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TranscriptomicsSingle feature polymorphism array 16K Unigenes: marker discovery in melon
One of the methods used to search for molecular markers is DNA hybridization to microarrays. Microarray hybridization of DNA from different individuals can reveal differences between them (single-feature polymorphisms (SFPs)). These SFPs can be used as markers for breeding purposes, or they can be c...
ORGANISM(S): Cucumis melo subsp. melo 
2010-08-01 | E-GEOD-17673 | biostudies-arrayexpress
TranscriptomicsGene expression profiling of grape-bud response to two alternative dormancy-release stimuli.
A grape-bud-oriented genomic platform was produced for a large-scale comparative analysis of bud responses to two stimuli of grape-bud dormancy release, hydrogen cyanamide (HC) and heat shock (HS). The results suggested considerable similarity in bud response to the stimuli, both in the repertoire o...
ORGANISM(S): Vitis vinifera 
2010-05-19 | E-GEOD-16173 | biostudies-arrayexpress
UnknownGenetic diversity of avocado (Persea americana Mill.) germplasm using pooled sequencing.
Not available
S-EPMC6521498 | biostudies-literature
UnknownThe pomegranate (Punica granatum L. cv. 'Wonderful') genome and P. protopunica shed light on pomegranate domestication. Is Daru a wild stock?
Not available
S-EPMC12535167 | biostudies-literature
TranscriptomicsMicroarray analysis of juvenile and mature cuttings of Eucalyptus grandis revealed developmental regulation of nitrate reductase which potentially influences nitric oxide production and adventitious root formation
The loss of rooting capability following the transition from the juvenile to the mature phase is a known phenomenon in woody plant development. Eucalyptus grandis was used here as a model system to study the differences in gene expression between juvenile and mature cuttings. RNA was prepared from ...
ORGANISM(S): Eucalyptus grandis 
2012-10-16 | E-GEOD-36317 | biostudies-arrayexpress
TranscriptomicsGenome-wide midrange transcription profiles reveal expression level relationships in human tissue specification - GeneNote
PolyA+ RNA samples from the twelve healthy human tissues were purchased from Clontech (Palo Alto, CA). Each RNA sample is typically composed of a pool of 10-25 individuals. The expression intensity of mRNA was assayed across five microarrays (Affymetrix GeneChips U95A–E). Please note GeneNote is now...
ORGANISM(S): Homo sapiens 
2003-11-19 | E-GEOD-803 | biostudies-arrayexpress
UnknownMango (Mangifera indica L.) germplasm diversity based on single nucleotide polymorphisms derived from the transcriptome.
Not available
S-EPMC4647706 | biostudies-literature
TranscriptomicsProfiling gene expression during root induction in juvenile and mature cuttings of Eucalyptus grandis revealed developmental and auxin dependent regulation of the microtubule system
Rooting capability is one of the economically traits lost during the juvenile to mature phase change in woody plants. A comprehensive microarray analysis was performed to compare the profiles of gene expression in juvenile and mature cuttings from E. grandis, either auxin treated or untreated on day...
ORGANISM(S): Eucalyptus grandis 
2015-05-01 | E-GEOD-57375 | biostudies-arrayexpress
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