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TranscriptomicsParedes_IPATIMUP_Comparison of cell lines derived from BT-20 cells using siRNA to silence E-cadherin and P-cadherin
Gene expression of four cell lines derived from BT-20 cells, namely, BT20 siCtr (E+/P+), BT20 siPcad (E+/P-), BT20 siEcad (E-/P+), and BT20 siEPcad (E-/P-) was compared using Agilent Human GE 4x44k v2 Microarrays and the Agilent One-Color Microarray-Based Gene Expression Analysis protocol (Quick Amp...
ORGANISM(S): Homo sapiens 
2011-10-01 | E-MEXP-3329 | biostudies-arrayexpress
TranscriptomicsChromatin Immunoprecipitation Analysis of Aryl Hydrocarbon Receptor Binding in a Mouse B-cell Line (CH12.LX) Activated with Lipopolysaccharide and Treated with 2,3,7,8-Tetrachlorodibenzo-p-dioxin
The aryl hydrocarbon receptor (AHR) agonist 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) alters differentiation of B cells and suppresses antibody production. The objectives of this study was to use a combination of whole genome, microarray-based chromatin immunoprecipitation (ChIP-on-chip) and time ...
ORGANISM(S): Mus musculus 
2010-08-31 | E-GEOD-23708 | biostudies-arrayexpress
TranscriptomicsEffect of germline ablation in the nematode P. pacificus
Transcriptional profiling of germline-ablated P. pacificus worms versus un-ablated wild-type controls. Food source E. coli OP50 for both conditions. The goal was to identify genes that regulate the enhanced longevity observed in germline-deficient animals. One-condition experiments. Germline ablated...
ORGANISM(S): Pristionchus pacificus 
2012-04-17 | E-GEOD-37331 | biostudies-arrayexpress
TranscriptomicsImmune reposne of germline-ablated P. pacificus exposed to S. marcescens
Transcriptional profiling of germline-ablated P. pacificus worms exposed to S. marcescens for 8 hours versus germline-ablated P. pacificus exposed to the control E. coli OP50. First goal was to identify genes that are involved in immune response of germline-ablated P. pacificus when exposed to S. ma...
ORGANISM(S): Pristionchus pacificus 
2012-04-17 | E-GEOD-37337 | biostudies-arrayexpress
TranscriptomicsA novel extracytoplasmic function (ECF) sigma factor regulates virulence in Pseudomonas aeruginosa
Next to the two-component and quorum sensing systems, cell-surface signaling (CSS) has been recently identified as an important regulatory system in Pseudomonas aeruginosa. CSS senses signals from outside the cell and transmits them into the cytoplasm. It consists of a TonB-dependent outer membrane ...
ORGANISM(S): Pseudomonas aeruginosa 
2009-04-21 | E-GEOD-15697 | biostudies-arrayexpress
TranscriptomicsP. pacificus young adults: Exposed to Serratia marcescens versus exposed to E. coli OP50 : 4 hours
Transcriptional profiling of P. pacificus young adult worms exposed to pathogen Serratia marcescens for 4 hours versus age-matched worms exposed to control lab food E. coli OP50. The goal was to identify genes regulated in response to pathogen. The broader goal of study was to study evolution of pat...
ORGANISM(S): Pristionchus pacificus 
2012-03-21 | E-GEOD-36521 | biostudies-arrayexpress
TranscriptomicsP. pacificus young adults: Exposed to Xenorhabdus nematophila versus exposed to E. coli OP50 : 4 hours
Transcriptional profiling of P. pacificus young adult worms exposed to pathogen Xenorhabdus nematophila for 4 hours versus age-matched worms exposed to control lab food E. coli OP50. The goal was to identify genes regulated in response to pathogen. The broader goal of study was to study evolution of...
ORGANISM(S): Pristionchus pacificus 
2012-03-21 | E-GEOD-36523 | biostudies-arrayexpress
TranscriptomicsP. pacificus and C. elegans exposed to various pathogens
This SuperSeries is composed of the following subset Series: GSE36413 : C. elegans young adults : Exposed to Bacillus thuringiensis DB27 vs. E. coli OP50 exposure; 4hours GSE36493: C. elegans young adults: Exposed to Staphylococcus aureus versus exposed to E. coli OP50 : 4 hours GSE36499: C. elegan...
ORGANISM(S): Pristionchus pacificus 
2012-03-20 | E-GEOD-36636 | biostudies-arrayexpress
TranscriptomicsP. pacificus young adults: Exposed to Staphylococcus aureus versus exposed to E. coli OP50 : 4 hours
Transcriptional profiling of P. pacificus young adult worms exposed to pathogen Staphylococcus aureus for 4 hours versus age-matched worms exposed to control lab food E. coli OP50. The goal was to identify genes regulated in response to pathogen. The broader goal of study was to study evolution of p...
ORGANISM(S): Pristionchus pacificus 
2012-03-21 | E-GEOD-36519 | biostudies-arrayexpress
TranscriptomicsP. pacificus young adults: Exposed to Bacillus thuringiensis DB27 versus exposed to E. coli OP50 : 4 hours
Transcriptional profiling of P. pacificus young adult worms exposed to pathogen Xenorhabdus nematophila for 4 hours versus age-matched worms exposed to control lab food E. coli OP50. The goal was to identify genes regulated in response to pathogen. The broader goal of study was to study evolution of...
ORGANISM(S): Pristionchus pacificus 
2012-03-21 | E-GEOD-36517 | biostudies-arrayexpress
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