Optical mapping

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CHEBI ID

CHEBI:9331 (1)
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CHEBI:36796 (1)
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Metabolite Name

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Lab affiliation

1Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China. 2Analytical Instrumentation Center, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China. 3Center for Quantitative Biology, PKU-Tsinghua Center for Life Sciences, Academy for Advanced Interdisciplinary Studies, Peking University, Beijing 100871, China (1)
Auburn University, Alabama (1)
Beijing National Laboratory for Molecular Sciences, College of Chemistry and Molecular Engineering, Peking University, Beijing, China (1)
CR Université Grenoble Alpes, Institute for Advanced Biosciences, Inserm U1209, CNRS UMR 5309, Grenoble, France (1)
Cancer and Immunology Research Center, National Yang Ming Chiao Tung University (1)
College of Life Sciences, Fujian Agriculture and Forestry University (1)
Department of Biology, Maynooth University, Maynooth, Co. Kildare, Ireland (1)
Department of Chemistry, Stanford University (1)
Dept. of Radiation Oncology, The University of Michigan Medical School, Medical Science Building I, Ann Arbor, MI 48109 (1)
Dörte Becher Department of Microbial Proteomics, Institute for Microbiology, Ernst-Moritz-Arndt-University Greifswald, Friedrich-Ludwig-Jahnstraße 15a, 17489 Greifswald, Germany (1)
Emmy-Noether Research Group Cellular Proteomics and Metabolic Signaling Institute for Diabetes and Obesity Helmholtz Diabetes Center - Munich Germany (1)
Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China. (1)
Institute of Physiology II Universität Freiburg Germany (1)
Michigan State University (1)
Research Unit "Functional Proteomics and Metabolic Pathways", Institute of Pathology, Medical University of Graz, Stiftingtalstrasse 24, 8010 Graz, Austria; Austrian Center of Industrial Biotechnology (ACIB), Petersgasse 14, 8010 Graz, Austria, Omics Center Graz, Austria (1)
Sichuan University (1)
Structural Studies Division MRC Laboratory of Molecular Biology Francis Crick Avenue Cambridge CB2 0QH, UK (1)

Location

France (1)

Keyword

Nflammatory bowel diseases (IBD) (1)
Familial adenomatous polyposis (FAP) (1)

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Optical Genome Mapping

Bionano Genomics Optical Genome Mapping Dataset as part of HGSVC3

PRJEB77842 | ENA

Optical mapping data for 16 cattle

Bionano optical mapping data for 16 cattle

PRJEB52551 | ENA

Musa acuminata subsp. banksii, genomic and optical mapping data.

PRJEB71827 | ENA

N'Dama cattle Bionano Saphyr optical mapping

Project containing 2x N'Dama cattle (Bos taurus) 100X Bionano Saphyr optical mapping reads

PRJEB47998 | ENA

Epigenetic optical mapping of 5-hydroxymethylcytosine in nanochannel arrays

PRJNA475101 | ENA

Safflower A2 BioNano Optical Mapping data

Safflower A2 Optical Mapping data produced by BioNano Genomics Irys System

PRJEB74644 | ENA

Epigenetic optical mapping of 5-hydroxymethylcytosine in nanochannel arrays

We present a long-read, single-molecule mapping technology that generates hybrid genetic/epigenetic profiles of native chromosomal DNA. The genome-wide distribution of 5-hmC in human peripheral blood cells correlates well with 5-hmC DNA immunoprecipitation (hMeDIP) sequencing. However, the long sing...

ORGANISM(S): Homo sapiens

2018-06-08 | GSE115454 | GEO

Transcriptome sequencing of Capra hircus for different tissues.

The domestic goat, Capra hircus (2n=60), is one of the most important domestic livestock species in the world. Here we report its high quality reference genome generated by combining Illumina short reads sequencing and a new automated and high throughput whole genome mapping system based on the opti...

ORGANISM(S): Capra hircus

2012-12-23 | E-GEOD-37456 | biostudies-arrayexpress

Acinetobacter baumannii

Acinetobacter baumannii genome sequencing and optical mapping

PRJNA540464 | ENA

9f28ba52-b3d6-4dbe-8d3a-6985af609115 - samples

Bionano DLS optical mapping data for individual HV31 generated using DNA from peripheral blood mononuclear cells, to a molecule depth of ~153ÃƒÂ—. Optical mapping was performed at the Weatherall Institute of Molecular Medicine using the Bionano Saphyr platform.

EGAD00001007049 | EGA

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2199 Results

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