Oomycete - OmicsDI

Show results for

Unknown (1048)
Genomics (312)
Transcriptomics (99)
Proteomics (38)
Metabolomics (6)
Methylation profiling (1)
Other (1)

Organisms

Arabidopsis thaliana (26)
Glycine max (10)
Phytophthora infestans (9)
Vitis vinifera (9)
Capsicum annuum (8)
Phytophthora sojae (5)
Medicago truncatula (4)
Solanum tuberosum (4)
Solanum lycopersicum (4)
Caenorhabditis elegans (3)
Saccharomyces cerevisiae (2)
Phytophthora phaseoli (2)
Vitis rotundifolia (2)
Zea mays (2)
Oryza sativa Japonica Group (2)
Persea americana (2)
Phytophthora nicotianae (2)
Pythium myriotylum (2)
Oryza sativa (2)
Vitis riparia (1)
Phytophthora nicotianae INRA-310 (1)
Aphanomyces euteiches (1)
Pyropia tenera (1)
Sinorhizobium meliloti (1)
Pseudomonas [fluorescens] SBW25 (1)
Albugo laibachii (1)
Moesziomyces sp. GD-2020a (1)
Theobroma cacao (1)
Pseudomonas protegens (1)
Zingiber officinale (1)

Organisms

Arabidopsis thaliana (16)
Glycine max (8)
Phytophthora infestans (6)
Plasmopara halstedii (5)
Phytophthora capsici (5)
Pythium insidiosum (5)
Vitis vinifera (5)
Solanum lycopersicum (4)
Pythium oligandrum (3)
Phytophthora nicotianae (3)
Phytophthora cactorum (3)
Caenorhabditis elegans (3)
Aphanomyces euteiches (2)
Phytophthora colocasiae (2)
Phytophthora infestans T30-4 (2)
Persea americana (2)
Oomycota sp. (2)
Phytophthora meadii (2)
plant metagenome (2)
Solanum tuberosum (2)
soil metagenome (2)
Cellulomonas sp. ICMP 17802 (1)
Phytophthora medicaginis (1)
Streptomyces sp. 11x1 (1)
Phytophthora vignae (1)
Salisapilia sapeloensis (1)
Phytophthora cinnamomi var. cinnamomi (1)
Aphanomyces stellatus (1)
Phytophthora phaseoli (1)
[Pythium] brassicae (nom. inval.) (1)

Repository

ENA (309)
geo (66)
biostudies-arrayexpress (38)
pride (33)
MetaboLights (5)
MassIVE (3)
GNPS (1)
iProX (1)
jPOST (1)

Tissue

Leaf (10)
Plant cell (7)
Cyst (2)
Mycelium (2)
Seedling (2)
Haustorium (1)

Disease

Disease free (1)

Technology Type

Mass Spectrometry (33)
Shotgun proteomics (22)
Bottom-up proteomics (6)
Mass spectrometry (5)
Gel-based experiment (3)
Affinity purification coupled with mass spectrometry proteomics (3)
SWATH MS (2)
Data-dependent acquisition (1)

Instrument Platform

Usegalaxy.org (2)
Illumina HiSeq 2500 (2)
Q Exactive Plus (2)
Gas Chromatography MS - positive (2)
MacBook Air (1)
418 [Affymetrix] (1)
Illumina MiSeq (1)
NextSeq 500 (1)
Q-Exactive (Thermo Fisher) (1)
Q Exactive (1)
Direct infusion MS - negative (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Diode array detection MS - - - micrOTOF-Q II ESI-Qq-TOF (Bruker) (1)
Liquid Chromatography MS - - - micrOTOF-Q II ESI-Qq-TOF (Bruker) (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2023 (15)
2011 (13)
2014 (11)
2021 (10)
2010 (9)
2024 (9)
2022 (9)
2020 (8)
2019 (8)
2018 (8)
2025 (8)
2015 (7)
2017 (6)
2026 (5)
2009 (5)
2013 (4)
2012 (4)
2007 (4)
2016 (3)
2008 (2)

