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MetabolomicsSerine Metabolism Tunes Immune Responses To Promote Oreochromis niloticus Survival upon Edwardsiella tarda Infection
Overactive immune response is a critical factor triggering host death upon bacterial infection. However, the mechanism behind the regulation of excessive immune responses is still largely unknown, and the corresponding control and preventive measures are also to be explored. In this study, we find t...
2021-08-18 | MTBLS2974 | MetaboLights
MetabolomicsFecal microbiota transplantation treatment maintains post antibiotics gut function by change the gut microbiome and fecal metabolome to reduce gut inflammation and oxidative stress in nile tilapia (Oreochromis niloticus)
The imbalance of intestinal flora can affect the immune function and structural integrity of the intestinal barrier, leading to the colonization and reproduction of opportunistic pathogenic bacteria in the intestine to become the dominant flora, eventually inducing enteritis. This study aimed to inv...
2024-03-26 | MTBLS9451 | MetaboLights
GenomicsMapping active promoters by ChIP-seq profiling of H3K4me3 in cichlid fish - a first step to uncover cis-regulatory elements in ecological model teleosts
Evolutionary alterations to cis-regulatory sequences are likely to cause adaptive phenotypic complexity, through orchestrating changes in cellular proliferation, identity and communication. For non-model organisms with adaptive key-innovations, patterns of regulatory evolution have been predominantl...
ORGANISM(S): Oreochromis niloticus 
2015-07-07 | E-GEOD-62791 | biostudies-arrayexpress
TranscriptomicsTranscriptome sequencing of Nile tilapia hepatopancreas in different salinity
In this study, RNA-Seq was used to reveal the differences of molecular pathways in hepatopancreas of O. niloticus adapated to water with salinity of 8 or 16 practical salinity (psu), respectively, with fish at freshwater as the control,. Significantly changed pathways were mainly related to lipid m...
ORGANISM(S): Oreochromis niloticus 
2015-10-31 | E-GEOD-67671 | biostudies-arrayexpress
GenomicsOreochromis niloticus niloticus
Oreochromis niloticus niloticus Raw sequence reads
PRJNA729911 | ENA
ProteomicsDevelopment and proteome characterisation of muscle cell culture derived from Genetically improved farmed tilapia, Oreochromis niloticus (Linnaeus,1758)
A quantitative proteomics approach was used to investigate in Oreochromis niloticus cell line across two passages P10, and P20. A cell line developed from the muscle tissue of O. niloticus (ONM) was utilized to understand the proteome in-depth. Comparative proteome analysis was performed for ONM mu...
ORGANISM(S): Oreochromis niloticus 
2026-04-23 | PXD060219 | Pride
Oreochromis niloticus Muscle cell culture Myogenesis Lc-ms/ms 
GenomicsOreochromis niloticus
Oreochromis niloticus Raw sequence reads
PRJNA976967 | ENA
GenomicsOreochromis niloticus
Oreochromis niloticus Raw sequence reads
PRJNA976970 | ENA
GenomicsOreochromis niloticus
Oreochromis niloticus microRNA annotation
PRJNA221867 | ENA
GenomicsOreochromis niloticus
Oreochromis niloticus Raw sequence reads
PRJNA397818 | ENA
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