Oral surgery - OmicsDI

Show results for

Unknown (14767)
Transcriptomics (816)
Genomics (266)
Clinical (116)
Proteomics (24)
Genomic (20)
Metabolomics (16)
Models (1)
Other (1)

Organisms

Homo sapiens (299)
Mus musculus (240)
Drosophila melanogaster (38)
Arabidopsis thaliana (27)
Rattus norvegicus (20)
Saccharomyces cerevisiae (16)
Danio rerio (14)
Sus scrofa (12)
Caenorhabditis elegans (7)
Gallus gallus (7)
Bos taurus (6)
Zea mays (4)
Campylobacter jejuni (4)
Solanum lycopersicum (4)
Macaca mulatta (3)
Oryza sativa Japonica Group (3)
Boehmeria nivea (2)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (2)
Hevea brasiliensis (2)
environmental samples (2)
Thermus thermophilus HB8 (2)
Brugia pahangi (2)
Pan troglodytes (2)
Drosophila simulans (2)
Xenopus laevis (2)
Schizosaccharomyces pombe (2)
Vitis vinifera (2)
Mycobacterium tuberculosis (2)
Oncorhynchus mykiss (2)
Canis lupus familiaris (2)

Organisms

Homo sapiens (115)
Mus musculus (48)
Rattus norvegicus (10)
human oral metagenome (5)
Canis lupus familiaris (3)
Mammalia (2)
human gut metagenome (2)
Human alphaherpesvirus 1 strain RH2 (1)
Streptococcus salivarius SK126 (1)
Porphyromonas gingivalis ATCC 33277 (1)
organismal metagenomes (1)
human saliva metagenome (1)
Oryctolagus cuniculus (1)
Ambystoma mexicanum (1)
Pseudomonas aeruginosa PAO1 (1)
Bacteria (1)

Repository

biostudies-arrayexpress (816)
ENA (244)
geo (21)
dbGaP (20)
MetaboLights (16)
pride (16)
MassIVE (6)
EGA (3)
BioModels (1)
NODE (1)

Tissue

Saliva (4)
Blood plasma (2)
Cell culture (2)
Primary cell (2)
Subglottic samples of intubated (1)
Alveolar bone (1)
Bone (1)
Bone of jaw (1)
Craniofacial region (1)
Epithelial cell (1)
Fibroblast (1)
Heart (1)
Keratinocyte (1)
Periodontal ligament (1)
Salivary gland (1)
Skeletal muscle fiber (1)
Skin (1)
Tongue epithelium (1)

Disease

Colorectal Neoplasms (24)
Colorectal cancer (12)
Colorectal cancer (5)
Neoplasms (5)
Colorectal Cancer (4)
Bowel cancer (3)
Normal (2)
Head and neck squamous cell carcinoma (2)
Insulin Resistance (2)
Esophageal Neoplasms (2)
Colon cancer (2)
Infections (2)
Colonic Neoplasms (2)
XCGD (1)
Huntington's disease mouse model (1)
GIP-dependent Cushing's syndrome (1)
HPV positive (1)
Osteosarcoma subtype fibroblastic (1)
Glioblastoma (1)
Neuroblastoma (1)
Patients undergoing nausea and vomiting following elective colorectal resections (1)
Bowel cancers and other bowel diseases requiring surgical intervention. (1)
Colorectal Neoplasms. Colorectal Surgery. Perioperative Assistance (1)
Post operative ileus (1)
Small bowel resection (1)
Colorectal advanced mucosal neoplasia (1)
Advanced duodenal mucosal/submucosal neoplasia (1)
Major abdominal cancer surgery (1)
Rectal resection (1)
Pancreatic cancer (1)

Technology Type

Mass Spectrometry (16)
Mass spectrometry (8)
Shotgun proteomics (8)
NMR spectroscopy (4)
Mass spectrometry assay (4)
Bottom-up proteomics (4)
Top-down proteomics (2)
DiaPASEF (1)
MSE (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (6)
Illumina HiSeq 4000 (5)
NextSeq 500 (5)
Illumina NovaSeq 6000 (3)
Liquid Chromatography MS - (3)
NextSeq 2000 (2)
Bruker (2)
Nuclear Magnetic Resonance (NMR) - (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Ion Torrent Proton (1)
Illumina MiSeq (1)
NextSeq 550 (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap Elite (1)
Orbitrap Fusion Lumos (1)
Q Exactive (1)
Synapt G2 HDMS (1)
Thermo QExactive HF (1)
TimsTOF (1)
Flow injection analysis MS - positive (1)
Autoflex speed smartbeam (1)
Liquid Chromatography MS - negative - HILIC (1)
Liquid Chromatography MS - positive - HILIC (1)