CHEBI ID

CHEBI:16196 (3)
CHEBI:15756 (3)
CHEBI:2760 (2)
CHEBI:50464 (2)
CHEBI:6053 (2)
CHEBI:2899 (2)
CHEBI:8198 (2)
CHEBI:39932 (2)
CHEBI:31832 (2)
CHEBI:33830 (2)
CHEBI:38747 (2)
CHEBI:17814 (2)
CHEBI:50202 (2)
CHEBI:18305 (2)
CHEBI:42255 (2)
CHEBI:36108 (2)
CHEBI:17393 (2)
CHEBI:28233 (2)
CHEBI:69187 (2)
CHEBI:18186 (2)
CHEBI:22652 (2)
CHEBI:9300 (2)
CHEBI:28875 (2)
CHEBI:28842 (2)
CHEBI:15428 (2)
CHEBI:15741 (2)
CHEBI:34698 (2)
CHEBI:16335 (2)
CHEBI:16734 (2)
CHEBI:28837 (2)

Metabolite Name

Antiarol (2)
Galacturonic acid (2)
Oleic acid (2)
Palmitic acid (2)
Glycine (2)
Succinic acid (2)
Boivinide A (1)
K-Strophanthin-beta (1)
Quercetin 3-O-rhamnoside 7-O-glucoside (1)
Isovitexin 2''-O-beta-D-glucoside (1)
Cascaroside B (1)
Glucofrangulin A (1)
Aloinoside A (1)
Cascaroside C (1)
Cascaroside D (1)
Glucofrangulin B (1)
2-O-[6-O-Octanoyl-alpha-D-glucopyranosyl-(1->6)-alpha-D-glucopyranosyl]-D-glycerate (1)
Panogenin-3-o-alpha-L-rhamnopyranoside (1)
Aspecioside (1)
Carminomycin (1)
Soularubinone (1)
11-o-Galloylbergenin (1)
4-o-Galloylbergenin (1)
4'-O-Demethylsordarin (1)
1-(2-Hydroxy-3,4,5,6-tetramethoxyphenyl)-3-(2,3,4,6-tetramethoxyphenyl)-2-propen-1-one (1)
6-Methoxyluteolin 7-rhamnoside (1)
17beta-Estradiol 17-(beta-D-glucuronide) (1)
Jodrellin A (1)
Kaempferol 3-O-beta-D-galactoside (1)
Clavulone IV (1)

First Public Date

2018 (39)
2014 (32)
2026 (26)
2025 (26)
2024 (26)
2023 (25)
2019 (24)
2017 (21)
2021 (20)
2020 (19)
2013 (16)
2022 (13)
2016 (9)
2015 (9)
2010 (2)
2012 (1)
2011 (1)

Classification

bacteria (3)

Modification

Not available (1)

Study type

Transcription profiling by array (27)
RNA-seq of coding RNA (7)
RNA-seq of non coding RNA (3)
Plant - One-color microarray (1)

Release Date

2021 (118)
2020 (107)
2023 (95)
2022 (92)
2024 (85)
2019 (72)
2018 (72)
2016 (64)
2017 (56)
2025 (52)
2015 (49)
2014 (43)
2011 (41)
2013 (26)
2012 (25)
2010 (21)
2009 (21)
2026 (13)
2008 (9)
2007 (9)
2003 (5)
2006 (3)
2005 (3)
2004 (2)
2002 (1)
2001 (1)
2000 (1)

