Northeastern University (1)
The Mount Desert Island Biological Laboratory (1)
Center for Mechanisms of Evolution, Biodesign Institute, School of Life Sciences, Arizona State University, Tempe, Arizona, USA (1)

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Phaseolus vulgaris cultivar:OAC Rex

Phaseolus vulgaris cultivar:OAC Rex Genome sequencing and assembly

PRJNA237957 | ENA

KAS-seq of Barrett's oesophagus & OAC patients

PRJEB75915 | ENA

KAS-seq of Barrett's oesophagus & OAC patients

To investigate changes to eRNA transcripts in Barrett's oesophagus & OAC patients.

ORGANISM(S): Homo sapiens

2024-09-25 | E-MTAB-14091 | biostudies-arrayexpress

Proteomic signatures of radioresistance: Alteration of inflammation, angiogenesis and metabolism-related factors in radioresistant oesophageal adenocarcinomav

The clinical management of locally advanced oesophageal adenocarcinoma (OAC) commonly involves neoadjuvant chemoradiotherapy (CRT), but complete pathological response to CRT only occurs in 20-30% of patients, as radioresistance remains a major clinical challenge. In this study we used an established...

ORGANISM(S): Homo sapiens (Human)

2022-08-18 | PXD020303 | Pride

Oesophageal adenocarcinoma Oac

Glycine max cultivar:OAC Bayfield

Glycine max cultivar:OAC Bayfield Targeted Locus (Loci)

PRJNA785774 | ENA

ATAC-seq of Oesophageal Cell Lines

ATAC-seq in oesophageal cell lines, OE33 (OAC), FLO1 (OAC), HET1A (Normal)

ORGANISM(S): Homo sapiens

2016-09-12 | E-MTAB-4209 | biostudies-arrayexpress

Transcription profiling of mouse blood from native and Plasmodium berghei induced experimental cerebral malaria untreated or treated with activated charcoal.

We found that oral activated charcoal (oAC) provided significant protection against P. berghei ANKA-induced ECM, significantly increasing overall survival time compared to untreated mice. Protection from ECM by oAC was associated with a reduced numbers of splenic TNF+ CD4+ T cells and multifunction...

ORGANISM(S): Mus musculus

2010-04-01 | E-MEXP-2594 | biostudies-arrayexpress

C. elegans OAC mutants metabolomics in negative polarity

negative polarity of metabolomic data of C. elegans OAC mutants

ORGANISM(S): Caenorhabditis Elegans (ncbitaxon:6239)

2021-10-11 | MSV000088210 | MassIVE

Identification of a divergent O-acetyltransferase gene oac 1b from Shigella flexneri serotype 1b strains.

Not available

S-EPMC3630932 | biostudies-literature