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MetabolomicsComposition of the marine exometabolome is more stable than the functionally redundant microbial community in the oligotrophic North Atlantic

Untargeted features from the Bermuda Atlantic Time-series Study (BATS) site collected during the time period spanning 2016 to 2019. Metabolites were sampled from surface seawater to 1000 m deep and throughout the year. Dissolved organic matter extracts were analyzed in positive and negative ion m...

2024-02-28 | MTBLS5228 | MetaboLights
TranscriptomicsActivation of 3, 4-dimethylphenol dimer production from marine Streptomyces sp. FJNU027 under oligotrophic condition
Activating the cryptic secondary metabolic gene clusters is a vital research field in Streptomyces. The marine Streptomyces sp. FJNU027 strain which could produce tirandamycins was cultured in the oligotrophic medium. Compared with normal medium, a differential product in oligotrophic culture was fo...
ORGANISM(S): Streptomyces seoulensis 
2025-12-10 | GSE278152 | GEO
ProteomicsHumin oxidation is a Survival Strategy of Organohalide-respiring Bacteria in Oligotrophic Environments
This project investigates the survival strategies of organohalide-respiring bacteria in oligotrophic environments, focusing on their mechanisms of energy acquisition through humins oxidation. The research aims to uncover the metabolic adaptability of bacteria in resource-limited settings, providing ...
ORGANISM(S): Pseudomonas aeruginosa PAO579 
2025-10-13 | PXD061683 | Pride
Energy acquisition Humin oxidation Respiratory dehalogenation 
GenomicsOligotrophic lakes
Oligotrophic lakes Raw sequence reads
PRJNA1224988 | ENA
GenomicsOligotrophic freshwater systems
Oligotrophic freshwater systems Raw sequence reads
PRJNA1205671 | ENA
GenomicsBacterial communities of oligotrophic groundwater
Differential contributions of nitrifying microorganisms to nitrification in oligotrophic groundwater from the Hainich Critical Zone Exploratory
PRJEB63087 | ENA
GenomicsAmmonia oxidizing communites of oligotrophic groundwater
Differential contributions of nitrifying microorganisms to nitrification in oligotrophic groundwater from the Hainich Critical Zone Exploratory
PRJEB57321 | ENA
GenomicsMicrobial activity and subsistence in oligotrophic lake sediments
Microbial activity and subsistence in oligotrophic lake sediments
PRJEB63311 | ENA
GenomicsActivation of 3, 4-dimethylphenol dimer production from marine Streptomyces sp. FJNU027 under oligotrophic condition
Activation of 3, 4-dimethylphenol dimer production from marine Streptomyces sp. FJNU027 under oligotrophic condition
PRJNA1165767 | ENA
UnknownHumin oxidation drives microbial dehalogenation in oligotrophic environments.
Not available
S-EPMC12503164 | biostudies-literature
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