Sort   by:  
 Page size 
ProteomicsDiscovery of lincRNA-encoded Peptides: An Integrated Transcriptomics, Proteomics and Bioinformatics Approach
Long noncoding RNA (lncRNA) refers to the family of RNA transcripts with more than 200 nucleotides in length, but cannot encode proteins. lincRNA (long intergenic noncoding RNA) is a subset of lncRNA that do not overlap with known genes. Increasing evidences have shown that some of these transcripts...
ORGANISM(S): Mus musculus (Mouse) 
2020-05-12 | PXD013892 | Pride
Noncoding Micropeptide Orf prediction Sorf Lncrna Lincrna peptide Lincrna 
UnknownAnalysis of Fowl Adenovirus 4 Transcriptome by De Novo ORF Prediction Based on Corrected Nanopore Full-Length cDNA Sequencing Data.
Not available
S-EPMC9962806 | biostudies-literature
UnknownLncCat: An ORF attention model to identify LncRNA based on ensemble learning strategy and fused sequence information.
Not available
S-EPMC9941877 | biostudies-literature
TranscriptomicsIdentification of small ORFs in vertebrates using ribosome footprinting and evolutionary conservation
Identification of the coding elements in the genome is a fundamental step to understanding the building blocks of living systems. Short peptides (< 100 aa) have emerged as important regulators of development and physiology, but their identification has been limited by their size. We have leveraged t...
ORGANISM(S): Danio rerio 
2014-04-04 | E-GEOD-53693 | biostudies-arrayexpress
UnknownPreoperative Prediction of Microvascular Invasion of Hepatocellular Carcinoma: Radiomics Algorithm Based on Ultrasound Original Radio Frequency Signals.
Not available
S-EPMC6868049 | biostudies-literature
UnknownPan-genomic open reading frames: A potential supplement of single nucleotide polymorphisms in estimation of heritability and genomic prediction.
Not available
S-EPMC7470747 | biostudies-literature
ModelsDeshpande2019 - Random Forest model to predict long non-coding RNAs from coding RNAs in Zea Mays plant transcriptomic data
This is a Random Forest algorithm-based machine learning model to predict lncRNAs from coding mRNAs in plant transcriptomic data. The model assigns 1 for coding sequences and 2 for long non-coding sequences. The prediction is performed using a combination of Open Reading Frame (ORF) based, Sequence-...
2024-12-09 | BIOMD0000001067 | BioModels
Machine Learning Model FAIR-AIML 
UnknownReduce manual curation by combining gene predictions from multiple annotation engines, a case study of start codon prediction.
Not available
S-EPMC3651085 | biostudies-literature
UnknownBayesian prediction of RNA translation from ribosome profiling.
Not available
S-EPMC5389577 | biostudies-literature
UnknownMycoplasma hyopneumoniae transcription unit organization: genome survey and prediction.
Not available
S-EPMC3223074 | biostudies-literature
Sort   by:  
 Page size