Lab affiliation

Jiangsu Academy of Agricultural Sciences (3)
CEA-Marcoule, ProGenoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France (2)
Hans Merensky Chair in Avocado Research, Department of Biochemistry, Genetics and Microbiology, Faculty of Natural and Agricultural Sciences, Forestry and Agricultural Biotechnology Institute, University of Pretoria, Pretoria 0028, South Africa (1)
Hu Bei province,enshi Acandemy of Agricutural sciences (1)
UPF/CRG Proteomics Unit (1)
College of Plant Protection, China Agricultural University, Beijing 100193, China (1)
Institute of Vegetable, Zhejiang Academy of Agriculture Sciences, Hangzhou, China (1)
Division of Glycoscience, Department of Chemistry, School of Engineering Sciences in Chemistry, Biotechnology and Health AlbaNova University Center, KTH Royal Institute of Technology (1)
State Key Laboratory of Crop Stress Biology for Arid Areas, Key Laboratory of Plant Protection Resources and Pest Management of Ministry of Education, College of Plant Protection, Northwest A&F University, Yangling 712100, Shaanxi, China (1)
Division of Plant Sciences, University of Dundee (at the James HuttonInstitute), Errol Road, Invergowrie, Dundee DD2 5DA, UK (1)
Division of Plant Sciences, University of Dundee at JHI, Scotland, UK (1)
Department of Plant Pathology, Nanjing Agricultural University, Nanjing 210095, China (1)
LIST-ERIN-BEAP, Belvaux, Luxembourg (1)
The Scottish Accociation for Marine Science Scottish Marine Intsitute Department of Microbiology and Molecular Biology Oban, PA37 1QA United Kingdom (1)
Sainsbury Laboratory Cambridge University (SLCU) (1)
Department of Plant Protection Biology (1)
Proteomics group, The Sainsbury Laboratory, Colney lane, Norwich, NR4 7UH, United Kingdom (1)
Rajiv Gandhi Center for Biotechnology, Thiruvanthapuram, India (1)
Center for Electronic, Optoelectronic and Telecommunications (CEOT), Universidade do Algarve, Faro, Portugal (1)
Department of Microbial Physiology and Molecular Biology, Institute of Microbiology, University of Greifswald, Greifswald, Germany (1)
Rajiv Gandhi Center for Biotechnology (1)
Division of Glycoscience, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm, SE-10691, Sweden (1)
Mahidol university (1)
Department of Agronomy Iowa State University (1)
Division of Glycoscience, Royal Institute of Technology (KTH), AlbaNova University Centre, Stockholm, SE-10691, Sweden; (1)
Department of Biology, Washington University in St. Louis, St. Louis, MO, USA (1)
Ocean University of China (1)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technische Universität München (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
University of Dundee (1)

Previous page
1 / 151
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 151
Next page

Sort by:

Relevance

Page size

2E,4E-decadienoic acid, a novel anti-oomycete agent from co-culture of Bacillus subtilis and Trichoderma asperellum

Phytophthora nicotianae is an oomycete pathogen of global significance threatening many important crops. It is mainly controlled by chemosynthetic fungicides, which endangers ecosystem and human health; thus, there is an urgent need to explore alternatives for these fungicides. In this s...

2022-08-01 | MTBLS5405 | MetaboLights

Metabolic profiling with UPLC-MS orbitrap of diatoms Coscinodiscus granii infected with parasitic oomycete Lagenisma coscinodisci

The bloom-forming diatoms Coscinodiscus granii were cultivated in a non-contact dual cultivation apparatus. This device allows the exchange of exudates, without transfer of any microorganisms, allowing the investigation of both endo- and exo-metabolome. The treatment consisted in infecting diatom ce...

2019-09-23 | MTBLS775 | MetaboLights

A molecular insight into algal-oomycete warfare: cDNA analysis of Ectocarpus siliculosus infected with the basal oomycete Eurychasma dicksonii.

Not available

S-EPMC3174193 | biostudies-literature

Assessment of oomycete communities

Assessment of oomycete communities Raw sequence reads

PRJNA1191002 | ENA

Oomycete

Oomycete Raw sequence reads

PRJNA1228585 | ENA

Uptake of oomycete RXLR effectors into host cells by clathrin-mediated endocytosis

Filamentous (oomycete and fungal) plant pathogens can deliver cytoplasmic effector proteins into host cells to facilitate disease. How RXLR effectors from the potato late blight pathogen Phytophthora infestans enter host cells is unknown. One possible route involves clathrin-mediated endocytosis (CM...

ORGANISM(S): Phytophthora infestans T30-4 Nicotiana benthamiana

2023-07-20 | PXD040285 | Pride