Publication Date

2010 (128)
2015 (125)
2013 (124)
2012 (111)
2014 (106)
2011 (79)
2008 (34)
2016 (31)
2009 (27)
2007 (25)
2022 (20)
2025 (12)
2021 (8)
2026 (7)
2018 (6)
2024 (6)
2004 (5)
2023 (5)
2020 (5)
2005 (4)
2017 (3)
2019 (2)
2006 (1)
2003 (1)

UNIPROT ID/AC

P04275 (1)
P05155 (1)
P07093 (1)
P05546 (1)
P08697 (1)
P05121 (1)
P01009 (1)
P01023 (1)
P07204 (1)
P02671 (1)
P00748 (1)
P03951 (1)
P07225 (1)
P04070 (1)
P01008 (1)
P10646 (1)
P12259 (1)
P00451 (1)
P00740 (1)
P00742 (1)
P08709 (1)
P13726 (1)
P00734 (1)

CHEBI ID

CHEBI:15428 (4)
CHEBI:15366 (4)
CHEBI:78320 (4)
CHEBI:15688 (3)
CHEBI:30751 (3)
CHEBI:28044 (3)
CHEBI:27266 (3)
CHEBI:15891 (3)
CHEBI:32816 (3)
CHEBI:140765 (2)
CHEBI:4513 (2)
CHEBI:3451 (2)
CHEBI:137554 (2)
CHEBI:137551 (2)
CHEBI:137552 (2)
CHEBI:67066 (2)
CHEBI:67077 (2)
CHEBI:85568 (2)
CHEBI:85565 (2)
CHEBI:74472 (2)
CHEBI:74470 (2)
CHEBI:90000 (2)
CHEBI:72347 (2)
CHEBI:84326 (2)
CHEBI:3663 (2)
CHEBI:65172 (1)
CHEBI:68579 (1)
CHEBI:28304 (1)
CHEBI:16247 (1)
CHEBI:18059 (1)

Metabolite Name

Creatine (5)
Inosine (5)
Hypoxanthine (5)
Acetate (4)
Uracil (4)
Valine (4)
Citrulline (4)
Carnosine (4)
Kynurenic acid (4)
Ornithine (4)
Pipecolic acid (4)
Cytosine (4)
Adenine (4)
Asparaginyl-Proline (3)
Gamma-L-Glutamyl-L-pipecolic acid (3)
S-Adenosylmethionine (3)
1-Methylnicotinamide (3)
N1-Methyl-2-pyridone-5-carboxamide (3)
Anserine (3)
Histidine (3)
Hyocholic acid (3)
Nicotinamide N-oxide (3)
N2,N2-Dimethylguanosine (3)
Dimethylglycine (3)
Glycine (3)
Glycerol (3)
Betaine (3)
Pyroglutamic acid (3)
N-Acetylhistidine (3)
L-Aspartic acid (3)

First Public Date

2024 (35)
2023 (30)
2014 (28)
2021 (25)
2025 (24)
2026 (22)
2022 (20)
2020 (15)
2019 (12)
2017 (10)
2018 (9)
2016 (8)
2015 (4)
2013 (2)

Study status

Completed (41)
Recruiting (34)
Not yet recruiting (18)
Terminated (7)
Not provided (7)
Active, not recruiting (6)
Ongoing (1)
Enrolling by invitation (1)
Withdrawn (1)

