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TranscriptomicsGene expression of E. coli MG1655 at attachment, colony formation and maturation during biofilm formation
Gene expression changes during biofilm formation processes were investigated. The gene expression was compared at attachment, colony formation and maturation during biofilm formation. At the same time, the gene expressions were also compared with exponential phase and stationary phase in planktonic ...
ORGANISM(S): Escherichia coli 
2009-04-01 | E-GEOD-13418 | biostudies-arrayexpress
TranscriptomicsEffect of chlorination on toxicity of wastewater effluents from different treatment systems to HepG2 human hepatoma cells
Effect of chlorination on the toxicity of wastewater effluents treated by activated sludge (AS) and submerged membrane bioreactor (S-MBRB) systems to HepG2 human hepatoblastoma cells was investigated. In addition to cytotoxicity assay, the DNA microarray-based transcriptome analysis was performed to...
ORGANISM(S): Homo sapiens 
2013-06-21 | E-GEOD-48157 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of pNCF (non-conjugative factor of F plasmid) carrying E.coli biofilm
Three E.coli affymetrix antisense arrays were used to examine the global gene expression of pNCF carrying E.coli biofilm. The pNCF is the derivative of only 65 kb non-conjugative factor of F plasmid. It was introduced to E.coli MG1655 strains before prepare the biofilm samples. The biofilms were cul...
ORGANISM(S): Escherichia coli 
2007-09-01 | E-MEXP-1145 | biostudies-arrayexpress
no omics definedTranscription profiling of E. coli biofilm to assess the global gene impact of a natural F conjugative plasmid-carrying E.coli biofilm
we examined the three different mature biofilms and searched the genes which promoted the rapid biofilm formation when their population hosing the plasmids. We investigate the global transcriptional differences between the non-conjugative or conjugative plasmid-carrying and plasmid-free strains.
ORGANISM(S): Escherichia coli 
2007-05-15 | E-MEXP-953 | biostudies-arrayexpress
TranscriptomicsGene expression of E. coli MG1655 pOX38Km at the outside and inside of biofilms
Gene expression changes between outside and inside of biofilms were investigated. The gene expression was compared between the outside and inside of the biofilms. At the same time, the gene expressions were also compared with exponential phase and stationary phase in planktonic cells. The gene expre...
ORGANISM(S): Escherichia coli 
2009-04-01 | E-GEOD-13589 | biostudies-arrayexpress
TranscriptomicsExpression Data from DMSO or SRPIN803 treated ARPE-19 cells
We used microarrays to evaluate the effect of SRPIN803 on gene expression in ARPE-19 cells. ARPE-19 cells were treated with SRPIN803 (10 uM) or the negative control (0.1% DMSO) for 4 hours for Total RNA isolation and hybridization on Microarray.
ORGANISM(S): Homo sapiens 
2015-06-17 | E-GEOD-62947 | biostudies-arrayexpress
UnknownComparative analysis of necrotizing enterocolitis in preterm infants born in Japan and born to mothers of Japanese ethnicity in California.
Not available
S-EPMC11929812 | biostudies-literature
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