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TranscriptomicsChromatin immunoprecipitation of tissue-specific transcriptional regulators in mouse and human liver to measure binding at regulatory regions of homologous genes
To identify experimentally both conserved and evolving aspects of transcriptional regulation, we have measured the binding of key transcriptional regulators, RNA polymerase II and histone methylation in mouse and human liver at regulatory regions of homologous genes. As expected, the set of genes f...
ORGANISM(S): Homo sapiens 
2006-10-03 | E-TABM-108 | biostudies-arrayexpress
TranscriptomicsRNA-seq of poly-A enriched total RNA of brain, liver, kidney, heart and skeletal muscle samples from frog
This experiment contains the Xenopus tropicalis subset of data from the experiment E-GEOD-41338 (http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-41338/). mRNA profiles of several organs (brain, liver, kidney, heart, skeletal muscle) in multiple vertebrate species (mouse, chicken, lizard, frog, ...
ORGANISM(S): Xenopus tropicalis 
2012-12-22 | E-MTAB-3726 | biostudies-arrayexpress
TranscriptomicsRNA-seq of poly-A enriched total RNA of brain, liver, kidney, heart and skeletal muscle samples from chicken
This experiment contains the Gallus gallus subset of data from the experiment E-GEOD-41338 (http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-41338/). mRNA profiles of several organs (brain, liver, kidney, heart, skeletal muscle) in multiple vertebrate species (mouse, chicken, lizard, frog, puffe...
ORGANISM(S): Gallus gallus 
2012-12-22 | E-MTAB-3724 | biostudies-arrayexpress
TranscriptomicsRNA-seq of poly-A enriched total RNA of brain, liver, kidney, heart and skeletal muscle samples from lizard
This experiment contains the Anolis carolinensis subset of data from the experiment E-GEOD-41338 (http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-41338/). mRNA profiles of several organs (brain, liver, kidney, heart, skeletal muscle) in multiple vertebrate species (mouse, chicken, lizard, frog,...
ORGANISM(S): Anolis carolinensis 
2012-12-22 | E-MTAB-3727 | biostudies-arrayexpress
TranscriptomicsRNA-seq of poly-A enriched total RNA of brain, liver, kidney, heart and skeletal muscle samples from mouse
This experiment contains the Mus musculus subset of data from the experiment E-GEOD-41338 (http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-41338/). mRNA profiles of several organs (brain, liver, kidney, heart, skeletal muscle) in multiple vertebrate species (mouse, chicken, lizard, frog, puffer...
ORGANISM(S): Mus musculus 
2012-12-22 | E-MTAB-3725 | biostudies-arrayexpress
TranscriptomicsRNA-seq of poly-A enriched total RNA of brain, liver, kidney, heart and skeletal muscle samples from pufferfish
This experiment contains the Tetraodon nigroviridis subset of data from the experiment E-GEOD-41338 (http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-41338/). mRNA profiles of several organs (brain, liver, kidney, heart, skeletal muscle) in multiple vertebrate species (mouse, chicken, lizard, fr...
ORGANISM(S): Tetraodon nigroviridis 
2012-12-22 | E-MTAB-3728 | biostudies-arrayexpress
TranscriptomicsRNA-seq of poly-A enriched total RNA of brain, liver, kidney, heart and skeletal muscle samples from 5 vertebrate species: mouse, chicken, frog, lizard and pufferfish
How species with similar repertoires of protein coding genes differ so dramatically at the phenotypic level is poorly understood. From comparing the transcriptomes of multiple organs from vertebrate species spanning ~350 million years of evolution, we observe significant differences in alternative s...
ORGANISM(S): Mus musculus 
2012-12-22 | E-GEOD-41338 | biostudies-arrayexpress
ProteomicsProteogenomics of High hyperdiploid childhood acute lymphoblastic leukemia
Proteogenomic analysis and genomic profiling, RNA-sequencing, and mass spectrometry-based analysis of High hyperdiploid childhood acute lymphoblastic leukemia.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2020-01-29 | MSV000084862 | MassIVE
TranscriptomicsTranscriptional profiling of wild_type and K14MycER mice treated with tamoxifen in a time-course (0, 1, 2, 4 and 6 days)
Expression analysis of a c-Myc knockin effects on gene expression in adult mouse skin. We used an inducible system to overexpress c-Myc specifically in adult mouse K14 positive keratinocytes and analysed the resulting changes in gene expression by means of microarrays.
ORGANISM(S): Mus musculus 
2011-10-26 | E-MTAB-553 | biostudies-arrayexpress
TranscriptomicsRNA-Seq of six mammals
Homologous vertebrate tissues express a highly conserved set of transcribed genes; paradoxically, expression of tRNAs that are required to translate mRNAs into proteins have been reported to be divergent. To resolve this paradox, we mapped the genome-wide occupancy of pol III in primary tissues iso...
ORGANISM(S): Mus musculus 
2011-07-29 | E-MTAB-424 | biostudies-arrayexpress
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