Lab affiliation

Department of Biochemistry and Microbiology, University of Chemistry and Technology Prague (2)
CNRS-IPHC-LSMBO (1)
Charles Perkins Centre, School of Medical Sciences, University of Sydney, Sydney, Australia. (1)
Dental Research Center, University of Bern, Switzerland (1)
Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte – MG, CEP: 31270-901, Brazil. (1)
Department of Diagnosis and Surgery, School of Dentistry at Araraquara, Sao Paulo State University - UNESP, Araraquara, São Paulo, Brazil (1)
Department of Immunology, Xiangya School of Basic Medicine，Central South University, China (1)
Department of Oral Surgery and Pathology, School of Dentistry, Federal University of Minas Gerais (1)
Department of Orthopaedic Surgery School of Medicine University of California San Diego 9500 Gilman Drive MC0863 La Jolla, CA, USA (1)
Department of Otorhinolaryngology – Head and Neck Surgery, University of Helsinki and Helsinki University Hospital, Helsinki 00130, Finland and Department of Biosciences and Nutrition, Karolinska Institutet, Stockholm 11382, Sweden (1)
Guanghua school of stomatolgy, Hospital of stomatology, Sun Yat-sen university (1)
Laboratory of Biopolymers Structure, Intercollegiate Faculty of Biotechnology of University of Gdańsk and Medical University of Gdańsk, Poland (1)
State Key Laboratory of Oral Diseases & National Clinical Research Center for Oral Diseases & National Engineering Laboratory for Oral Regenerative Medicine & Department of Oral and Maxillofacial Surgery, West China Hospital of Stomatology, Sichuan University (1)
University Medicine Greifswald Interfaculty Institute for Genetics and Functional Genomics Department of Functional Genomics Friedrich-Ludwig-Jahn-Str. 15a 17475 Greifswald, Germany (1)
Wellcome Trust, MRC Institute of Metabolic Science, Cambridge University (1)

Keyword

Metronidazole (3)
Anti-Bacterial Agents (3)
Capecitabine (3)
Artesunate (2)
Mechanical bowel preparation (2)
Nutrition (2)
Gentamicins (2)
Ornidazole (2)
Sennosides (2)
Mechanical Bowel Preparation (MBP) (2)
Oral antibiotics (2)
Laparoscopic surgery (2)
Laparoscopy (2)
Colorectal surgery (2)
Leucovorin (2)
Fluorouracil (2)
Immune metabolism (1)
Streptomycin (1)
Oral alimentation following colorectal surgery (1)
Hospitalization stay (1)
Taxol (1)
Early oral feeding (1)
Tasigna (1)
Peritoneal Carcinomatosis Index (PCI) (1)
Cytoreductive surgery (CRS) (1)
Necrosis (1)
Ki-67 (1)
PERIOLIMEL N4E, emulsion for infusion (1)
Transanal endoscopic surgery (1)
TAMIS (1)

IsPrivate

False (1)

Classification

bacteria (3)
viruses (1)

Study type

Transcription profiling by array (520)
RNA-seq of coding RNA (104)
Interventional (102)
Unknown experiment type (35)
ChIP-chip by tiling array (30)
Comparative genomic hybridization by array (25)
RNA-seq of non coding RNA (24)
Other (16)
ChIP-seq (14)
Methylation profiling by array (13)
Observational (10)
Transcription profiling by SAGE (6)
Transcription profiling by tiling array (6)
Animal - High-throughput sequencing (4)
Transcription profiling by RT-PCR (4)
RNA-seq of coding RNA from single cells (3)
Observational patient registry (3)
Genotyping by array (2)
Proteomic profiling by array (2)
Methylation profiling by high throughput sequencing (2)
Proteomic profiling by mass spectrometer (1)
RNAi profiling by array (1)
MicroRNA profiling by high throughput sequencing (1)
Spatial transcriptomics by high-throughput sequencing (1)
MicroRNA profiling by array (1)
RNA-seq of total RNA (1)
Other (1)

Release Date

2022 (2115)
2025 (2045)
2023 (1801)
2021 (1748)
2024 (1511)
2020 (1220)
2019 (855)
2018 (685)
2017 (608)
2015 (564)
2016 (495)
2014 (394)
2026 (341)
2013 (314)
2012 (253)
2010 (195)
2011 (186)
2009 (78)
2008 (71)
2007 (33)
2005 (17)
2004 (17)
2006 (12)
2002 (8)
2003 (6)
1998 (4)
2001 (2)
2000 (2)
1999 (2)
1988 (1)

Location

Australia (19)
China (16)
Japan (14)
United States (11)
United Kingdom (10)
South Korea (9)
New Zealand (8)
France (7)
India (6)
Germany (5)
Spain (5)
Netherlands (5)
Iran (4)
Brazil (4)
Canada (4)
Finland (3)
Thailand (3)
Italy (3)
Portugal (2)
Greece (2)
Russia (2)
Israel (2)
Belgium (2)
Switzerland (2)
Panama (1)
Serbia and Montenegro (1)
South Africa (1)
Hong Kong (1)
Norway (1)
Ireland (1)

Previous page
1 / 1603
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 1603
Next page

Sort by:

Relevance

Page size

Oral dysbiosis initiates periodontal disease in experimental kidney disease

BACKGROUND AND HYPOTHESIS: It is presently unclear why there is a high prevalence of periodontal disease in individuals living with chronic kidney disease. Whilst some have argued that periodontal disease causes chronic kidney disease, we hypothesized that alterations in saliva ...

