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TranscriptomicsGlobal analysis of Caenorhabditis elegans operons
Caenorhabditis elegans and its relatives are unique among animals, possibly even among eukaryotes, in having operons. In these regulated multigene transcription units, a polycistronic pre-mRNA is processed to monocistronic mRNAs by 3' end formation and trans-splicing utilizing a special snRNP, the ...
ORGANISM(S): Caenorhabditis elegans 
2005-07-22 | E-GEOD-2975 | biostudies-arrayexpress
ProteomicsMultifaceted stoichiometry control of bacterial operons revealed by data-independent acquisition mass spectrometry
Genes clustered into polycistronic operons was thought a characteristic of bacteria and many other species. More than half protein-coding genes are organized in polycistronic operons composed of two or more than ten genes in bacterial genomes. Although the structure of operons have been studied prec...
ORGANISM(S): Escherichia coli 
2019-11-12 | PXD010126 | Pride
Operons Mass spectrometry Faceted stoichiometry control 
TranscriptomicsTranscription profiling of C. elegans operons
Caenorhabditis elegans and its relatives are unique among animals, possibly even among eukaryotes, in having operons1. In these regulated multigene transcription units, a polycistronic pre-mRNA is processed to monocistronic mRNAs by 3' end formation and trans-splicing utilizing a special snRNP, the...
ORGANISM(S): Caenorhabditis elegans 
2005-07-13 | E-SMDB-1388 | biostudies-arrayexpress
TranscriptomicsPrevalence of transcription promoters within archaeal operons and coding sequences
This SuperSeries is composed of the following subset Series: GSE12923: Halobacterium salinarum NRC-1 growth curve, tiling arrays. GSE12977: Halobacterium salinarum NRC-1 growth curve GSE13108: Halobacterium salinarum NRC-1 conditional ChIP-chip for transcription initiation factor IIB 4 (TFBd) GSE704...
ORGANISM(S): Halobacterium sp. NRC-1 
2010-05-17 | E-GEOD-13150 | biostudies-arrayexpress
GenomicsThe Complex Transcriptional Architecture of Magnetosome Operons in Magnetospirillum gryphiswaldense
The Complex Transcriptional Architecture of Magnetosome Operons in Magnetospirillum gryphiswaldense
PRJNA714866 | ENA
TranscriptomicsGenome-wide map of spliced-leader-led trans-splice sites in Oikopleura dioica
Polycistronic mRNAs transcribed from operons are resolved via the trans-splicing of a spliced leader (SL) RNA. The SL is also frequently trans-spliced to monocistronic transcripts. Using a modified cap analysis of gene expression (CAGE) protocol we mapped sites of SL trans-splicing genome-wide in th...
ORGANISM(S): Oikopleura dioica 
2015-01-26 | E-GEOD-50849 | biostudies-arrayexpress
TranscriptomicsHigh-resolution genome-wide transcriptomics analysis of O. dioica during recovery from growth arrest
Polycistronic mRNAs transcribed from operons are resolved via the trans-splicing of a spliced leader (SL) RNA. The SL is also frequently trans-spliced to monocistronic transcripts. Using a modified cap analysis of gene expression (CAGE) protocol we mapped sites of SL trans-splicing genome-wide in th...
ORGANISM(S): Oikopleura dioica 
2015-01-26 | E-GEOD-50848 | biostudies-arrayexpress
GenomicsMultifaceted stoichiometry control of bacterial operons revealed by data-independent acquisition mass spectrometry
Multifaceted stoichiometry control of bacterial operons revealed by data-independent acquisition mass spectrometry
PRJNA507085 | ENA
TranscriptomicsTranscription profiling of E. coli wild type and Fur mutant strains ectopically expressing RyhB to investigate global iron use
RyhB is a non-coding RNA regulated by the Fur repressor. It has previously been shown to cause the rapid degradation of a number of mRNAs that encode proteins that utilize iron. Here we examine the effect of ectopic RyhB production on global gene expression by microarray analysis. Many of the pre...
ORGANISM(S): Escherichia coli 
2007-09-21 | E-GEOD-3105 | biostudies-arrayexpress
TranscriptomicsGlobal analysis of Caenorhabditis elegans operons
Caenorhabditis elegans and its relatives are unique among animals, possibly even among eukaryotes, in having operons. In these regulated multigene transcription units, a polycistronic pre-mRNA is processed to monocistronic mRNAs by 3' end formation and trans-splicing utilizing a special snRNP, the S...
ORGANISM(S): Caenorhabditis elegans 
2005-07-22 | GSE2975 | GEO
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