2025-09-04 | MTBLS1833 | MetaboLights

Serum miRNA profiles of patients with oral cancer and pre-cancer

The aim of this study was to examine the expression profiles of circulating miRNAs in the serum of patients with high-risk oral lesions (HRLs; oral cancer or carcinoma in situ) and to explore their utility as potential oral cancer biomarkers. Global serum miRNA profiles were generated by quantitativ...

ORGANISM(S): Homo sapiens

2013-04-15 | E-GEOD-37472 | biostudies-arrayexpress

Gene methylation profiles in offspring born before vs. after maternal bariatric surgery

Evaluate differences in gene methylation levels between offspring born after maternal bariatric surgery and their siblings born before surgery Offspring born after maternal bariatric surgery (AMS, N=25) vs. offspring born before maternal surgery (BMS, N=25)

ORGANISM(S): Homo sapiens

2013-05-16 | E-GEOD-44798 | biostudies-arrayexpress

Gene expression profile in offspring born before vs. after maternal bariatric surgery

Evaluate differences in gene expression levels between offspring born after maternal bariatric surgery and their siblings born before surgery Offspring born after maternal bariatric surgery (AMS, N=23) vs. offspring born before maternal surgery (BMS, N=23)

ORGANISM(S): Homo sapiens

2013-05-16 | E-GEOD-44407 | biostudies-arrayexpress

Gene expression profiling of oral squamous cell carcinoma

Oral squamous cell carcinoma (OSCC) is a solid neoplasm exhibiting aggressive tumor phenotypes with unpredictable biological behavior and usually a very unfavorable prognosis. The comprehension of the molecular basis of the variability within this cancer disease should lead to the development of sat...

ORGANISM(S): Homo sapiens

2010-05-15 | E-GEOD-9792 | biostudies-arrayexpress

OSCC Illumina GoldenGate Methylation

This study aims to compare the DNA methylome across a large cohort of oral squamous cell carcinoma and matched normal samples. DNA from 44 OSCCs and paired normal mucosa were analysed using Illumina GoldenGate methylation array. This data was correlated with extracapsular spread (extracapsular sprea...

ORGANISM(S): Homo sapiens

2013-08-02 | E-MTAB-1298 | biostudies-arrayexpress

Epigenome analysis of samples from oral cancer and oral leukoplakias patients

Genome wide DNA methylation profiling in oral cancer and oral leukoplakia patients. The cohort included 48 patients in total, with control, oral leukoplakia patients and oral cancer patients. The Infinium MethylationEPIC BeadChips 850K has been used to interrogate DNA methylation changes.

ORGANISM(S): Homo sapiens

2022-09-30 | E-MTAB-12202 | biostudies-arrayexpress

Expression data from primary tissue, human oral mucosa (mRNA data)

The experiment aims to identify regulatory miRNA networks influencing mRNA profiles in oral lichen planus (OLP). RNA and miRNA were extracted simultaneously using miRVana (Ambion, Life Technologies). Sample and array processing was carried out according to the manufacturer's guidelines. Affymetrix r...

ORGANISM(S): Homo sapiens

2013-05-06 | E-GEOD-38616 | biostudies-arrayexpress

Oral microbiome changes in subjects with obesity following bariatric surgery compared to lean counterparts

oral microbiome in obese following bariatric surgery

PRJEB75645 | ENA

Gene expression profiles of oral normal fibroblasts (NFs) and oral carcinoma-associated fibroblasts (CAFs)

This study aims to identify genes differentially expressed in oral CAFs with respect to their normal counterparts, i.e. oral NFs. We collected oral normal mucosal tissues and oral squamous cell carcinoma (OSCC) tissues from 12 healthy people and 12 OSCC patients, respectively, at West China Hospital...

ORGANISM(S): Homo sapiens

2012-01-26 | E-GEOD-35356 | biostudies-arrayexpress

Previous page
1 / 1603
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 1603
Next page

Sort by:

Relevance

Page size

16027 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

CHEBI ID

Metabolite Name

First Public Date

Study status

Lab affiliation

Tags

Keyword

IsPrivate

Classification

Study type

Release Date

Location

BACKGROUND AND HYPOTHESIS: It is presently unclear why there is a high prevalence of periodontal disease in individuals living with chronic kidney disease. Whilst some have argued that periodontal disease causes chronic kidney disease, we hypothesized that alterations in saliva ...

OmicsDI is part of the ELIXIR infrastructure

Tweets